Gene annotation
Transcriptome id Sobic.001G379500.1
Synonym Sb01g036010
Functional annotation expressed protein
UniProt C5X0S0
Pfam PF05701
Panther DB PTHR32054 PTHR32054:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38370 : Plant protein of unknown function (DUF827)
RAP-DB (Rice) LOC_Os03g22040.1 : expressed protein
MaizeGDB (Corn) Zm00025a052417 , Zm00025a015434
Brachypodium KQK14649
Barley HORVU2Hr1G018380.8 , HORVU2Hr1G018380.9 , HORVU2Hr1G018380.2 , HORVU2Hr1G018380.3 , HORVU2Hr1G018380.1 , HORVU2Hr1G018380.6 , HORVU2Hr1G018380.7 , HORVU2Hr1G018380.4 , HORVU2Hr1G018380.5
Wheat TraesCS2D02G107200 , TraesCS2A02G106600 , TraesCS2B02G124200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G059900 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed -
2 Sobic.009G101100 patellin protein, putative, expressed -
3 Sobic.005G210600 expressed protein -
4 Sobic.009G127800 BZIP protein, putative, expressed -
5 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
6 Sobic.006G221300 expressed protein -
7 Sobic.001G304800 expressed protein -
8 Sobic.002G286700 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
9 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
10 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
11 Sobic.006G124400 ATP binding protein, putative, expressed -
12 Sobic.007G027900 chloroplast unusual positioning protein, putative, expressed -
13 Sobic.001G075400 expressed protein -
14 Sobic.004G052200 expressed protein -
15 Sobic.007G162400 ABC-2 type transporter domain containing protein, expressed -
16 Sobic.008G032800 heavy-metal-associated domain-containing protein, putative, expressed -
17 Sobic.005G188400 remorin C-terminal domain containing protein, putative, expressed -
18 Sobic.004G313900 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
19 Sobic.008G083500 expressed protein -
20 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase


Gene co-expression network
sample Sobic001G379500 Sobic001G379500 Sobic001G059900 Sobic001G059900 Sobic001G379500--Sobic001G059900 Sobic009G101100 Sobic009G101100 Sobic001G379500--Sobic009G101100 Sobic005G210600 Sobic005G210600 Sobic001G379500--Sobic005G210600 Sobic009G127800 Sobic009G127800 Sobic001G379500--Sobic009G127800 Sobic002G296000 Sobic002G296000 Sobic001G379500--Sobic002G296000 Sobic006G221300 Sobic006G221300 Sobic001G379500--Sobic006G221300 Sobic001G304800 Sobic001G304800 Sobic001G379500--Sobic001G304800 Sobic002G286700 Sobic002G286700 Sobic001G379500--Sobic002G286700 Sobic006G105600 Sobic006G105600 Sobic001G379500--Sobic006G105600 Sobic001G059900--Sobic001G379500 Sobic001G059900--Sobic009G101100 Sobic003G273800 Sobic003G273800 Sobic001G059900--Sobic003G273800 Sobic001G059900--Sobic009G127800 Sobic003G041700 Sobic003G041700 Sobic001G059900--Sobic003G041700 Sobic001G059900--Sobic005G210600 Sobic005G188400 Sobic005G188400 Sobic001G059900--Sobic005G188400 Sobic002G237700 Sobic002G237700 Sobic001G059900--Sobic002G237700 Sobic004G234500 Sobic004G234500 Sobic001G059900--Sobic004G234500 Sobic009G101100--Sobic002G296000 Sobic006G124400 Sobic006G124400 Sobic009G101100--Sobic006G124400 Sobic007G027900 Sobic007G027900 Sobic009G101100--Sobic007G027900 Sobic003G032200 Sobic003G032200 Sobic009G101100--Sobic003G032200 Sobic009G101100--Sobic006G221300 Sobic009G101100--Sobic001G304800 Sobic008G083500 Sobic008G083500 Sobic009G101100--Sobic008G083500 Sobic009G101100--Sobic006G105600 Sobic010G105400 Sobic010G105400 Sobic009G101100--Sobic010G105400 Sobic007G207700 Sobic007G207700 Sobic005G210600--Sobic007G207700 Sobic005G016300 Sobic005G016300 Sobic005G210600--Sobic005G016300 Sobic005G210600--Sobic001G379500 Sobic006G134200 Sobic006G134200 Sobic005G210600--Sobic006G134200 Sobic005G210600--Sobic009G101100 Sobic004G180400 Sobic004G180400 Sobic005G210600--Sobic004G180400 Sobic006G179200 Sobic006G179200 Sobic005G210600--Sobic006G179200 Sobic001G140600 Sobic001G140600 Sobic005G210600--Sobic001G140600 Sobic010G003300 Sobic010G003300 Sobic005G210600--Sobic010G003300 Sobic009G127800--Sobic006G221300 Sobic009G225500 Sobic009G225500 Sobic009G127800--Sobic009G225500 Sobic001G054700 Sobic001G054700 Sobic009G127800--Sobic001G054700 Sobic006G142500 Sobic006G142500 Sobic009G127800--Sobic006G142500 Sobic008G052300 Sobic008G052300 Sobic009G127800--Sobic008G052300 Sobic002G279400 Sobic002G279400 Sobic009G127800--Sobic002G279400 Sobic007G162400 Sobic007G162400 Sobic009G127800--Sobic007G162400 Sobic002G027600 Sobic002G027600 Sobic009G127800--Sobic002G027600 Sobic005G157300 Sobic005G157300 Sobic009G127800--Sobic005G157300 Sobic002G296000--Sobic007G027900 Sobic002G296000--Sobic006G124400 Sobic002G296000--Sobic009G101100 Sobic007G168900 Sobic007G168900 Sobic002G296000--Sobic007G168900 Sobic005G005700 Sobic005G005700 Sobic002G296000--Sobic005G005700 Sobic008G006800 Sobic008G006800 Sobic002G296000--Sobic008G006800 Sobic004G271300 Sobic004G271300 Sobic002G296000--Sobic004G271300 Sobic010G017400 Sobic010G017400 Sobic002G296000--Sobic010G017400 Sobic002G296000--Sobic008G083500 Sobic006G221300--Sobic009G127800 Sobic006G221300--Sobic001G054700 Sobic009G077300 Sobic009G077300 Sobic006G221300--Sobic009G077300 Sobic005G153000 Sobic005G153000 Sobic006G221300--Sobic005G153000 Sobic009G143200 Sobic009G143200 Sobic006G221300--Sobic009G143200 Sobic004G108400 Sobic004G108400 Sobic006G221300--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic006G221300--Sobic004G052200 Sobic006G221300--Sobic009G225500 Sobic006G221300--Sobic008G052300 Sobic001G304800--Sobic002G296000 Sobic001G304800--Sobic002G286700 Sobic001G304800--Sobic008G083500 Sobic001G304800--Sobic009G101100 Sobic001G304800--Sobic006G105600 Sobic007G218100 Sobic007G218100 Sobic001G304800--Sobic007G218100 Sobic003G246800 Sobic003G246800 Sobic001G304800--Sobic003G246800 Sobic009G146250 Sobic009G146250 Sobic001G304800--Sobic009G146250 Sobic001G304800--Sobic006G124400 Sobic008G190000 Sobic008G190000 Sobic002G286700--Sobic008G190000 Sobic002G286700--Sobic001G304800 Sobic002G286700--Sobic003G246800 Sobic002G286700--Sobic008G083500 Sobic002G286700--Sobic002G296000 Sobic002G286700--Sobic009G101100 Sobic001G461800 Sobic001G461800 Sobic002G286700--Sobic001G461800 Sobic002G286700--Sobic006G105600 Sobic002G286700--Sobic003G032200 Sobic005G091000 Sobic005G091000 Sobic006G105600--Sobic005G091000 Sobic001G267100 Sobic001G267100 Sobic006G105600--Sobic001G267100 Sobic006G105600--Sobic006G124400 Sobic006G105600--Sobic002G296000 Sobic009G137500 Sobic009G137500 Sobic006G105600--Sobic009G137500 Sobic002G394500 Sobic002G394500 Sobic006G105600--Sobic002G394500 Sobic004G233700 Sobic004G233700 Sobic006G105600--Sobic004G233700 Sobic006G105600--Sobic008G083500 Sobic006G105600--Sobic001G304800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.