Gene annotation
Transcriptome id Sobic.002G279600.1
Synonym Sb02g031230
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5X6V6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g36790.1 : expressed protein
MaizeGDB (Corn) Zm00025a049329
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G117300 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
2 Sobic.001G038200 leaf senescence related protein, putative, expressed -
3 Sobic.008G113800 expressed protein -
4 Sobic.003G041700 DNA mismatch repair protein MSH6-2, putative, expressed K08737: DNA mismatch repair protein MSH6
5 Sobic.009G167900 CAMK_CAMK_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.003G231900 mitotic checkpoint protein, putative, expressed K14298: RAE1, mRNA export factor
7 Sobic.001G533200 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.006G000400 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
9 Sobic.001G059900 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed -
10 Sobic.002G206700 -(PubMedID : 24813726)@CPuORF8 - conserved peptide uORF-containing transcript, expressed K01611: speD, S-adenosylmethionine decarboxylase
11 Sobic.004G180400 remorin family protein, putative, expressed -
12 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
13 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
14 Sobic.001G379500 expressed protein -
15 Sobic.010G177300 receptor-like protein kinase 2 precursor, putative, expressed -
16 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
17 Sobic.009G194900 glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed -
18 Sobic.003G273800 IQ calmodulin-binding motif domain containing protein, expressed -
19 Sobic.006G134200 expressed protein -
20 Sobic.010G088950 - -


Gene co-expression network
sample Sobic002G279600 Sobic002G279600 Sobic004G117300 Sobic004G117300 Sobic002G279600--Sobic004G117300 Sobic001G038200 Sobic001G038200 Sobic002G279600--Sobic001G038200 Sobic008G113800 Sobic008G113800 Sobic002G279600--Sobic008G113800 Sobic003G041700 Sobic003G041700 Sobic002G279600--Sobic003G041700 Sobic009G167900 Sobic009G167900 Sobic002G279600--Sobic009G167900 Sobic003G231900 Sobic003G231900 Sobic002G279600--Sobic003G231900 Sobic001G533200 Sobic001G533200 Sobic002G279600--Sobic001G533200 Sobic006G000400 Sobic006G000400 Sobic002G279600--Sobic006G000400 Sobic001G059900 Sobic001G059900 Sobic002G279600--Sobic001G059900 Sobic006G134200 Sobic006G134200 Sobic004G117300--Sobic006G134200 Sobic008G129200 Sobic008G129200 Sobic004G117300--Sobic008G129200 Sobic001G175000 Sobic001G175000 Sobic004G117300--Sobic001G175000 Sobic004G117300--Sobic003G041700 Sobic004G117300--Sobic002G279600 Sobic001G075400 Sobic001G075400 Sobic004G117300--Sobic001G075400 Sobic007G207700 Sobic007G207700 Sobic004G117300--Sobic007G207700 Sobic004G117300--Sobic008G113800 Sobic009G194900 Sobic009G194900 Sobic004G117300--Sobic009G194900 Sobic006G242100 Sobic006G242100 Sobic001G038200--Sobic006G242100 Sobic001G038200--Sobic002G279600 Sobic010G008600 Sobic010G008600 Sobic001G038200--Sobic010G008600 Sobic009G194200 Sobic009G194200 Sobic001G038200--Sobic009G194200 Sobic003G095400 Sobic003G095400 Sobic001G038200--Sobic003G095400 Sobic002G159900 Sobic002G159900 Sobic001G038200--Sobic002G159900 Sobic006G129000 Sobic006G129000 Sobic001G038200--Sobic006G129000 Sobic003G319000 Sobic003G319000 Sobic001G038200--Sobic003G319000 Sobic003G312400 Sobic003G312400 Sobic001G038200--Sobic003G312400 Sobic001G403200 Sobic001G403200 Sobic008G113800--Sobic001G403200 Sobic004G271500 Sobic004G271500 Sobic008G113800--Sobic004G271500 Sobic010G274000 Sobic010G274000 Sobic008G113800--Sobic010G274000 Sobic008G113800--Sobic003G041700 Sobic002G191000 Sobic002G191000 Sobic008G113800--Sobic002G191000 Sobic001G103000 Sobic001G103000 Sobic008G113800--Sobic001G103000 Sobic009G088200 Sobic009G088200 Sobic008G113800--Sobic009G088200 Sobic007G152900 Sobic007G152900 Sobic008G113800--Sobic007G152900 Sobic003G420100 Sobic003G420100 Sobic008G113800--Sobic003G420100 Sobic004G077100 Sobic004G077100 Sobic003G041700--Sobic004G077100 Sobic003G387600 Sobic003G387600 Sobic003G041700--Sobic003G387600 Sobic003G041700--Sobic001G403200 Sobic006G214000 Sobic006G214000 Sobic003G041700--Sobic006G214000 Sobic003G041700--Sobic001G075400 Sobic003G041700--Sobic008G113800 Sobic010G104400 Sobic010G104400 Sobic003G041700--Sobic010G104400 Sobic003G273800 Sobic003G273800 Sobic003G041700--Sobic003G273800 Sobic001G131300 Sobic001G131300 Sobic003G041700--Sobic001G131300 Sobic003G289800 Sobic003G289800 Sobic009G167900--Sobic003G289800 Sobic010G151700 Sobic010G151700 Sobic009G167900--Sobic010G151700 Sobic003G412800 Sobic003G412800 Sobic009G167900--Sobic003G412800 Sobic002G215200 Sobic002G215200 Sobic009G167900--Sobic002G215200 Sobic004G270800 Sobic004G270800 Sobic009G167900--Sobic004G270800 Sobic008G083500 Sobic008G083500 Sobic009G167900--Sobic008G083500 Sobic003G183700 Sobic003G183700 Sobic009G167900--Sobic003G183700 Sobic003G201000 Sobic003G201000 Sobic009G167900--Sobic003G201000 Sobic003G179500 Sobic003G179500 Sobic009G167900--Sobic003G179500 Sobic003G231900--Sobic003G273800 Sobic001G404000 Sobic001G404000 Sobic003G231900--Sobic001G404000 Sobic002G237700 Sobic002G237700 Sobic003G231900--Sobic002G237700 Sobic001G511200 Sobic001G511200 Sobic003G231900--Sobic001G511200 Sobic009G233600 Sobic009G233600 Sobic003G231900--Sobic009G233600 Sobic001G374800 Sobic001G374800 Sobic003G231900--Sobic001G374800 Sobic009G178900 Sobic009G178900 Sobic003G231900--Sobic009G178900 Sobic008G127200 Sobic008G127200 Sobic003G231900--Sobic008G127200 Sobic010G271000 Sobic010G271000 Sobic003G231900--Sobic010G271000 Sobic004G180400 Sobic004G180400 Sobic001G533200--Sobic004G180400 Sobic001G533200--Sobic004G077100 Sobic009G233500 Sobic009G233500 Sobic001G533200--Sobic009G233500 Sobic006G069500 Sobic006G069500 Sobic001G533200--Sobic006G069500 Sobic001G533200--Sobic003G273800 Sobic001G533200--Sobic003G041700 Sobic001G533200--Sobic009G178900 Sobic001G533200--Sobic004G117300 Sobic001G533200--Sobic008G113800 Sobic003G121500 Sobic003G121500 Sobic006G000400--Sobic003G121500 Sobic004G025200 Sobic004G025200 Sobic006G000400--Sobic004G025200 Sobic006G134001 Sobic006G134001 Sobic006G000400--Sobic006G134001 Sobic006G171400 Sobic006G171400 Sobic006G000400--Sobic006G171400 Sobic003G043700 Sobic003G043700 Sobic006G000400--Sobic003G043700 Sobic006G000400--Sobic008G113800 Sobic002G420200 Sobic002G420200 Sobic006G000400--Sobic002G420200 Sobic009G165300 Sobic009G165300 Sobic006G000400--Sobic009G165300 Sobic006G266300 Sobic006G266300 Sobic006G000400--Sobic006G266300 Sobic001G379500 Sobic001G379500 Sobic001G059900--Sobic001G379500 Sobic009G101100 Sobic009G101100 Sobic001G059900--Sobic009G101100 Sobic001G059900--Sobic003G273800 Sobic009G127800 Sobic009G127800 Sobic001G059900--Sobic009G127800 Sobic001G059900--Sobic003G041700 Sobic005G210600 Sobic005G210600 Sobic001G059900--Sobic005G210600 Sobic005G188400 Sobic005G188400 Sobic001G059900--Sobic005G188400 Sobic001G059900--Sobic002G237700 Sobic004G234500 Sobic004G234500 Sobic001G059900--Sobic004G234500
Octagon: transcription factors


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