Gene annotation
Transcriptome id Sobic.008G113800.1
Synonym Sb08g016770
Functional annotation expressed protein
UniProt A0A1B6PD72
Pfam -
Panther DB PTHR13140
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g34500.1 : expressed protein
MaizeGDB (Corn) Zm00025a006912
Brachypodium KQJ86513
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G403200 receptor-like kinase RHG1, putative, expressed -
2 Sobic.004G271500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
3 Sobic.010G274000 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
4 Sobic.003G041700 DNA mismatch repair protein MSH6-2, putative, expressed K08737: DNA mismatch repair protein MSH6
5 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
6 Sobic.001G103000 DNA binding protein, putative, expressed -
7 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
8 Sobic.007G152900 POLE2A - Putative DNA polymerase epsilon complex subunit, expressed K02325: DNA polymerase epsilon subunit 2
9 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
10 Sobic.002G094600 "CESA6-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@"cellulose synthase A2, incorporate UDP-sugars into cellulose"(PubMedID : 28944535)@CESA6 - cellulose synthase, expressed K10999: cellulose synthase A
11 Sobic.004G355500 RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
12 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
13 Sobic.006G102900 expressed protein -
14 Sobic.002G280700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
15 Sobic.004G197400 expressed protein K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
16 Sobic.006G035600 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
17 Sobic.003G294500 dynamin family protein, putative, expressed -
18 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
19 Sobic.001G070300 expressed protein -
20 Sobic.006G000400 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9


Gene co-expression network
sample Sobic008G113800 Sobic008G113800 Sobic001G403200 Sobic001G403200 Sobic008G113800--Sobic001G403200 Sobic004G271500 Sobic004G271500 Sobic008G113800--Sobic004G271500 Sobic010G274000 Sobic010G274000 Sobic008G113800--Sobic010G274000 Sobic003G041700 Sobic003G041700 Sobic008G113800--Sobic003G041700 Sobic002G191000 Sobic002G191000 Sobic008G113800--Sobic002G191000 Sobic001G103000 Sobic001G103000 Sobic008G113800--Sobic001G103000 Sobic009G088200 Sobic009G088200 Sobic008G113800--Sobic009G088200 Sobic007G152900 Sobic007G152900 Sobic008G113800--Sobic007G152900 Sobic003G420100 Sobic003G420100 Sobic008G113800--Sobic003G420100 Sobic002G020500 Sobic002G020500 Sobic001G403200--Sobic002G020500 Sobic001G403200--Sobic004G271500 Sobic001G403200--Sobic003G041700 Sobic010G104400 Sobic010G104400 Sobic001G403200--Sobic010G104400 Sobic001G403200--Sobic008G113800 Sobic003G151900 Sobic003G151900 Sobic001G403200--Sobic003G151900 Sobic001G314000 Sobic001G314000 Sobic001G403200--Sobic001G314000 Sobic001G038400 Sobic001G038400 Sobic001G403200--Sobic001G038400 Sobic006G009500 Sobic006G009500 Sobic001G403200--Sobic006G009500 Sobic004G271500--Sobic001G403200 Sobic004G271500--Sobic002G191000 Sobic010G176800 Sobic010G176800 Sobic004G271500--Sobic010G176800 Sobic001G029800 Sobic001G029800 Sobic004G271500--Sobic001G029800 Sobic009G079900 Sobic009G079900 Sobic004G271500--Sobic009G079900 Sobic002G158900 Sobic002G158900 Sobic004G271500--Sobic002G158900 Sobic004G271500--Sobic001G314000 Sobic004G271500--Sobic002G020500 Sobic001G144200 Sobic001G144200 Sobic004G271500--Sobic001G144200 Sobic001G070300 Sobic001G070300 Sobic010G274000--Sobic001G070300 Sobic009G181500 Sobic009G181500 Sobic010G274000--Sobic009G181500 Sobic005G144600 Sobic005G144600 Sobic010G274000--Sobic005G144600 Sobic010G274000--Sobic002G191000 Sobic001G078600 Sobic001G078600 Sobic010G274000--Sobic001G078600 Sobic004G197400 Sobic004G197400 Sobic010G274000--Sobic004G197400 Sobic007G100600 Sobic007G100600 Sobic010G274000--Sobic007G100600 Sobic006G102900 Sobic006G102900 Sobic010G274000--Sobic006G102900 Sobic006G116500 Sobic006G116500 Sobic010G274000--Sobic006G116500 Sobic004G077100 Sobic004G077100 Sobic003G041700--Sobic004G077100 Sobic003G387600 Sobic003G387600 Sobic003G041700--Sobic003G387600 Sobic003G041700--Sobic001G403200 Sobic006G214000 Sobic006G214000 Sobic003G041700--Sobic006G214000 Sobic001G075400 Sobic001G075400 Sobic003G041700--Sobic001G075400 Sobic003G041700--Sobic008G113800 Sobic003G041700--Sobic010G104400 Sobic003G273800 Sobic003G273800 Sobic003G041700--Sobic003G273800 Sobic001G131300 Sobic001G131300 Sobic003G041700--Sobic001G131300 Sobic003G118100 Sobic003G118100 Sobic002G191000--Sobic003G118100 Sobic006G035600 Sobic006G035600 Sobic002G191000--Sobic006G035600 Sobic010G051100 Sobic010G051100 Sobic002G191000--Sobic010G051100 Sobic002G191000--Sobic001G029800 Sobic010G008900 Sobic010G008900 Sobic002G191000--Sobic010G008900 Sobic002G191000--Sobic001G070300 Sobic002G191000--Sobic010G274000 Sobic002G191000--Sobic004G271500 Sobic002G191000--Sobic009G181500 Sobic001G103000--Sobic010G274000 Sobic004G355500 Sobic004G355500 Sobic001G103000--Sobic004G355500 Sobic001G103000--Sobic002G191000 Sobic007G139500 Sobic007G139500 Sobic001G103000--Sobic007G139500 Sobic003G135400 Sobic003G135400 Sobic001G103000--Sobic003G135400 Sobic003G410600 Sobic003G410600 Sobic001G103000--Sobic003G410600 Sobic001G103000--Sobic004G197400 Sobic001G103000--Sobic007G152900 Sobic001G103000--Sobic006G116500 Sobic009G088200--Sobic004G355500 Sobic002G280700 Sobic002G280700 Sobic009G088200--Sobic002G280700 Sobic009G088200--Sobic007G152900 Sobic003G396600 Sobic003G396600 Sobic009G088200--Sobic003G396600 Sobic007G079600 Sobic007G079600 Sobic009G088200--Sobic007G079600 Sobic009G088200--Sobic001G078600 Sobic009G088200--Sobic001G103000 Sobic010G032700 Sobic010G032700 Sobic009G088200--Sobic010G032700 Sobic005G047100 Sobic005G047100 Sobic009G088200--Sobic005G047100 Sobic007G152900--Sobic004G355500 Sobic010G103700 Sobic010G103700 Sobic007G152900--Sobic010G103700 Sobic007G152900--Sobic006G116500 Sobic007G152900--Sobic009G088200 Sobic007G152900--Sobic001G070300 Sobic007G152900--Sobic010G274000 Sobic006G140100 Sobic006G140100 Sobic007G152900--Sobic006G140100 Sobic007G152900--Sobic002G280700 Sobic007G152900--Sobic001G103000 Sobic003G247600 Sobic003G247600 Sobic003G420100--Sobic003G247600 Sobic004G233700 Sobic004G233700 Sobic003G420100--Sobic004G233700 Sobic009G242501 Sobic009G242501 Sobic003G420100--Sobic009G242501 Sobic007G208100 Sobic007G208100 Sobic003G420100--Sobic007G208100 Sobic004G286700 Sobic004G286700 Sobic003G420100--Sobic004G286700 Sobic003G420100--Sobic005G047100 Sobic008G141200 Sobic008G141200 Sobic003G420100--Sobic008G141200 Sobic004G066900 Sobic004G066900 Sobic003G420100--Sobic004G066900 Sobic003G420100--Sobic003G135400
Octagon: transcription factors


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