Gene annotation
Transcriptome id Sobic.007G197700.1
Synonym Sb07g026610
Functional annotation BHLH transcription factor, putative, expressed
UniProt C5YI62
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF169
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07340 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os08g41320.1 : BHLH transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a005206
Brachypodium KQJ99071 , KQJ99072 , KQJ90886
Barley HORVU3Hr1G093310.5 , HORVU3Hr1G093310.4 , HORVU3Hr1G093310.1 , HORVU3Hr1G093310.3 , HORVU3Hr1G093310.2 , HORVU7Hr1G052870.9 , HORVU7Hr1G052870.8 , HORVU7Hr1G052870.7 , HORVU7Hr1G052870.6 , HORVU7Hr1G052870.5 , HORVU7Hr1G052870.4 , HORVU7Hr1G052870.2 , HORVU7Hr1G052870.1 , HORVU7Hr1G052870.17 , HORVU7Hr1G052870.16 , HORVU7Hr1G052870.15 , HORVU7Hr1G052870.14 , HORVU7Hr1G052870.13 , HORVU7Hr1G052870.12 , HORVU7Hr1G052870.11 , HORVU7Hr1G052870.10 , HORVU7Hr1G052870.19 , HORVU7Hr1G052870.18 , HORVU7Hr1G052870.3 , HORVU7Hr1G052870.24 , HORVU7Hr1G052870.22 , HORVU7Hr1G052870.23 , HORVU7Hr1G052870.20 , HORVU7Hr1G052870.21
Wheat TraesCS5D02G286300 , TraesCS5D02G286300 , TraesCS5D02G286300 , TraesCS5D02G286300 , TraesCS5D02G286300 , TraesCS5B02G278600 , TraesCS5B02G278600 , TraesCS7A02G256200 , TraesCS7B02G152800 , TraesCS7B02G152800 , TraesCS7D02G257000 , TraesCS7A02G256200 , TraesCS7A02G256200 , TraesCS7D02G257000 , TraesCS7D02G257000
Populus -


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cDNA sequences
Sobic.007G197700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G233500 expressed protein -
2 Sobic.004G307800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659889)@expressed protein -
3 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
4 Sobic.010G234800 expressed protein -
5 Sobic.002G279300 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.004G180400 remorin family protein, putative, expressed -
7 Sobic.001G458900 targeting protein-related, putative, expressed -
8 Sobic.002G293800 expressed protein -
9 Sobic.001G075400 expressed protein -
10 Sobic.001G533200 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.003G047200 expressed protein -
12 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor
13 Sobic.008G156900 similar to Auxin-responsive protein IAA30(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf"(PubMedID : 20499123)@OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
14 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
15 Sobic.006G069500 glutaredoxin, putative, expressed -
16 Sobic.004G063900 expressed protein -
17 Sobic.003G023666 - -
18 Sobic.002G139200 transferase family protein, putative, expressed -
19 Sobic.003G387600 expressed protein K10750: chromatin assembly factor 1 subunit A
20 Sobic.007G207700 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase


Gene co-expression network
sample Sobic007G197700 Sobic007G197700 Sobic009G233500 Sobic009G233500 Sobic007G197700--Sobic009G233500 Sobic004G307800 Sobic004G307800 Sobic007G197700--Sobic004G307800 Sobic004G077100 Sobic004G077100 Sobic007G197700--Sobic004G077100 Sobic010G234800 Sobic010G234800 Sobic007G197700--Sobic010G234800 Sobic002G279300 Sobic002G279300 Sobic007G197700--Sobic002G279300 Sobic004G180400 Sobic004G180400 Sobic007G197700--Sobic004G180400 Sobic001G458900 Sobic001G458900 Sobic007G197700--Sobic001G458900 Sobic002G293800 Sobic002G293800 Sobic007G197700--Sobic002G293800 Sobic001G075400 Sobic001G075400 Sobic007G197700--Sobic001G075400 Sobic009G233500--Sobic004G077100 Sobic009G233500--Sobic004G180400 Sobic009G233500--Sobic001G075400 Sobic007G207700 Sobic007G207700 Sobic009G233500--Sobic007G207700 Sobic006G069500 Sobic006G069500 Sobic009G233500--Sobic006G069500 Sobic005G016300 Sobic005G016300 Sobic009G233500--Sobic005G016300 Sobic003G328500 Sobic003G328500 Sobic009G233500--Sobic003G328500 Sobic009G233500--Sobic007G197700 Sobic001G533200 Sobic001G533200 Sobic009G233500--Sobic001G533200 Sobic002G268300 Sobic002G268300 Sobic004G307800--Sobic002G268300 Sobic006G076000 Sobic006G076000 Sobic004G307800--Sobic006G076000 Sobic001G160100 Sobic001G160100 Sobic004G307800--Sobic001G160100 Sobic005G168400 Sobic005G168400 Sobic004G307800--Sobic005G168400 Sobic002G426000 Sobic002G426000 Sobic004G307800--Sobic002G426000 Sobic010G070900 Sobic010G070900 Sobic004G307800--Sobic010G070900 Sobic003G238800 Sobic003G238800 Sobic004G307800--Sobic003G238800 Sobic010G220800 Sobic010G220800 Sobic004G307800--Sobic010G220800 Sobic004G307800--Sobic010G234800 Sobic004G077100--Sobic001G075400 Sobic004G077100--Sobic009G233500 Sobic004G077100--Sobic006G069500 Sobic004G077100--Sobic004G180400 Sobic003G041700 Sobic003G041700 Sobic004G077100--Sobic003G041700 Sobic004G077100--Sobic005G016300 Sobic003G273800 Sobic003G273800 Sobic004G077100--Sobic003G273800 Sobic010G104400 Sobic010G104400 Sobic004G077100--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic004G077100--Sobic006G214000 Sobic001G098900 Sobic001G098900 Sobic010G234800--Sobic001G098900 Sobic010G215300 Sobic010G215300 Sobic010G234800--Sobic010G215300 Sobic010G202100 Sobic010G202100 Sobic010G234800--Sobic010G202100 Sobic003G047200 Sobic003G047200 Sobic010G234800--Sobic003G047200 Sobic008G114500 Sobic008G114500 Sobic010G234800--Sobic008G114500 Sobic010G234800--Sobic002G293800 Sobic007G017700 Sobic007G017700 Sobic010G234800--Sobic007G017700 Sobic003G414400 Sobic003G414400 Sobic010G234800--Sobic003G414400 Sobic001G140600 Sobic001G140600 Sobic010G234800--Sobic001G140600 Sobic004G115600 Sobic004G115600 Sobic002G279300--Sobic004G115600 Sobic002G279300--Sobic001G458900 Sobic001G331100 Sobic001G331100 Sobic002G279300--Sobic001G331100 Sobic002G279300--Sobic003G047200 Sobic003G300100 Sobic003G300100 Sobic002G279300--Sobic003G300100 Sobic002G279300--Sobic002G293800 Sobic002G279300--Sobic001G098900 Sobic001G077200 Sobic001G077200 Sobic002G279300--Sobic001G077200 Sobic002G279300--Sobic010G234800 Sobic004G180400--Sobic006G069500 Sobic004G180400--Sobic009G233500 Sobic004G180400--Sobic004G077100 Sobic001G511200 Sobic001G511200 Sobic004G180400--Sobic001G511200 Sobic004G180400--Sobic003G273800 Sobic009G178900 Sobic009G178900 Sobic004G180400--Sobic009G178900 Sobic004G180400--Sobic001G533200 Sobic004G180400--Sobic001G075400 Sobic005G210600 Sobic005G210600 Sobic004G180400--Sobic005G210600 Sobic001G458900--Sobic002G279300 Sobic001G458900--Sobic003G047200 Sobic001G458900--Sobic002G293800 Sobic001G458900--Sobic010G234800 Sobic001G458900--Sobic004G115600 Sobic001G458900--Sobic001G098900 Sobic001G458900--Sobic010G215300 Sobic001G284900 Sobic001G284900 Sobic001G458900--Sobic001G284900 Sobic001G458900--Sobic001G077200 Sobic002G293800--Sobic010G234800 Sobic002G293800--Sobic001G098900 Sobic002G293800--Sobic001G458900 Sobic002G293800--Sobic010G215300 Sobic002G293800--Sobic002G279300 Sobic002G293800--Sobic008G114500 Sobic002G293800--Sobic003G047200 Sobic002G293800--Sobic010G202100 Sobic002G293800--Sobic003G414400 Sobic001G075400--Sobic003G328500 Sobic001G075400--Sobic004G077100 Sobic001G177900 Sobic001G177900 Sobic001G075400--Sobic001G177900 Sobic006G134200 Sobic006G134200 Sobic001G075400--Sobic006G134200 Sobic001G075400--Sobic009G233500 Sobic001G075400--Sobic007G207700 Sobic002G313000 Sobic002G313000 Sobic001G075400--Sobic002G313000 Sobic001G075400--Sobic005G016300 Sobic001G131300 Sobic001G131300 Sobic001G075400--Sobic001G131300
Octagon: transcription factors


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