Gene annotation
Transcriptome id Sobic.010G271000.1
Synonym EXLA1, ATEXPL1, ATHEXPBETA2.1, Sb10g030575, EXPL1, ATEXLA1
Functional annotation expansin precursor, putative, expressed
UniProt A0A194YLQ5 , A0A120GUW3
Pfam PF01357
Panther DB PTHR31692 PTHR31692:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G45970 : expansin-like A1
RAP-DB (Rice) LOC_Os06g50960.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018528
Brachypodium PNT67810
Barley -
Wheat TraesCS1A02G203200 , TraesCS1D02G206700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G233600 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
2 Sobic.002G154300 serine/threonine-protein kinase receptor precursor, putative, expressed -
3 Sobic.003G273800 IQ calmodulin-binding motif domain containing protein, expressed -
4 Sobic.001G511200 expressed protein -
5 Sobic.009G229100 expressed protein -
6 Sobic.006G069500 glutaredoxin, putative, expressed -
7 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
8 Sobic.003G364700 expressed protein -
9 Sobic.002G237700 expressed protein -
10 Sobic.005G188400 remorin C-terminal domain containing protein, putative, expressed -
11 Sobic.008G137500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.001G527500 helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
14 Sobic.008G042100 -(PubMedID : 29751546)@DUF623 domain containing protein, expressed -
15 Sobic.005G022400 GATA zinc finger domain containing protein, expressed -
16 Sobic.007G017900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
17 Sobic.006G260600 OTU-like cysteine protease family protein, putative, expressed K13717: OTU domain-containing protein 3
18 Sobic.004G263300 PPR repeat domain containing protein, putative, expressed -
19 Sobic.010G191100 helix-loop-helix DNA-binding, putative, expressed -
20 Sobic.003G178200 tetratricopeptide repeat containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G271000 Sobic010G271000 Sobic009G233600 Sobic009G233600 Sobic010G271000--Sobic009G233600 Sobic002G154300 Sobic002G154300 Sobic010G271000--Sobic002G154300 Sobic003G273800 Sobic003G273800 Sobic010G271000--Sobic003G273800 Sobic001G511200 Sobic001G511200 Sobic010G271000--Sobic001G511200 Sobic009G229100 Sobic009G229100 Sobic010G271000--Sobic009G229100 Sobic006G069500 Sobic006G069500 Sobic010G271000--Sobic006G069500 Sobic002G356700 Sobic002G356700 Sobic010G271000--Sobic002G356700 Sobic003G364700 Sobic003G364700 Sobic010G271000--Sobic003G364700 Sobic002G237700 Sobic002G237700 Sobic010G271000--Sobic002G237700 Sobic009G233600--Sobic002G356700 Sobic009G233600--Sobic009G229100 Sobic009G233600--Sobic003G364700 Sobic009G233600--Sobic001G511200 Sobic004G356600 Sobic004G356600 Sobic009G233600--Sobic004G356600 Sobic005G022400 Sobic005G022400 Sobic009G233600--Sobic005G022400 Sobic010G145200 Sobic010G145200 Sobic009G233600--Sobic010G145200 Sobic003G178200 Sobic003G178200 Sobic009G233600--Sobic003G178200 Sobic009G233600--Sobic002G237700 Sobic010G191100 Sobic010G191100 Sobic002G154300--Sobic010G191100 Sobic002G154300--Sobic010G271000 Sobic008G137500 Sobic008G137500 Sobic002G154300--Sobic008G137500 Sobic004G343700 Sobic004G343700 Sobic002G154300--Sobic004G343700 Sobic002G154300--Sobic006G069500 Sobic009G233500 Sobic009G233500 Sobic002G154300--Sobic009G233500 Sobic002G154300--Sobic003G273800 Sobic002G154300--Sobic001G511200 Sobic002G408500 Sobic002G408500 Sobic002G154300--Sobic002G408500 Sobic003G273800--Sobic006G069500 Sobic003G273800--Sobic002G237700 Sobic003G273800--Sobic001G511200 Sobic009G178900 Sobic009G178900 Sobic003G273800--Sobic009G178900 Sobic003G273800--Sobic009G233600 Sobic004G077100 Sobic004G077100 Sobic003G273800--Sobic004G077100 Sobic004G180400 Sobic004G180400 Sobic003G273800--Sobic004G180400 Sobic005G188400 Sobic005G188400 Sobic003G273800--Sobic005G188400 Sobic001G059900 Sobic001G059900 Sobic003G273800--Sobic001G059900 Sobic001G511200--Sobic006G069500 Sobic001G511200--Sobic003G364700 Sobic001G511200--Sobic009G229100 Sobic001G511200--Sobic003G273800 Sobic001G511200--Sobic009G178900 Sobic001G511200--Sobic002G356700 Sobic001G511200--Sobic009G233600 Sobic008G127200 Sobic008G127200 Sobic001G511200--Sobic008G127200 Sobic003G201300 Sobic003G201300 Sobic001G511200--Sobic003G201300 Sobic009G229100--Sobic003G364700 Sobic009G229100--Sobic009G233600 Sobic009G229100--Sobic002G356700 Sobic001G527500 Sobic001G527500 Sobic009G229100--Sobic001G527500 Sobic009G229100--Sobic003G178200 Sobic007G017900 Sobic007G017900 Sobic009G229100--Sobic007G017900 Sobic003G245700 Sobic003G245700 Sobic009G229100--Sobic003G245700 Sobic009G229100--Sobic001G511200 Sobic003G423100 Sobic003G423100 Sobic009G229100--Sobic003G423100 Sobic006G069500--Sobic001G511200 Sobic006G069500--Sobic003G273800 Sobic006G069500--Sobic004G180400 Sobic006G069500--Sobic004G077100 Sobic006G069500--Sobic009G178900 Sobic006G069500--Sobic005G188400 Sobic006G069500--Sobic002G237700 Sobic006G069500--Sobic003G364700 Sobic006G069500--Sobic009G233500 Sobic002G356700--Sobic009G233600 Sobic002G356700--Sobic003G178200 Sobic002G356700--Sobic003G245700 Sobic006G090201 Sobic006G090201 Sobic002G356700--Sobic006G090201 Sobic002G356700--Sobic005G022400 Sobic001G361500 Sobic001G361500 Sobic002G356700--Sobic001G361500 Sobic008G023500 Sobic008G023500 Sobic002G356700--Sobic008G023500 Sobic009G164200 Sobic009G164200 Sobic002G356700--Sobic009G164200 Sobic007G072901 Sobic007G072901 Sobic002G356700--Sobic007G072901 Sobic003G364700--Sobic009G229100 Sobic003G364700--Sobic001G511200 Sobic003G364700--Sobic002G356700 Sobic007G051501 Sobic007G051501 Sobic003G364700--Sobic007G051501 Sobic003G364700--Sobic009G233600 Sobic003G364700--Sobic005G022400 Sobic003G364700--Sobic003G423100 Sobic003G364700--Sobic003G178200 Sobic009G070000 Sobic009G070000 Sobic003G364700--Sobic009G070000 Sobic002G237700--Sobic003G273800 Sobic002G237700--Sobic009G233600 Sobic002G237700--Sobic006G069500 Sobic002G237700--Sobic001G511200 Sobic006G240300 Sobic006G240300 Sobic002G237700--Sobic006G240300 Sobic002G237700--Sobic005G188400 Sobic002G237700--Sobic002G356700 Sobic002G237700--Sobic004G180400 Sobic002G237700--Sobic009G229100
Octagon: transcription factors


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