Gene annotation
Transcriptome id Sobic.001G038200.1
Synonym Sb01g003510, TBL33
Functional annotation leaf senescence related protein, putative, expressed
UniProt C5WV48
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40320 : TRICHOME BIREFRINGENCE-LIKE 33
RAP-DB (Rice) LOC_Os03g60350.1 : leaf senescence related protein, putative, expressed
MaizeGDB (Corn) Zm00025a008771 , Zm00025a008768
Brachypodium PNT73895 , KQK12470 , KQK12469
Barley HORVU1Hr1G059380.2 , HORVU1Hr1G059380.3 , HORVU1Hr1G059380.1 , HORVU1Hr1G059380.6 , HORVU1Hr1G059380.4 , HORVU1Hr1G059380.5
Wheat TraesCS5A02G473100 , TraesCS1D02G228100 , TraesCS5B02G486100 , TraesCS1A02G226700 , TraesCS5A02G473200 , TraesCS5A02G473200 , TraesCS5A02G473100 , TraesCS5B02G486000 , TraesCS5B02G486000 , TraesCS5D02G485800 , TraesCS1B02G240700 , TraesCS5D02G485900 , TraesCS5D02G485900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G242100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
2 Sobic.002G279600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.010G008600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLD2 - cellulose synthase-like family D, expressed -
4 Sobic.009G194200 CSLC7 - cellulose synthase-like family C, expressed -
5 Sobic.003G095400 glycosyltransferase protein, putative, expressed -
6 Sobic.002G159900 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
7 Sobic.006G129000 ATP/GTP binding protein, putative, expressed -
8 Sobic.003G319000 universal stress protein domain containing protein, putative, expressed -
9 Sobic.003G312400 dymeclin, putative, expressed -
10 Sobic.003G127100 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
12 Sobic.004G264600 expressed protein -
13 Sobic.004G117300 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
14 Sobic.001G061900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
15 Sobic.004G257800 chloride transporter, chloride channel family, putative, expressed -
16 Sobic.001G294400 CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
17 Sobic.009G167900 CAMK_CAMK_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.004G172100 serine/threonine-protein kinase, putative, expressed -
19 Sobic.009G112600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
20 Sobic.008G119400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -


Gene co-expression network
sample Sobic001G038200 Sobic001G038200 Sobic006G242100 Sobic006G242100 Sobic001G038200--Sobic006G242100 Sobic002G279600 Sobic002G279600 Sobic001G038200--Sobic002G279600 Sobic010G008600 Sobic010G008600 Sobic001G038200--Sobic010G008600 Sobic009G194200 Sobic009G194200 Sobic001G038200--Sobic009G194200 Sobic003G095400 Sobic003G095400 Sobic001G038200--Sobic003G095400 Sobic002G159900 Sobic002G159900 Sobic001G038200--Sobic002G159900 Sobic006G129000 Sobic006G129000 Sobic001G038200--Sobic006G129000 Sobic003G319000 Sobic003G319000 Sobic001G038200--Sobic003G319000 Sobic003G312400 Sobic003G312400 Sobic001G038200--Sobic003G312400 Sobic004G172100 Sobic004G172100 Sobic006G242100--Sobic004G172100 Sobic001G294400 Sobic001G294400 Sobic006G242100--Sobic001G294400 Sobic006G242100--Sobic003G095400 Sobic002G372800 Sobic002G372800 Sobic006G242100--Sobic002G372800 Sobic003G353400 Sobic003G353400 Sobic006G242100--Sobic003G353400 Sobic004G111100 Sobic004G111100 Sobic006G242100--Sobic004G111100 Sobic006G242100--Sobic001G038200 Sobic006G242100--Sobic009G194200 Sobic009G220200 Sobic009G220200 Sobic006G242100--Sobic009G220200 Sobic004G117300 Sobic004G117300 Sobic002G279600--Sobic004G117300 Sobic002G279600--Sobic001G038200 Sobic008G113800 Sobic008G113800 Sobic002G279600--Sobic008G113800 Sobic003G041700 Sobic003G041700 Sobic002G279600--Sobic003G041700 Sobic009G167900 Sobic009G167900 Sobic002G279600--Sobic009G167900 Sobic003G231900 Sobic003G231900 Sobic002G279600--Sobic003G231900 Sobic001G533200 Sobic001G533200 Sobic002G279600--Sobic001G533200 Sobic006G000400 Sobic006G000400 Sobic002G279600--Sobic006G000400 Sobic001G059900 Sobic001G059900 Sobic002G279600--Sobic001G059900 Sobic003G127100 Sobic003G127100 Sobic010G008600--Sobic003G127100 Sobic010G101400 Sobic010G101400 Sobic010G008600--Sobic010G101400 Sobic004G264600 Sobic004G264600 Sobic010G008600--Sobic004G264600 Sobic010G030900 Sobic010G030900 Sobic010G008600--Sobic010G030900 Sobic010G008600--Sobic009G194200 Sobic001G063600 Sobic001G063600 Sobic010G008600--Sobic001G063600 Sobic001G061900 Sobic001G061900 Sobic010G008600--Sobic001G061900 Sobic001G476400 Sobic001G476400 Sobic010G008600--Sobic001G476400 Sobic010G008600--Sobic002G372800 Sobic009G194200--Sobic010G008600 Sobic001G436100 Sobic001G436100 Sobic009G194200--Sobic001G436100 Sobic004G261200 Sobic004G261200 Sobic009G194200--Sobic004G261200 Sobic003G410700 Sobic003G410700 Sobic009G194200--Sobic003G410700 Sobic009G194200--Sobic001G061900 Sobic009G194200--Sobic006G242100 Sobic004G262600 Sobic004G262600 Sobic009G194200--Sobic004G262600 Sobic009G194200--Sobic010G101400 Sobic009G194200--Sobic001G038200 Sobic003G095400--Sobic004G172100 Sobic004G078800 Sobic004G078800 Sobic003G095400--Sobic004G078800 Sobic006G087900 Sobic006G087900 Sobic003G095400--Sobic006G087900 Sobic010G069900 Sobic010G069900 Sobic003G095400--Sobic010G069900 Sobic010G236500 Sobic010G236500 Sobic003G095400--Sobic010G236500 Sobic003G095400--Sobic006G242100 Sobic003G095400--Sobic001G294400 Sobic006G076201 Sobic006G076201 Sobic003G095400--Sobic006G076201 Sobic009G102600 Sobic009G102600 Sobic003G095400--Sobic009G102600 Sobic010G089500 Sobic010G089500 Sobic002G159900--Sobic010G089500 Sobic004G056400 Sobic004G056400 Sobic002G159900--Sobic004G056400 Sobic002G186900 Sobic002G186900 Sobic002G159900--Sobic002G186900 Sobic001G418000 Sobic001G418000 Sobic002G159900--Sobic001G418000 Sobic003G096000 Sobic003G096000 Sobic002G159900--Sobic003G096000 Sobic001G410200 Sobic001G410200 Sobic002G159900--Sobic001G410200 Sobic001G173300 Sobic001G173300 Sobic002G159900--Sobic001G173300 Sobic004G297300 Sobic004G297300 Sobic002G159900--Sobic004G297300 Sobic010G065900 Sobic010G065900 Sobic002G159900--Sobic010G065900 Sobic006G129000--Sobic003G312400 Sobic003G252900 Sobic003G252900 Sobic006G129000--Sobic003G252900 Sobic006G129000--Sobic004G056400 Sobic003G152700 Sobic003G152700 Sobic006G129000--Sobic003G152700 Sobic006G129000--Sobic001G418000 Sobic010G265900 Sobic010G265900 Sobic006G129000--Sobic010G265900 Sobic003G326800 Sobic003G326800 Sobic006G129000--Sobic003G326800 Sobic001G505500 Sobic001G505500 Sobic006G129000--Sobic001G505500 Sobic004G075100 Sobic004G075100 Sobic006G129000--Sobic004G075100 Sobic001G196100 Sobic001G196100 Sobic003G319000--Sobic001G196100 Sobic003G092700 Sobic003G092700 Sobic003G319000--Sobic003G092700 Sobic009G182200 Sobic009G182200 Sobic003G319000--Sobic009G182200 Sobic001G026600 Sobic001G026600 Sobic003G319000--Sobic001G026600 Sobic003G319000--Sobic003G252900 Sobic003G319000--Sobic003G312400 Sobic003G319000--Sobic001G418000 Sobic003G410400 Sobic003G410400 Sobic003G319000--Sobic003G410400 Sobic003G023500 Sobic003G023500 Sobic003G319000--Sobic003G023500 Sobic003G312400--Sobic003G252900 Sobic003G312400--Sobic003G410400 Sobic003G312400--Sobic003G319000 Sobic004G168300 Sobic004G168300 Sobic003G312400--Sobic004G168300 Sobic003G312400--Sobic003G092700 Sobic010G168900 Sobic010G168900 Sobic003G312400--Sobic010G168900 Sobic003G312400--Sobic006G129000 Sobic010G059700 Sobic010G059700 Sobic003G312400--Sobic010G059700 Sobic002G297600 Sobic002G297600 Sobic003G312400--Sobic002G297600
Octagon: transcription factors


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