Gene annotation
Transcriptome id Sobic.003G273800.1
Synonym IQD6, Sb03g032580
Functional annotation IQ calmodulin-binding motif domain containing protein, expressed
UniProt C5XHP0
Pfam PF13178 PF00612
Panther DB PTHR32295 PTHR32295:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G26180 : IQ-domain 6
RAP-DB (Rice) LOC_Os01g51230.1 : IQ calmodulin-binding motif domain containing protein, expressed
MaizeGDB (Corn) Zm00025a027832
Brachypodium KQK05132
Barley HORVU1Hr1G079590.14 , HORVU1Hr1G079590.11 , HORVU1Hr1G079590.12 , HORVU3Hr1G066840.4 , HORVU3Hr1G066840.1 , HORVU3Hr1G066840.3 , HORVU3Hr1G066840.2 , HORVU1Hr1G079590.8
Wheat TraesCS3A02G251400 , TraesCS3B02G280900 , TraesCS1D02G367300 , TraesCS1D02G367300 , TraesCS3D02G251800 , TraesCS3D02G251800 , TraesCS1B02G379600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G069500 glutaredoxin, putative, expressed -
2 Sobic.002G237700 expressed protein -
3 Sobic.001G511200 expressed protein -
4 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
5 Sobic.009G233600 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
6 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
7 Sobic.004G180400 remorin family protein, putative, expressed -
8 Sobic.005G188400 remorin C-terminal domain containing protein, putative, expressed -
9 Sobic.001G059900 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed -
10 Sobic.008G127200 expressed protein -
11 Sobic.003G041700 DNA mismatch repair protein MSH6-2, putative, expressed K08737: DNA mismatch repair protein MSH6
12 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
13 Sobic.010G271000 expansin precursor, putative, expressed -
14 Sobic.002G362600 expressed protein -
15 Sobic.009G233500 expressed protein -
16 Sobic.003G364700 expressed protein -
17 Sobic.005G016300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G075400 expressed protein -
19 Sobic.001G533200 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.006G240300 expressed protein K10882: EME1, crossover junction endonuclease EME1


Gene co-expression network
sample Sobic003G273800 Sobic003G273800 Sobic006G069500 Sobic006G069500 Sobic003G273800--Sobic006G069500 Sobic002G237700 Sobic002G237700 Sobic003G273800--Sobic002G237700 Sobic001G511200 Sobic001G511200 Sobic003G273800--Sobic001G511200 Sobic009G178900 Sobic009G178900 Sobic003G273800--Sobic009G178900 Sobic009G233600 Sobic009G233600 Sobic003G273800--Sobic009G233600 Sobic004G077100 Sobic004G077100 Sobic003G273800--Sobic004G077100 Sobic004G180400 Sobic004G180400 Sobic003G273800--Sobic004G180400 Sobic005G188400 Sobic005G188400 Sobic003G273800--Sobic005G188400 Sobic001G059900 Sobic001G059900 Sobic003G273800--Sobic001G059900 Sobic006G069500--Sobic001G511200 Sobic006G069500--Sobic003G273800 Sobic006G069500--Sobic004G180400 Sobic006G069500--Sobic004G077100 Sobic006G069500--Sobic009G178900 Sobic006G069500--Sobic005G188400 Sobic006G069500--Sobic002G237700 Sobic003G364700 Sobic003G364700 Sobic006G069500--Sobic003G364700 Sobic009G233500 Sobic009G233500 Sobic006G069500--Sobic009G233500 Sobic002G237700--Sobic003G273800 Sobic002G237700--Sobic009G233600 Sobic002G237700--Sobic006G069500 Sobic002G237700--Sobic001G511200 Sobic006G240300 Sobic006G240300 Sobic002G237700--Sobic006G240300 Sobic002G237700--Sobic005G188400 Sobic002G356700 Sobic002G356700 Sobic002G237700--Sobic002G356700 Sobic002G237700--Sobic004G180400 Sobic009G229100 Sobic009G229100 Sobic002G237700--Sobic009G229100 Sobic001G511200--Sobic006G069500 Sobic001G511200--Sobic003G364700 Sobic001G511200--Sobic009G229100 Sobic001G511200--Sobic003G273800 Sobic001G511200--Sobic009G178900 Sobic001G511200--Sobic002G356700 Sobic001G511200--Sobic009G233600 Sobic008G127200 Sobic008G127200 Sobic001G511200--Sobic008G127200 Sobic003G201300 Sobic003G201300 Sobic001G511200--Sobic003G201300 Sobic009G178900--Sobic001G511200 Sobic009G178900--Sobic006G069500 Sobic009G178900--Sobic003G273800 Sobic009G178900--Sobic004G180400 Sobic009G178900--Sobic003G364700 Sobic009G178900--Sobic009G233600 Sobic009G178900--Sobic004G077100 Sobic005G016300 Sobic005G016300 Sobic009G178900--Sobic005G016300 Sobic006G271100 Sobic006G271100 Sobic009G178900--Sobic006G271100 Sobic009G233600--Sobic002G356700 Sobic009G233600--Sobic009G229100 Sobic009G233600--Sobic003G364700 Sobic009G233600--Sobic001G511200 Sobic004G356600 Sobic004G356600 Sobic009G233600--Sobic004G356600 Sobic005G022400 Sobic005G022400 Sobic009G233600--Sobic005G022400 Sobic010G145200 Sobic010G145200 Sobic009G233600--Sobic010G145200 Sobic003G178200 Sobic003G178200 Sobic009G233600--Sobic003G178200 Sobic009G233600--Sobic002G237700 Sobic001G075400 Sobic001G075400 Sobic004G077100--Sobic001G075400 Sobic004G077100--Sobic009G233500 Sobic004G077100--Sobic006G069500 Sobic004G077100--Sobic004G180400 Sobic003G041700 Sobic003G041700 Sobic004G077100--Sobic003G041700 Sobic004G077100--Sobic005G016300 Sobic004G077100--Sobic003G273800 Sobic010G104400 Sobic010G104400 Sobic004G077100--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic004G077100--Sobic006G214000 Sobic004G180400--Sobic006G069500 Sobic004G180400--Sobic009G233500 Sobic004G180400--Sobic004G077100 Sobic004G180400--Sobic001G511200 Sobic004G180400--Sobic003G273800 Sobic004G180400--Sobic009G178900 Sobic001G533200 Sobic001G533200 Sobic004G180400--Sobic001G533200 Sobic004G180400--Sobic001G075400 Sobic005G210600 Sobic005G210600 Sobic004G180400--Sobic005G210600 Sobic005G188400--Sobic006G069500 Sobic005G188400--Sobic003G364700 Sobic005G188400--Sobic003G273800 Sobic005G188400--Sobic008G127200 Sobic005G188400--Sobic009G233600 Sobic005G188400--Sobic001G511200 Sobic002G219500 Sobic002G219500 Sobic005G188400--Sobic002G219500 Sobic005G188400--Sobic004G180400 Sobic005G188400--Sobic002G237700 Sobic001G379500 Sobic001G379500 Sobic001G059900--Sobic001G379500 Sobic009G101100 Sobic009G101100 Sobic001G059900--Sobic009G101100 Sobic001G059900--Sobic003G273800 Sobic009G127800 Sobic009G127800 Sobic001G059900--Sobic009G127800 Sobic001G059900--Sobic003G041700 Sobic001G059900--Sobic005G210600 Sobic001G059900--Sobic005G188400 Sobic001G059900--Sobic002G237700 Sobic004G234500 Sobic004G234500 Sobic001G059900--Sobic004G234500
Octagon: transcription factors


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