Gene annotation
Transcriptome id Sobic.005G188400.1
Synonym Sb05g024580
Functional annotation remorin C-terminal domain containing protein, putative, expressed
UniProt C5Y6F6
Pfam PF03763
Panther DB PTHR31471 PTHR31471:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G53860 : Remorin family protein
RAP-DB (Rice) LOC_Os11g40210.1 : remorin C-terminal domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a029334
Brachypodium KQJ87828
Barley HORVU5Hr1G009780.7 , HORVU5Hr1G009780.6 , HORVU5Hr1G009780.5 , HORVU5Hr1G009780.4 , HORVU5Hr1G009780.2 , HORVU5Hr1G009780.1 , HORVU5Hr1G009780.9 , HORVU5Hr1G009780.10 , HORVU2Hr1G084090.3 , HORVU2Hr1G084090.2 , HORVU2Hr1G084090.1
Wheat TraesCS2D02G343900 , TraesCS5B02G041700 , TraesCS5B02G041700 , TraesCS2B02G363600 , TraesCS5B02G041700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G069500 glutaredoxin, putative, expressed -
2 Sobic.003G364700 expressed protein -
3 Sobic.003G273800 IQ calmodulin-binding motif domain containing protein, expressed -
4 Sobic.008G127200 expressed protein -
5 Sobic.009G233600 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
6 Sobic.001G511200 expressed protein -
7 Sobic.002G219500 ATPase, putative, expressed -
8 Sobic.004G180400 remorin family protein, putative, expressed -
9 Sobic.002G237700 expressed protein -
10 Sobic.001G399400 calmodulin binding protein, putative, expressed -
11 Sobic.009G229100 expressed protein -
12 Sobic.001G155600 expansin precursor, putative, expressed -
13 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
14 Sobic.001G059900 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed -
15 Sobic.002G022600 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
16 Sobic.006G271100 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
17 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
18 Sobic.001G379500 expressed protein -
19 Sobic.010G145200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CPuORF31 - conserved peptide uORF-containing transcript, expressed -
20 Sobic.001G079600 HLS, putative, expressed -


Gene co-expression network
sample Sobic005G188400 Sobic005G188400 Sobic006G069500 Sobic006G069500 Sobic005G188400--Sobic006G069500 Sobic003G364700 Sobic003G364700 Sobic005G188400--Sobic003G364700 Sobic003G273800 Sobic003G273800 Sobic005G188400--Sobic003G273800 Sobic008G127200 Sobic008G127200 Sobic005G188400--Sobic008G127200 Sobic009G233600 Sobic009G233600 Sobic005G188400--Sobic009G233600 Sobic001G511200 Sobic001G511200 Sobic005G188400--Sobic001G511200 Sobic002G219500 Sobic002G219500 Sobic005G188400--Sobic002G219500 Sobic004G180400 Sobic004G180400 Sobic005G188400--Sobic004G180400 Sobic002G237700 Sobic002G237700 Sobic005G188400--Sobic002G237700 Sobic006G069500--Sobic001G511200 Sobic006G069500--Sobic003G273800 Sobic006G069500--Sobic004G180400 Sobic004G077100 Sobic004G077100 Sobic006G069500--Sobic004G077100 Sobic009G178900 Sobic009G178900 Sobic006G069500--Sobic009G178900 Sobic006G069500--Sobic005G188400 Sobic006G069500--Sobic002G237700 Sobic006G069500--Sobic003G364700 Sobic009G233500 Sobic009G233500 Sobic006G069500--Sobic009G233500 Sobic009G229100 Sobic009G229100 Sobic003G364700--Sobic009G229100 Sobic003G364700--Sobic001G511200 Sobic002G356700 Sobic002G356700 Sobic003G364700--Sobic002G356700 Sobic007G051501 Sobic007G051501 Sobic003G364700--Sobic007G051501 Sobic003G364700--Sobic009G233600 Sobic005G022400 Sobic005G022400 Sobic003G364700--Sobic005G022400 Sobic003G423100 Sobic003G423100 Sobic003G364700--Sobic003G423100 Sobic003G178200 Sobic003G178200 Sobic003G364700--Sobic003G178200 Sobic009G070000 Sobic009G070000 Sobic003G364700--Sobic009G070000 Sobic003G273800--Sobic006G069500 Sobic003G273800--Sobic002G237700 Sobic003G273800--Sobic001G511200 Sobic003G273800--Sobic009G178900 Sobic003G273800--Sobic009G233600 Sobic003G273800--Sobic004G077100 Sobic003G273800--Sobic004G180400 Sobic003G273800--Sobic005G188400 Sobic001G059900 Sobic001G059900 Sobic003G273800--Sobic001G059900 Sobic008G127200--Sobic002G356700 Sobic010G145200 Sobic010G145200 Sobic008G127200--Sobic010G145200 Sobic003G201300 Sobic003G201300 Sobic008G127200--Sobic003G201300 Sobic008G127200--Sobic001G511200 Sobic007G224800 Sobic007G224800 Sobic008G127200--Sobic007G224800 Sobic008G127200--Sobic003G178200 Sobic008G078600 Sobic008G078600 Sobic008G127200--Sobic008G078600 Sobic009G116766 Sobic009G116766 Sobic008G127200--Sobic009G116766 Sobic008G127200--Sobic003G364700 Sobic009G233600--Sobic002G356700 Sobic009G233600--Sobic009G229100 Sobic009G233600--Sobic003G364700 Sobic009G233600--Sobic001G511200 Sobic004G356600 Sobic004G356600 Sobic009G233600--Sobic004G356600 Sobic009G233600--Sobic005G022400 Sobic009G233600--Sobic010G145200 Sobic009G233600--Sobic003G178200 Sobic009G233600--Sobic002G237700 Sobic001G511200--Sobic006G069500 Sobic001G511200--Sobic003G364700 Sobic001G511200--Sobic009G229100 Sobic001G511200--Sobic003G273800 Sobic001G511200--Sobic009G178900 Sobic001G511200--Sobic002G356700 Sobic001G511200--Sobic009G233600 Sobic001G511200--Sobic008G127200 Sobic001G511200--Sobic003G201300 Sobic001G399400 Sobic001G399400 Sobic002G219500--Sobic001G399400 Sobic003G399400 Sobic003G399400 Sobic002G219500--Sobic003G399400 Sobic006G271100 Sobic006G271100 Sobic002G219500--Sobic006G271100 Sobic004G225400 Sobic004G225400 Sobic002G219500--Sobic004G225400 Sobic002G219500--Sobic005G188400 Sobic003G184500 Sobic003G184500 Sobic002G219500--Sobic003G184500 Sobic006G228100 Sobic006G228100 Sobic002G219500--Sobic006G228100 Sobic002G004500 Sobic002G004500 Sobic002G219500--Sobic002G004500 Sobic009G159600 Sobic009G159600 Sobic002G219500--Sobic009G159600 Sobic004G180400--Sobic006G069500 Sobic004G180400--Sobic009G233500 Sobic004G180400--Sobic004G077100 Sobic004G180400--Sobic001G511200 Sobic004G180400--Sobic003G273800 Sobic004G180400--Sobic009G178900 Sobic001G533200 Sobic001G533200 Sobic004G180400--Sobic001G533200 Sobic001G075400 Sobic001G075400 Sobic004G180400--Sobic001G075400 Sobic005G210600 Sobic005G210600 Sobic004G180400--Sobic005G210600 Sobic002G237700--Sobic003G273800 Sobic002G237700--Sobic009G233600 Sobic002G237700--Sobic006G069500 Sobic002G237700--Sobic001G511200 Sobic006G240300 Sobic006G240300 Sobic002G237700--Sobic006G240300 Sobic002G237700--Sobic005G188400 Sobic002G237700--Sobic002G356700 Sobic002G237700--Sobic004G180400 Sobic002G237700--Sobic009G229100
Octagon: transcription factors


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