Gene annotation
Transcriptome id Sobic.004G180400.1
Synonym Sb04g022970
Functional annotation remorin family protein, putative, expressed
UniProt A0A1Z5RN18
Pfam PF03763
Panther DB PTHR31471 PTHR31471:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67590 : Remorin family protein
RAP-DB (Rice) LOC_Os03g02840.1 : remorin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a031627
Brachypodium KQJ88593 , KQJ88594 , KQJ88595
Barley -
Wheat TraesCS4B02G076500 , TraesCS4D02G075000 , TraesCS4A02G238400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G069500 glutaredoxin, putative, expressed -
2 Sobic.009G233500 expressed protein -
3 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
4 Sobic.001G511200 expressed protein -
5 Sobic.003G273800 IQ calmodulin-binding motif domain containing protein, expressed -
6 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
7 Sobic.001G533200 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.001G075400 expressed protein -
9 Sobic.005G210600 expressed protein -
10 Sobic.005G188400 remorin C-terminal domain containing protein, putative, expressed -
11 Sobic.007G207700 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
12 Sobic.002G237700 expressed protein -
13 Sobic.005G016300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G379500 expressed protein -
15 Sobic.001G205000 ATEB1A-like microtubule associated protein, putative, expressed K10436: microtubule-associated protein, RP/EB family
16 Sobic.002G219500 ATPase, putative, expressed -
17 Sobic.001G030100 GIL1, putative, expressed -
18 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
19 Sobic.001G399400 calmodulin binding protein, putative, expressed -
20 Sobic.001G059900 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed -


Gene co-expression network
sample Sobic004G180400 Sobic004G180400 Sobic006G069500 Sobic006G069500 Sobic004G180400--Sobic006G069500 Sobic009G233500 Sobic009G233500 Sobic004G180400--Sobic009G233500 Sobic004G077100 Sobic004G077100 Sobic004G180400--Sobic004G077100 Sobic001G511200 Sobic001G511200 Sobic004G180400--Sobic001G511200 Sobic003G273800 Sobic003G273800 Sobic004G180400--Sobic003G273800 Sobic009G178900 Sobic009G178900 Sobic004G180400--Sobic009G178900 Sobic001G533200 Sobic001G533200 Sobic004G180400--Sobic001G533200 Sobic001G075400 Sobic001G075400 Sobic004G180400--Sobic001G075400 Sobic005G210600 Sobic005G210600 Sobic004G180400--Sobic005G210600 Sobic006G069500--Sobic001G511200 Sobic006G069500--Sobic003G273800 Sobic006G069500--Sobic004G180400 Sobic006G069500--Sobic004G077100 Sobic006G069500--Sobic009G178900 Sobic005G188400 Sobic005G188400 Sobic006G069500--Sobic005G188400 Sobic002G237700 Sobic002G237700 Sobic006G069500--Sobic002G237700 Sobic003G364700 Sobic003G364700 Sobic006G069500--Sobic003G364700 Sobic006G069500--Sobic009G233500 Sobic009G233500--Sobic004G077100 Sobic009G233500--Sobic004G180400 Sobic009G233500--Sobic001G075400 Sobic007G207700 Sobic007G207700 Sobic009G233500--Sobic007G207700 Sobic009G233500--Sobic006G069500 Sobic005G016300 Sobic005G016300 Sobic009G233500--Sobic005G016300 Sobic003G328500 Sobic003G328500 Sobic009G233500--Sobic003G328500 Sobic007G197700 Sobic007G197700 Sobic009G233500--Sobic007G197700 Sobic009G233500--Sobic001G533200 Sobic004G077100--Sobic001G075400 Sobic004G077100--Sobic009G233500 Sobic004G077100--Sobic006G069500 Sobic004G077100--Sobic004G180400 Sobic003G041700 Sobic003G041700 Sobic004G077100--Sobic003G041700 Sobic004G077100--Sobic005G016300 Sobic004G077100--Sobic003G273800 Sobic010G104400 Sobic010G104400 Sobic004G077100--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic004G077100--Sobic006G214000 Sobic001G511200--Sobic006G069500 Sobic001G511200--Sobic003G364700 Sobic009G229100 Sobic009G229100 Sobic001G511200--Sobic009G229100 Sobic001G511200--Sobic003G273800 Sobic001G511200--Sobic009G178900 Sobic002G356700 Sobic002G356700 Sobic001G511200--Sobic002G356700 Sobic009G233600 Sobic009G233600 Sobic001G511200--Sobic009G233600 Sobic008G127200 Sobic008G127200 Sobic001G511200--Sobic008G127200 Sobic003G201300 Sobic003G201300 Sobic001G511200--Sobic003G201300 Sobic003G273800--Sobic006G069500 Sobic003G273800--Sobic002G237700 Sobic003G273800--Sobic001G511200 Sobic003G273800--Sobic009G178900 Sobic003G273800--Sobic009G233600 Sobic003G273800--Sobic004G077100 Sobic003G273800--Sobic004G180400 Sobic003G273800--Sobic005G188400 Sobic001G059900 Sobic001G059900 Sobic003G273800--Sobic001G059900 Sobic009G178900--Sobic001G511200 Sobic009G178900--Sobic006G069500 Sobic009G178900--Sobic003G273800 Sobic009G178900--Sobic004G180400 Sobic009G178900--Sobic003G364700 Sobic009G178900--Sobic009G233600 Sobic009G178900--Sobic004G077100 Sobic009G178900--Sobic005G016300 Sobic006G271100 Sobic006G271100 Sobic009G178900--Sobic006G271100 Sobic001G533200--Sobic004G180400 Sobic001G533200--Sobic004G077100 Sobic001G533200--Sobic009G233500 Sobic001G533200--Sobic006G069500 Sobic001G533200--Sobic003G273800 Sobic001G533200--Sobic003G041700 Sobic001G533200--Sobic009G178900 Sobic004G117300 Sobic004G117300 Sobic001G533200--Sobic004G117300 Sobic008G113800 Sobic008G113800 Sobic001G533200--Sobic008G113800 Sobic001G075400--Sobic003G328500 Sobic001G075400--Sobic004G077100 Sobic001G177900 Sobic001G177900 Sobic001G075400--Sobic001G177900 Sobic006G134200 Sobic006G134200 Sobic001G075400--Sobic006G134200 Sobic001G075400--Sobic009G233500 Sobic001G075400--Sobic007G207700 Sobic002G313000 Sobic002G313000 Sobic001G075400--Sobic002G313000 Sobic001G075400--Sobic005G016300 Sobic001G131300 Sobic001G131300 Sobic001G075400--Sobic001G131300 Sobic005G210600--Sobic007G207700 Sobic005G210600--Sobic005G016300 Sobic001G379500 Sobic001G379500 Sobic005G210600--Sobic001G379500 Sobic005G210600--Sobic006G134200 Sobic009G101100 Sobic009G101100 Sobic005G210600--Sobic009G101100 Sobic005G210600--Sobic004G180400 Sobic006G179200 Sobic006G179200 Sobic005G210600--Sobic006G179200 Sobic001G140600 Sobic001G140600 Sobic005G210600--Sobic001G140600 Sobic010G003300 Sobic010G003300 Sobic005G210600--Sobic010G003300
Octagon: transcription factors


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