Gene annotation
Transcriptome id Sobic.004G117300.1
Synonym Sb04g009770
Functional annotation prefoldin, putative, expressed
UniProt C5XZI6
Pfam PF05529
Panther DB PTHR12701 PTHR12701:SF17
NCBI CDD KOG1962; B-cell receptor-associated protein and related proteins
KEGG Orthology K14009; BCAP31, B-cell receptor-associated protein 31
Gene Ontology GO:0016021; integral component of membrane GO:0006886intracellular protein transport GO:0005783endoplasmic reticulum


Orthologs (automatic annotation)
TAIR AT5G42570 : B-cell receptor-associated 31-like
RAP-DB (Rice) LOC_Os02g21650.1 : prefoldin, putative, expressed
MaizeGDB (Corn) Zm00025a019880
Brachypodium KQK18343 , KQJ94500
Barley HORVU7Hr1G091920.1 , HORVU7Hr1G091920.2 , HORVU7Hr1G082730.1 , HORVU7Hr1G082730.3 , HORVU7Hr1G082730.2
Wheat TraesCS7A02G388300 , TraesCS7B02G290300 , TraesCS7A02G336100
Populus -


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cDNA sequences
Sobic.004G117300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G134200 expressed protein -
2 Sobic.008G129200 MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed K02210: MCM7, DNA replication licensing factor MCM7
3 Sobic.001G175000 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
4 Sobic.003G041700 DNA mismatch repair protein MSH6-2, putative, expressed K08737: DNA mismatch repair protein MSH6
5 Sobic.002G279600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G075400 expressed protein -
7 Sobic.007G207700 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
8 Sobic.008G113800 expressed protein -
9 Sobic.009G194900 glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed -
10 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
11 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
12 Sobic.006G179200 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
13 Sobic.006G116500 expressed protein -
14 Sobic.001G533200 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
16 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
17 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
18 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
19 Sobic.001G205000 ATEB1A-like microtubule associated protein, putative, expressed K10436: microtubule-associated protein, RP/EB family
20 Sobic.001G238900 OsFBX386 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G117300 Sobic004G117300 Sobic006G134200 Sobic006G134200 Sobic004G117300--Sobic006G134200 Sobic008G129200 Sobic008G129200 Sobic004G117300--Sobic008G129200 Sobic001G175000 Sobic001G175000 Sobic004G117300--Sobic001G175000 Sobic003G041700 Sobic003G041700 Sobic004G117300--Sobic003G041700 Sobic002G279600 Sobic002G279600 Sobic004G117300--Sobic002G279600 Sobic001G075400 Sobic001G075400 Sobic004G117300--Sobic001G075400 Sobic007G207700 Sobic007G207700 Sobic004G117300--Sobic007G207700 Sobic008G113800 Sobic008G113800 Sobic004G117300--Sobic008G113800 Sobic009G194900 Sobic009G194900 Sobic004G117300--Sobic009G194900 Sobic003G328500 Sobic003G328500 Sobic006G134200--Sobic003G328500 Sobic003G387700 Sobic003G387700 Sobic006G134200--Sobic003G387700 Sobic006G134200--Sobic007G207700 Sobic004G257600 Sobic004G257600 Sobic006G134200--Sobic004G257600 Sobic007G100600 Sobic007G100600 Sobic006G134200--Sobic007G100600 Sobic006G134200--Sobic001G075400 Sobic001G177900 Sobic001G177900 Sobic006G134200--Sobic001G177900 Sobic010G105400 Sobic010G105400 Sobic006G134200--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic006G134200--Sobic005G144600 Sobic004G331600 Sobic004G331600 Sobic008G129200--Sobic004G331600 Sobic009G087000 Sobic009G087000 Sobic008G129200--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic008G129200--Sobic005G110535 Sobic001G456500 Sobic001G456500 Sobic008G129200--Sobic001G456500 Sobic010G147700 Sobic010G147700 Sobic008G129200--Sobic010G147700 Sobic003G183700 Sobic003G183700 Sobic008G129200--Sobic003G183700 Sobic001G083300 Sobic001G083300 Sobic008G129200--Sobic001G083300 Sobic010G054600 Sobic010G054600 Sobic008G129200--Sobic010G054600 Sobic006G116500 Sobic006G116500 Sobic008G129200--Sobic006G116500 Sobic006G179200 Sobic006G179200 Sobic001G175000--Sobic006G179200 Sobic002G246900 Sobic002G246900 Sobic001G175000--Sobic002G246900 Sobic001G521100 Sobic001G521100 Sobic001G175000--Sobic001G521100 Sobic001G175000--Sobic010G105400 Sobic002G113400 Sobic002G113400 Sobic001G175000--Sobic002G113400 Sobic001G175000--Sobic006G134200 Sobic001G175000--Sobic004G117300 Sobic003G134500 Sobic003G134500 Sobic001G175000--Sobic003G134500 Sobic004G047100 Sobic004G047100 Sobic001G175000--Sobic004G047100 Sobic004G077100 Sobic004G077100 Sobic003G041700--Sobic004G077100 Sobic003G387600 Sobic003G387600 Sobic003G041700--Sobic003G387600 Sobic001G403200 Sobic001G403200 Sobic003G041700--Sobic001G403200 Sobic006G214000 Sobic006G214000 Sobic003G041700--Sobic006G214000 Sobic003G041700--Sobic001G075400 Sobic003G041700--Sobic008G113800 Sobic010G104400 Sobic010G104400 Sobic003G041700--Sobic010G104400 Sobic003G273800 Sobic003G273800 Sobic003G041700--Sobic003G273800 Sobic001G131300 Sobic001G131300 Sobic003G041700--Sobic001G131300 Sobic002G279600--Sobic004G117300 Sobic001G038200 Sobic001G038200 Sobic002G279600--Sobic001G038200 Sobic002G279600--Sobic008G113800 Sobic002G279600--Sobic003G041700 Sobic009G167900 Sobic009G167900 Sobic002G279600--Sobic009G167900 Sobic003G231900 Sobic003G231900 Sobic002G279600--Sobic003G231900 Sobic001G533200 Sobic001G533200 Sobic002G279600--Sobic001G533200 Sobic006G000400 Sobic006G000400 Sobic002G279600--Sobic006G000400 Sobic001G059900 Sobic001G059900 Sobic002G279600--Sobic001G059900 Sobic001G075400--Sobic003G328500 Sobic001G075400--Sobic004G077100 Sobic001G075400--Sobic001G177900 Sobic001G075400--Sobic006G134200 Sobic009G233500 Sobic009G233500 Sobic001G075400--Sobic009G233500 Sobic001G075400--Sobic007G207700 Sobic002G313000 Sobic002G313000 Sobic001G075400--Sobic002G313000 Sobic005G016300 Sobic005G016300 Sobic001G075400--Sobic005G016300 Sobic001G075400--Sobic001G131300 Sobic007G207700--Sobic003G328500 Sobic007G207700--Sobic006G134200 Sobic007G207700--Sobic005G016300 Sobic007G017700 Sobic007G017700 Sobic007G207700--Sobic007G017700 Sobic007G207700--Sobic001G075400 Sobic007G207700--Sobic006G179200 Sobic001G091500 Sobic001G091500 Sobic007G207700--Sobic001G091500 Sobic005G210600 Sobic005G210600 Sobic007G207700--Sobic005G210600 Sobic007G207700--Sobic002G313000 Sobic008G113800--Sobic001G403200 Sobic004G271500 Sobic004G271500 Sobic008G113800--Sobic004G271500 Sobic010G274000 Sobic010G274000 Sobic008G113800--Sobic010G274000 Sobic008G113800--Sobic003G041700 Sobic002G191000 Sobic002G191000 Sobic008G113800--Sobic002G191000 Sobic001G103000 Sobic001G103000 Sobic008G113800--Sobic001G103000 Sobic009G088200 Sobic009G088200 Sobic008G113800--Sobic009G088200 Sobic007G152900 Sobic007G152900 Sobic008G113800--Sobic007G152900 Sobic003G420100 Sobic003G420100 Sobic008G113800--Sobic003G420100 Sobic001G261549 Sobic001G261549 Sobic009G194900--Sobic001G261549 Sobic002G351100 Sobic002G351100 Sobic009G194900--Sobic002G351100 Sobic006G102900 Sobic006G102900 Sobic009G194900--Sobic006G102900 Sobic003G107200 Sobic003G107200 Sobic009G194900--Sobic003G107200 Sobic001G255600 Sobic001G255600 Sobic009G194900--Sobic001G255600 Sobic009G194900--Sobic006G134200 Sobic002G230800 Sobic002G230800 Sobic009G194900--Sobic002G230800 Sobic009G194900--Sobic002G246900 Sobic009G194900--Sobic004G047100
Octagon: transcription factors


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