Gene annotation
Transcriptome id Sobic.009G233500.1
Synonym Sb09g028600
Functional annotation expressed protein
UniProt C5YVL2
Pfam PF03188
Panther DB PTHR23130 PTHR23130:SF104
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G30890 : Cytochrome b561/ferric reductase transmembrane protein family
RAP-DB (Rice) LOC_Os05g49040.1 : expressed protein
MaizeGDB (Corn) Zm00025a044582
Brachypodium -
Barley HORVU3Hr1G006680.1 , HORVU1Hr1G088010.1 , HORVU1Hr1G088010.2 , HORVU1Hr1G088010.3 , HORVU1Hr1G001200.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
2 Sobic.004G180400 remorin family protein, putative, expressed -
3 Sobic.001G075400 expressed protein -
4 Sobic.007G207700 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
5 Sobic.006G069500 glutaredoxin, putative, expressed -
6 Sobic.005G016300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
8 Sobic.007G197700 BHLH transcription factor, putative, expressed -
9 Sobic.001G533200 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.003G273800 IQ calmodulin-binding motif domain containing protein, expressed -
11 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
12 Sobic.010G234800 expressed protein -
13 Sobic.001G205000 ATEB1A-like microtubule associated protein, putative, expressed K10436: microtubule-associated protein, RP/EB family
14 Sobic.001G511200 expressed protein -
15 Sobic.006G129800 ankyrin repeat domain containing protein, expressed -
16 Sobic.006G134200 expressed protein -
17 Sobic.002G154300 serine/threonine-protein kinase receptor precursor, putative, expressed -
18 Sobic.005G210600 expressed protein -
19 Sobic.003G041700 DNA mismatch repair protein MSH6-2, putative, expressed K08737: DNA mismatch repair protein MSH6
20 Sobic.005G140001 - K08235: xyloglucan:xyloglucosyl transferase


Gene co-expression network
sample Sobic009G233500 Sobic009G233500 Sobic004G077100 Sobic004G077100 Sobic009G233500--Sobic004G077100 Sobic004G180400 Sobic004G180400 Sobic009G233500--Sobic004G180400 Sobic001G075400 Sobic001G075400 Sobic009G233500--Sobic001G075400 Sobic007G207700 Sobic007G207700 Sobic009G233500--Sobic007G207700 Sobic006G069500 Sobic006G069500 Sobic009G233500--Sobic006G069500 Sobic005G016300 Sobic005G016300 Sobic009G233500--Sobic005G016300 Sobic003G328500 Sobic003G328500 Sobic009G233500--Sobic003G328500 Sobic007G197700 Sobic007G197700 Sobic009G233500--Sobic007G197700 Sobic001G533200 Sobic001G533200 Sobic009G233500--Sobic001G533200 Sobic004G077100--Sobic001G075400 Sobic004G077100--Sobic009G233500 Sobic004G077100--Sobic006G069500 Sobic004G077100--Sobic004G180400 Sobic003G041700 Sobic003G041700 Sobic004G077100--Sobic003G041700 Sobic004G077100--Sobic005G016300 Sobic003G273800 Sobic003G273800 Sobic004G077100--Sobic003G273800 Sobic010G104400 Sobic010G104400 Sobic004G077100--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic004G077100--Sobic006G214000 Sobic004G180400--Sobic006G069500 Sobic004G180400--Sobic009G233500 Sobic004G180400--Sobic004G077100 Sobic001G511200 Sobic001G511200 Sobic004G180400--Sobic001G511200 Sobic004G180400--Sobic003G273800 Sobic009G178900 Sobic009G178900 Sobic004G180400--Sobic009G178900 Sobic004G180400--Sobic001G533200 Sobic004G180400--Sobic001G075400 Sobic005G210600 Sobic005G210600 Sobic004G180400--Sobic005G210600 Sobic001G075400--Sobic003G328500 Sobic001G075400--Sobic004G077100 Sobic001G177900 Sobic001G177900 Sobic001G075400--Sobic001G177900 Sobic006G134200 Sobic006G134200 Sobic001G075400--Sobic006G134200 Sobic001G075400--Sobic009G233500 Sobic001G075400--Sobic007G207700 Sobic002G313000 Sobic002G313000 Sobic001G075400--Sobic002G313000 Sobic001G075400--Sobic005G016300 Sobic001G131300 Sobic001G131300 Sobic001G075400--Sobic001G131300 Sobic007G207700--Sobic003G328500 Sobic007G207700--Sobic006G134200 Sobic007G207700--Sobic005G016300 Sobic007G017700 Sobic007G017700 Sobic007G207700--Sobic007G017700 Sobic007G207700--Sobic001G075400 Sobic006G179200 Sobic006G179200 Sobic007G207700--Sobic006G179200 Sobic001G091500 Sobic001G091500 Sobic007G207700--Sobic001G091500 Sobic007G207700--Sobic005G210600 Sobic007G207700--Sobic002G313000 Sobic006G069500--Sobic001G511200 Sobic006G069500--Sobic003G273800 Sobic006G069500--Sobic004G180400 Sobic006G069500--Sobic004G077100 Sobic006G069500--Sobic009G178900 Sobic005G188400 Sobic005G188400 Sobic006G069500--Sobic005G188400 Sobic002G237700 Sobic002G237700 Sobic006G069500--Sobic002G237700 Sobic003G364700 Sobic003G364700 Sobic006G069500--Sobic003G364700 Sobic006G069500--Sobic009G233500 Sobic005G016300--Sobic007G207700 Sobic005G016300--Sobic004G077100 Sobic005G016300--Sobic001G075400 Sobic005G016300--Sobic005G210600 Sobic005G016300--Sobic003G328500 Sobic005G016300--Sobic006G134200 Sobic010G111200 Sobic010G111200 Sobic005G016300--Sobic010G111200 Sobic001G205000 Sobic001G205000 Sobic005G016300--Sobic001G205000 Sobic005G016300--Sobic002G313000 Sobic003G328500--Sobic006G134200 Sobic003G328500--Sobic001G177900 Sobic003G328500--Sobic001G075400 Sobic003G328500--Sobic007G207700 Sobic003G387700 Sobic003G387700 Sobic003G328500--Sobic003G387700 Sobic004G257600 Sobic004G257600 Sobic003G328500--Sobic004G257600 Sobic003G260700 Sobic003G260700 Sobic003G328500--Sobic003G260700 Sobic005G144600 Sobic005G144600 Sobic003G328500--Sobic005G144600 Sobic002G426800 Sobic002G426800 Sobic003G328500--Sobic002G426800 Sobic007G197700--Sobic009G233500 Sobic004G307800 Sobic004G307800 Sobic007G197700--Sobic004G307800 Sobic007G197700--Sobic004G077100 Sobic010G234800 Sobic010G234800 Sobic007G197700--Sobic010G234800 Sobic002G279300 Sobic002G279300 Sobic007G197700--Sobic002G279300 Sobic007G197700--Sobic004G180400 Sobic001G458900 Sobic001G458900 Sobic007G197700--Sobic001G458900 Sobic002G293800 Sobic002G293800 Sobic007G197700--Sobic002G293800 Sobic007G197700--Sobic001G075400 Sobic001G533200--Sobic004G180400 Sobic001G533200--Sobic004G077100 Sobic001G533200--Sobic009G233500 Sobic001G533200--Sobic006G069500 Sobic001G533200--Sobic003G273800 Sobic001G533200--Sobic003G041700 Sobic001G533200--Sobic009G178900 Sobic004G117300 Sobic004G117300 Sobic001G533200--Sobic004G117300 Sobic008G113800 Sobic008G113800 Sobic001G533200--Sobic008G113800
Octagon: transcription factors


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