Gene annotation
Transcriptome id Sobic.001G155600.4,Sobic.001G155600.2,Sobic.001G155600.3
Synonym ATHEXPBETA1.1, EXPB4, ATEXPB4, Sb01g013550
Functional annotation expansin precursor, putative, expressed
UniProt A0A1B6QJ49
Pfam PF03330 PF01357
Panther DB PTHR31692 PTHR31692:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45110 : expansin B4
RAP-DB (Rice) LOC_Os03g44290.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a007281
Brachypodium KQK13988 , KQK13986 , KQK13987
Barley HORVU2Hr1G013380.1
Wheat TraesCS2B02G607400 , TraesCS2D02G592900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G188400 remorin C-terminal domain containing protein, putative, expressed -
2 Sobic.009G229100 expressed protein -
3 Sobic.003G364700 expressed protein -
4 Sobic.003G047300 phototropic-responsive NPH3 family protein, putative, expressed -
5 Sobic.006G069500 glutaredoxin, putative, expressed -
6 Sobic.008G137500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
8 Sobic.009G233600 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
9 Sobic.001G511200 expressed protein -
10 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
11 Sobic.006G271100 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
12 Sobic.003G273800 IQ calmodulin-binding motif domain containing protein, expressed -
13 Sobic.005G111600 CRP7 - Cysteine-rich family protein precursor, expressed -
14 Sobic.002G022600 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
15 Sobic.002G219500 ATPase, putative, expressed -
16 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
17 Sobic.010G271000 expansin precursor, putative, expressed -
18 Sobic.002G237700 expressed protein -
19 Sobic.001G404000 glucan endo-1,3-beta-glucosidase 9 precursor, putative, expressed -
20 Sobic.010G145200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CPuORF31 - conserved peptide uORF-containing transcript, expressed -


Gene co-expression network
sample Sobic001G155600 Sobic001G155600 Sobic005G188400 Sobic005G188400 Sobic001G155600--Sobic005G188400 Sobic009G229100 Sobic009G229100 Sobic001G155600--Sobic009G229100 Sobic003G364700 Sobic003G364700 Sobic001G155600--Sobic003G364700 Sobic003G047300 Sobic003G047300 Sobic001G155600--Sobic003G047300 Sobic006G069500 Sobic006G069500 Sobic001G155600--Sobic006G069500 Sobic008G137500 Sobic008G137500 Sobic001G155600--Sobic008G137500 Sobic009G178900 Sobic009G178900 Sobic001G155600--Sobic009G178900 Sobic009G233600 Sobic009G233600 Sobic001G155600--Sobic009G233600 Sobic001G511200 Sobic001G511200 Sobic001G155600--Sobic001G511200 Sobic005G188400--Sobic006G069500 Sobic005G188400--Sobic003G364700 Sobic003G273800 Sobic003G273800 Sobic005G188400--Sobic003G273800 Sobic008G127200 Sobic008G127200 Sobic005G188400--Sobic008G127200 Sobic005G188400--Sobic009G233600 Sobic005G188400--Sobic001G511200 Sobic002G219500 Sobic002G219500 Sobic005G188400--Sobic002G219500 Sobic004G180400 Sobic004G180400 Sobic005G188400--Sobic004G180400 Sobic002G237700 Sobic002G237700 Sobic005G188400--Sobic002G237700 Sobic009G229100--Sobic003G364700 Sobic009G229100--Sobic009G233600 Sobic002G356700 Sobic002G356700 Sobic009G229100--Sobic002G356700 Sobic001G527500 Sobic001G527500 Sobic009G229100--Sobic001G527500 Sobic003G178200 Sobic003G178200 Sobic009G229100--Sobic003G178200 Sobic007G017900 Sobic007G017900 Sobic009G229100--Sobic007G017900 Sobic003G245700 Sobic003G245700 Sobic009G229100--Sobic003G245700 Sobic009G229100--Sobic001G511200 Sobic003G423100 Sobic003G423100 Sobic009G229100--Sobic003G423100 Sobic003G364700--Sobic009G229100 Sobic003G364700--Sobic001G511200 Sobic003G364700--Sobic002G356700 Sobic007G051501 Sobic007G051501 Sobic003G364700--Sobic007G051501 Sobic003G364700--Sobic009G233600 Sobic005G022400 Sobic005G022400 Sobic003G364700--Sobic005G022400 Sobic003G364700--Sobic003G423100 Sobic003G364700--Sobic003G178200 Sobic009G070000 Sobic009G070000 Sobic003G364700--Sobic009G070000 Sobic003G047300--Sobic009G070000 Sobic006G271100 Sobic006G271100 Sobic003G047300--Sobic006G271100 Sobic001G049000 Sobic001G049000 Sobic003G047300--Sobic001G049000 Sobic004G296100 Sobic004G296100 Sobic003G047300--Sobic004G296100 Sobic005G111600 Sobic005G111600 Sobic003G047300--Sobic005G111600 Sobic003G047300--Sobic003G364700 Sobic010G145200 Sobic010G145200 Sobic003G047300--Sobic010G145200 Sobic003G047300--Sobic009G229100 Sobic004G049800 Sobic004G049800 Sobic003G047300--Sobic004G049800 Sobic006G069500--Sobic001G511200 Sobic006G069500--Sobic003G273800 Sobic006G069500--Sobic004G180400 Sobic004G077100 Sobic004G077100 Sobic006G069500--Sobic004G077100 Sobic006G069500--Sobic009G178900 Sobic006G069500--Sobic005G188400 Sobic006G069500--Sobic002G237700 Sobic006G069500--Sobic003G364700 Sobic009G233500 Sobic009G233500 Sobic006G069500--Sobic009G233500 Sobic010G191100 Sobic010G191100 Sobic008G137500--Sobic010G191100 Sobic008G137500--Sobic005G111600 Sobic002G408500 Sobic002G408500 Sobic008G137500--Sobic002G408500 Sobic008G137500--Sobic009G229100 Sobic006G228100 Sobic006G228100 Sobic008G137500--Sobic006G228100 Sobic008G137500--Sobic009G070000 Sobic004G155900 Sobic004G155900 Sobic008G137500--Sobic004G155900 Sobic010G246500 Sobic010G246500 Sobic008G137500--Sobic010G246500 Sobic002G154300 Sobic002G154300 Sobic008G137500--Sobic002G154300 Sobic009G178900--Sobic001G511200 Sobic009G178900--Sobic006G069500 Sobic009G178900--Sobic003G273800 Sobic009G178900--Sobic004G180400 Sobic009G178900--Sobic003G364700 Sobic009G178900--Sobic009G233600 Sobic009G178900--Sobic004G077100 Sobic005G016300 Sobic005G016300 Sobic009G178900--Sobic005G016300 Sobic009G178900--Sobic006G271100 Sobic009G233600--Sobic002G356700 Sobic009G233600--Sobic009G229100 Sobic009G233600--Sobic003G364700 Sobic009G233600--Sobic001G511200 Sobic004G356600 Sobic004G356600 Sobic009G233600--Sobic004G356600 Sobic009G233600--Sobic005G022400 Sobic009G233600--Sobic010G145200 Sobic009G233600--Sobic003G178200 Sobic009G233600--Sobic002G237700 Sobic001G511200--Sobic006G069500 Sobic001G511200--Sobic003G364700 Sobic001G511200--Sobic009G229100 Sobic001G511200--Sobic003G273800 Sobic001G511200--Sobic009G178900 Sobic001G511200--Sobic002G356700 Sobic001G511200--Sobic009G233600 Sobic001G511200--Sobic008G127200 Sobic003G201300 Sobic003G201300 Sobic001G511200--Sobic003G201300
Octagon: transcription factors


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