Gene annotation
Transcriptome id Sobic.006G242100.1
Synonym Sb06g030810, I14H, IRX14-L
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
glycosyltransferase family 43 protein, putative, expressed
UniProt C5Y942 , Q50HV6
Pfam PF03360
Panther DB PTHR10896 PTHR10896:SF24
NCBI CDD KOG1476; Beta-1,3-glucuronyltransferase B3GAT1/SQV-8
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0015018galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G67230 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os04g55670.1 : glycosyltransferase family 43 protein, putative, expressed
MaizeGDB (Corn) Zm00025a021323 , Zm00025a009522 , Zm00025a057209
Brachypodium KQJ85012
Barley HORVU2Hr1G113350.3 , HORVU2Hr1G113350.4 , HORVU2Hr1G113350.2
Wheat TraesCS2D02G512800 , TraesCS2B02G539600
Populus -


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cDNA sequences
Sobic.006G242100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G172100 serine/threonine-protein kinase, putative, expressed -
2 Sobic.001G294400 CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
3 Sobic.003G095400 glycosyltransferase protein, putative, expressed -
4 Sobic.002G372800 tyrosine protein kinase domain containing protein, putative, expressed -
5 Sobic.003G353400 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
6 Sobic.004G111100 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.001G038200 leaf senescence related protein, putative, expressed -
8 Sobic.009G194200 CSLC7 - cellulose synthase-like family C, expressed -
9 Sobic.009G220200 exostosin family domain containing protein, expressed -
10 Sobic.004G264600 expressed protein -
11 Sobic.001G063500 fasciclin domain containing protein, expressed -
12 Sobic.003G127100 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.004G257800 chloride transporter, chloride channel family, putative, expressed -
14 Sobic.010G101900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
15 Sobic.010G069900 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
16 Sobic.002G270000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BAG domain-containing protein, putative, expressed -
17 Sobic.007G137300 myb-like DNA-binding domain containing protein, expressed -
18 Sobic.010G008600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLD2 - cellulose synthase-like family D, expressed -
19 Sobic.008G168100 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
20 Sobic.001G113700 cytochrome b561, putative, expressed K08360: cytochrome b-561


Gene co-expression network
sample Sobic006G242100 Sobic006G242100 Sobic004G172100 Sobic004G172100 Sobic006G242100--Sobic004G172100 Sobic001G294400 Sobic001G294400 Sobic006G242100--Sobic001G294400 Sobic003G095400 Sobic003G095400 Sobic006G242100--Sobic003G095400 Sobic002G372800 Sobic002G372800 Sobic006G242100--Sobic002G372800 Sobic003G353400 Sobic003G353400 Sobic006G242100--Sobic003G353400 Sobic004G111100 Sobic004G111100 Sobic006G242100--Sobic004G111100 Sobic001G038200 Sobic001G038200 Sobic006G242100--Sobic001G038200 Sobic009G194200 Sobic009G194200 Sobic006G242100--Sobic009G194200 Sobic009G220200 Sobic009G220200 Sobic006G242100--Sobic009G220200 Sobic004G172100--Sobic006G242100 Sobic004G172100--Sobic003G095400 Sobic009G030200 Sobic009G030200 Sobic004G172100--Sobic009G030200 Sobic006G087900 Sobic006G087900 Sobic004G172100--Sobic006G087900 Sobic009G102600 Sobic009G102600 Sobic004G172100--Sobic009G102600 Sobic003G278700 Sobic003G278700 Sobic004G172100--Sobic003G278700 Sobic009G099000 Sobic009G099000 Sobic004G172100--Sobic009G099000 Sobic004G257800 Sobic004G257800 Sobic004G172100--Sobic004G257800 Sobic004G172100--Sobic001G294400 Sobic001G294400--Sobic006G242100 Sobic004G212300 Sobic004G212300 Sobic001G294400--Sobic004G212300 Sobic010G069900 Sobic010G069900 Sobic001G294400--Sobic010G069900 Sobic001G084100 Sobic001G084100 Sobic001G294400--Sobic001G084100 Sobic010G071400 Sobic010G071400 Sobic001G294400--Sobic010G071400 Sobic010G052200 Sobic010G052200 Sobic001G294400--Sobic010G052200 Sobic001G294400--Sobic004G172100 Sobic005G142300 Sobic005G142300 Sobic001G294400--Sobic005G142300 Sobic001G294400--Sobic009G102600 Sobic003G095400--Sobic004G172100 Sobic004G078800 Sobic004G078800 Sobic003G095400--Sobic004G078800 Sobic003G095400--Sobic006G087900 Sobic003G095400--Sobic010G069900 Sobic010G236500 Sobic010G236500 Sobic003G095400--Sobic010G236500 Sobic003G095400--Sobic006G242100 Sobic003G095400--Sobic001G294400 Sobic006G076201 Sobic006G076201 Sobic003G095400--Sobic006G076201 Sobic003G095400--Sobic009G102600 Sobic007G009500 Sobic007G009500 Sobic002G372800--Sobic007G009500 Sobic003G127100 Sobic003G127100 Sobic002G372800--Sobic003G127100 Sobic001G108350 Sobic001G108350 Sobic002G372800--Sobic001G108350 Sobic002G372800--Sobic004G257800 Sobic005G110490 Sobic005G110490 Sobic002G372800--Sobic005G110490 Sobic001G063600 Sobic001G063600 Sobic002G372800--Sobic001G063600 Sobic002G325900 Sobic002G325900 Sobic002G372800--Sobic002G325900 Sobic002G372800--Sobic006G242100 Sobic010G008600 Sobic010G008600 Sobic002G372800--Sobic010G008600 Sobic004G337900 Sobic004G337900 Sobic003G353400--Sobic004G337900 Sobic001G099100 Sobic001G099100 Sobic003G353400--Sobic001G099100 Sobic007G225300 Sobic007G225300 Sobic003G353400--Sobic007G225300 Sobic003G353400--Sobic006G242100 Sobic003G353400--Sobic009G030200 Sobic007G178200 Sobic007G178200 Sobic003G353400--Sobic007G178200 Sobic003G319000 Sobic003G319000 Sobic003G353400--Sobic003G319000 Sobic010G050900 Sobic010G050900 Sobic003G353400--Sobic010G050900 Sobic003G312400 Sobic003G312400 Sobic003G353400--Sobic003G312400 Sobic010G101900 Sobic010G101900 Sobic004G111100--Sobic010G101900 Sobic007G047300 Sobic007G047300 Sobic004G111100--Sobic007G047300 Sobic003G254700 Sobic003G254700 Sobic004G111100--Sobic003G254700 Sobic009G162300 Sobic009G162300 Sobic004G111100--Sobic009G162300 Sobic003G227700 Sobic003G227700 Sobic004G111100--Sobic003G227700 Sobic001G360700 Sobic001G360700 Sobic004G111100--Sobic001G360700 Sobic002G207200 Sobic002G207200 Sobic004G111100--Sobic002G207200 Sobic001G072600 Sobic001G072600 Sobic004G111100--Sobic001G072600 Sobic009G034300 Sobic009G034300 Sobic004G111100--Sobic009G034300 Sobic001G038200--Sobic006G242100 Sobic002G279600 Sobic002G279600 Sobic001G038200--Sobic002G279600 Sobic001G038200--Sobic010G008600 Sobic001G038200--Sobic009G194200 Sobic001G038200--Sobic003G095400 Sobic002G159900 Sobic002G159900 Sobic001G038200--Sobic002G159900 Sobic006G129000 Sobic006G129000 Sobic001G038200--Sobic006G129000 Sobic001G038200--Sobic003G319000 Sobic001G038200--Sobic003G312400 Sobic009G194200--Sobic010G008600 Sobic001G436100 Sobic001G436100 Sobic009G194200--Sobic001G436100 Sobic004G261200 Sobic004G261200 Sobic009G194200--Sobic004G261200 Sobic003G410700 Sobic003G410700 Sobic009G194200--Sobic003G410700 Sobic001G061900 Sobic001G061900 Sobic009G194200--Sobic001G061900 Sobic009G194200--Sobic006G242100 Sobic004G262600 Sobic004G262600 Sobic009G194200--Sobic004G262600 Sobic010G101400 Sobic010G101400 Sobic009G194200--Sobic010G101400 Sobic009G194200--Sobic001G038200 Sobic009G208800 Sobic009G208800 Sobic009G220200--Sobic009G208800 Sobic003G296700 Sobic003G296700 Sobic009G220200--Sobic003G296700 Sobic001G051800 Sobic001G051800 Sobic009G220200--Sobic001G051800 Sobic001G516600 Sobic001G516600 Sobic009G220200--Sobic001G516600 Sobic001G173300 Sobic001G173300 Sobic009G220200--Sobic001G173300 Sobic004G257300 Sobic004G257300 Sobic009G220200--Sobic004G257300 Sobic002G374100 Sobic002G374100 Sobic009G220200--Sobic002G374100 Sobic002G362900 Sobic002G362900 Sobic009G220200--Sobic002G362900 Sobic007G188100 Sobic007G188100 Sobic009G220200--Sobic007G188100
Octagon: transcription factors


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