Gene annotation
Transcriptome id Sobic.004G063900.1
Synonym Sb04g005320
Functional annotation expressed protein
UniProt A0A194YN36
Pfam -
Panther DB PTHR33124 PTHR33124:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57780 : -
RAP-DB (Rice) LOC_Os06g44320.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G063900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G198100 expressed protein -
2 Sobic.001G160100 IQ calmodulin-binding motif family protein, putative, expressed -
3 Sobic.004G287700 expressed protein -
4 Sobic.001G477400 AUXIN SIGNALING F-BOX 2, putative, expressed -
5 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
6 Sobic.007G145000 D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed K00058: serA, D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase
7 Sobic.006G065400 expressed protein -
8 Sobic.010G189500 -(PubMedID : 23108465)@MONOCULM 1, putative, expressed -
9 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
10 Sobic.001G491300 tetratricopeptide repeat domain containing protein, expressed -
11 Sobic.010G171800 L-ascorbate oxidase precursor, putative, expressed K00423: L-ascorbate oxidase
12 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
13 Sobic.001G301900 ZOS10-07 - C2H2 zinc finger protein, expressed -
14 Sobic.001G352300 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
15 Sobic.001G029800 expressed protein -
16 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
17 Sobic.004G273000 MYB family transcription factor, putative, expressed -
18 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
19 Sobic.001G091500 expressed protein -
20 Sobic.003G314900 flap endonuclease, putative, expressed K10746: exonuclease 1


Gene co-expression network
sample Sobic004G063900 Sobic004G063900 Sobic004G198100 Sobic004G198100 Sobic004G063900--Sobic004G198100 Sobic001G160100 Sobic001G160100 Sobic004G063900--Sobic001G160100 Sobic004G287700 Sobic004G287700 Sobic004G063900--Sobic004G287700 Sobic001G477400 Sobic001G477400 Sobic004G063900--Sobic001G477400 Sobic004G339500 Sobic004G339500 Sobic004G063900--Sobic004G339500 Sobic007G145000 Sobic007G145000 Sobic004G063900--Sobic007G145000 Sobic006G065400 Sobic006G065400 Sobic004G063900--Sobic006G065400 Sobic010G189500 Sobic010G189500 Sobic004G063900--Sobic010G189500 Sobic003G260700 Sobic003G260700 Sobic004G063900--Sobic003G260700 Sobic004G198100--Sobic003G260700 Sobic010G119300 Sobic010G119300 Sobic004G198100--Sobic010G119300 Sobic001G398400 Sobic001G398400 Sobic004G198100--Sobic001G398400 Sobic008G125700 Sobic008G125700 Sobic004G198100--Sobic008G125700 Sobic004G257600 Sobic004G257600 Sobic004G198100--Sobic004G257600 Sobic001G170800 Sobic001G170800 Sobic004G198100--Sobic001G170800 Sobic004G198100--Sobic004G339500 Sobic002G313000 Sobic002G313000 Sobic004G198100--Sobic002G313000 Sobic004G271300 Sobic004G271300 Sobic004G198100--Sobic004G271300 Sobic003G319900 Sobic003G319900 Sobic001G160100--Sobic003G319900 Sobic004G086500 Sobic004G086500 Sobic001G160100--Sobic004G086500 Sobic005G168400 Sobic005G168400 Sobic001G160100--Sobic005G168400 Sobic006G076000 Sobic006G076000 Sobic001G160100--Sobic006G076000 Sobic001G160100--Sobic006G065400 Sobic002G343600 Sobic002G343600 Sobic001G160100--Sobic002G343600 Sobic007G132900 Sobic007G132900 Sobic001G160100--Sobic007G132900 Sobic004G000800 Sobic004G000800 Sobic001G160100--Sobic004G000800 Sobic004G237000 Sobic004G237000 Sobic001G160100--Sobic004G237000 Sobic010G017400 Sobic010G017400 Sobic004G287700--Sobic010G017400 Sobic004G287700--Sobic001G477400 Sobic002G142200 Sobic002G142200 Sobic004G287700--Sobic002G142200 Sobic001G177900 Sobic001G177900 Sobic004G287700--Sobic001G177900 Sobic004G287700--Sobic004G339500 Sobic010G008900 Sobic010G008900 Sobic004G287700--Sobic010G008900 Sobic002G255500 Sobic002G255500 Sobic004G287700--Sobic002G255500 Sobic004G287700--Sobic001G170800 Sobic003G314900 Sobic003G314900 Sobic004G287700--Sobic003G314900 Sobic005G005700 Sobic005G005700 Sobic001G477400--Sobic005G005700 Sobic001G477400--Sobic001G398400 Sobic008G006800 Sobic008G006800 Sobic001G477400--Sobic008G006800 Sobic006G124400 Sobic006G124400 Sobic001G477400--Sobic006G124400 Sobic001G477400--Sobic004G198100 Sobic001G477400--Sobic010G119300 Sobic004G273000 Sobic004G273000 Sobic001G477400--Sobic004G273000 Sobic001G477400--Sobic004G271300 Sobic001G477400--Sobic003G260700 Sobic004G339500--Sobic003G260700 Sobic004G339500--Sobic008G006800 Sobic004G339500--Sobic001G170800 Sobic004G339500--Sobic001G177900 Sobic004G339500--Sobic010G119300 Sobic003G102000 Sobic003G102000 Sobic004G339500--Sobic003G102000 Sobic004G339500--Sobic004G198100 Sobic004G339500--Sobic008G125700 Sobic004G339500--Sobic005G005700 Sobic007G145000--Sobic001G477400 Sobic007G145000--Sobic003G102000 Sobic007G145000--Sobic003G260700 Sobic007G145000--Sobic004G339500 Sobic007G145000--Sobic004G198100 Sobic007G145000--Sobic004G287700 Sobic001G416000 Sobic001G416000 Sobic007G145000--Sobic001G416000 Sobic007G145000--Sobic010G119300 Sobic007G145000--Sobic005G005700 Sobic006G065400--Sobic010G119300 Sobic006G065400--Sobic007G132900 Sobic006G065400--Sobic004G198100 Sobic009G120700 Sobic009G120700 Sobic006G065400--Sobic009G120700 Sobic001G091500 Sobic001G091500 Sobic006G065400--Sobic001G091500 Sobic006G065400--Sobic005G005700 Sobic006G065400--Sobic001G477400 Sobic006G065400--Sobic001G160100 Sobic006G065400--Sobic003G102000 Sobic010G171800 Sobic010G171800 Sobic010G189500--Sobic010G171800 Sobic006G035600 Sobic006G035600 Sobic010G189500--Sobic006G035600 Sobic009G181500 Sobic009G181500 Sobic010G189500--Sobic009G181500 Sobic009G058100 Sobic009G058100 Sobic010G189500--Sobic009G058100 Sobic010G051100 Sobic010G051100 Sobic010G189500--Sobic010G051100 Sobic001G082800 Sobic001G082800 Sobic010G189500--Sobic001G082800 Sobic004G063600 Sobic004G063600 Sobic010G189500--Sobic004G063600 Sobic010G189500--Sobic004G063900 Sobic010G189500--Sobic010G008900 Sobic003G260700--Sobic001G170800 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic003G260700--Sobic004G198100 Sobic003G260700--Sobic004G271300 Sobic003G260700--Sobic008G006800 Sobic003G260700--Sobic001G177900 Sobic003G260700--Sobic002G313000
Octagon: transcription factors


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