Gene annotation
Transcriptome id Sobic.001G160100.1
Synonym IQD19, Sb01g013960
Functional annotation IQ calmodulin-binding motif family protein, putative, expressed
UniProt C5WS34
Pfam PF13178 PF00612
Panther DB PTHR32295 PTHR32295:SF37
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G14750 : IQ-domain 19
RAP-DB (Rice) LOC_Os03g43580.1 : IQ calmodulin-binding motif family protein, putative, expressed
MaizeGDB (Corn) Zm00025a025301 , Zm00025a030259 , Zm00025a007338
Brachypodium KQK14057 , PNT74401
Barley HORVU5Hr1G093430.2 , HORVU5Hr1G093430.3 , HORVU5Hr1G093430.6 , HORVU5Hr1G093430.7 , HORVU5Hr1G093430.4 , HORVU5Hr1G093430.5 , HORVU5Hr1G093430.8
Wheat TraesCS5B02G381100 , TraesCS5A02G377500 , TraesCS5D02G387500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G319900 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.1 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
2 Sobic.004G086500 expressed protein -
3 Sobic.005G168400 expressed protein -
4 Sobic.006G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@- -
5 Sobic.006G065400 expressed protein -
6 Sobic.002G343600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 23108465)@polygalacturonase inhibitor 1 precursor, putative, expressed -
7 Sobic.007G132900 linker histone H1 and H5 family protein, expressed -
8 Sobic.004G000800 ZOS7-01 - C2H2 zinc finger protein, expressed -
9 Sobic.004G237000 down-regulated TF in developmental senescence(PubMedID : 27586543)@"PGL2(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659886)@helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.006G232900 expressed protein -
11 Sobic.001G393200 expressed protein -
12 Sobic.009G120700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
13 Sobic.010G220800 zinc-binding protein, putative, expressed -
14 Sobic.004G307800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659889)@expressed protein -
15 Sobic.002G268300 3-ketoacyl-CoA synthase precursor, putative, expressed -
16 Sobic.001G313800 B3 DNA binding domain containing protein, expressed -
17 Sobic.003G316601 - -
18 Sobic.001G091500 expressed protein -
19 Sobic.006G253200 IQ calmodulin-binding motif family protein, putative, expressed -
20 Sobic.004G063900 expressed protein -


Gene co-expression network
sample Sobic001G160100 Sobic001G160100 Sobic003G319900 Sobic003G319900 Sobic001G160100--Sobic003G319900 Sobic004G086500 Sobic004G086500 Sobic001G160100--Sobic004G086500 Sobic005G168400 Sobic005G168400 Sobic001G160100--Sobic005G168400 Sobic006G076000 Sobic006G076000 Sobic001G160100--Sobic006G076000 Sobic006G065400 Sobic006G065400 Sobic001G160100--Sobic006G065400 Sobic002G343600 Sobic002G343600 Sobic001G160100--Sobic002G343600 Sobic007G132900 Sobic007G132900 Sobic001G160100--Sobic007G132900 Sobic004G000800 Sobic004G000800 Sobic001G160100--Sobic004G000800 Sobic004G237000 Sobic004G237000 Sobic001G160100--Sobic004G237000 Sobic003G319900--Sobic005G168400 Sobic010G220800 Sobic010G220800 Sobic003G319900--Sobic010G220800 Sobic002G205000 Sobic002G205000 Sobic003G319900--Sobic002G205000 Sobic010G169200 Sobic010G169200 Sobic003G319900--Sobic010G169200 Sobic003G319900--Sobic004G237000 Sobic002G268300 Sobic002G268300 Sobic003G319900--Sobic002G268300 Sobic003G091700 Sobic003G091700 Sobic003G319900--Sobic003G091700 Sobic003G319900--Sobic001G160100 Sobic002G426000 Sobic002G426000 Sobic003G319900--Sobic002G426000 Sobic004G277700 Sobic004G277700 Sobic004G086500--Sobic004G277700 Sobic009G059800 Sobic009G059800 Sobic004G086500--Sobic009G059800 Sobic010G237400 Sobic010G237400 Sobic004G086500--Sobic010G237400 Sobic003G369800 Sobic003G369800 Sobic004G086500--Sobic003G369800 Sobic004G056500 Sobic004G056500 Sobic004G086500--Sobic004G056500 Sobic009G059932 Sobic009G059932 Sobic004G086500--Sobic009G059932 Sobic002G102800 Sobic002G102800 Sobic004G086500--Sobic002G102800 Sobic004G254300 Sobic004G254300 Sobic004G086500--Sobic004G254300 Sobic009G059866 Sobic009G059866 Sobic004G086500--Sobic009G059866 Sobic010G168700 Sobic010G168700 Sobic005G168400--Sobic010G168700 Sobic001G143400 Sobic001G143400 Sobic005G168400--Sobic001G143400 Sobic004G003700 Sobic004G003700 Sobic005G168400--Sobic004G003700 Sobic005G168400--Sobic003G319900 Sobic001G393200 Sobic001G393200 Sobic005G168400--Sobic001G393200 Sobic009G047500 Sobic009G047500 Sobic005G168400--Sobic009G047500 Sobic005G199700 Sobic005G199700 Sobic005G168400--Sobic005G199700 Sobic001G379900 Sobic001G379900 Sobic005G168400--Sobic001G379900 Sobic007G152300 Sobic007G152300 Sobic005G168400--Sobic007G152300 Sobic006G076000--Sobic004G254300 Sobic006G076000--Sobic002G343600 Sobic007G218400 Sobic007G218400 Sobic006G076000--Sobic007G218400 Sobic001G139850 Sobic001G139850 Sobic006G076000--Sobic001G139850 Sobic006G076000--Sobic009G059866 Sobic006G076000--Sobic009G059932 Sobic006G076000--Sobic004G086500 Sobic006G076000--Sobic009G059800 Sobic006G076000--Sobic010G220800 Sobic010G119300 Sobic010G119300 Sobic006G065400--Sobic010G119300 Sobic006G065400--Sobic007G132900 Sobic004G198100 Sobic004G198100 Sobic006G065400--Sobic004G198100 Sobic009G120700 Sobic009G120700 Sobic006G065400--Sobic009G120700 Sobic001G091500 Sobic001G091500 Sobic006G065400--Sobic001G091500 Sobic005G005700 Sobic005G005700 Sobic006G065400--Sobic005G005700 Sobic001G477400 Sobic001G477400 Sobic006G065400--Sobic001G477400 Sobic006G065400--Sobic001G160100 Sobic003G102000 Sobic003G102000 Sobic006G065400--Sobic003G102000 Sobic002G343600--Sobic006G076000 Sobic002G343600--Sobic004G086500 Sobic002G343600--Sobic004G277700 Sobic006G031900 Sobic006G031900 Sobic002G343600--Sobic006G031900 Sobic002G343600--Sobic009G059800 Sobic010G048600 Sobic010G048600 Sobic002G343600--Sobic010G048600 Sobic001G456000 Sobic001G456000 Sobic002G343600--Sobic001G456000 Sobic002G343600--Sobic007G218400 Sobic002G343600--Sobic009G059932 Sobic001G289900 Sobic001G289900 Sobic007G132900--Sobic001G289900 Sobic007G132900--Sobic006G065400 Sobic002G289800 Sobic002G289800 Sobic007G132900--Sobic002G289800 Sobic007G132900--Sobic003G102000 Sobic007G132900--Sobic009G120700 Sobic007G132900--Sobic010G119300 Sobic003G260700 Sobic003G260700 Sobic007G132900--Sobic003G260700 Sobic007G132900--Sobic004G198100 Sobic002G353200 Sobic002G353200 Sobic007G132900--Sobic002G353200 Sobic004G000800--Sobic002G268300 Sobic001G313800 Sobic001G313800 Sobic004G000800--Sobic001G313800 Sobic001G123650 Sobic001G123650 Sobic004G000800--Sobic001G123650 Sobic003G316601 Sobic003G316601 Sobic004G237000--Sobic003G316601 Sobic003G085900 Sobic003G085900 Sobic004G237000--Sobic003G085900 Sobic007G033700 Sobic007G033700 Sobic004G237000--Sobic007G033700 Sobic003G046400 Sobic003G046400 Sobic004G237000--Sobic003G046400 Sobic010G070900 Sobic010G070900 Sobic004G237000--Sobic010G070900 Sobic004G237000--Sobic002G426000 Sobic007G147200 Sobic007G147200 Sobic004G237000--Sobic007G147200 Sobic009G243000 Sobic009G243000 Sobic004G237000--Sobic009G243000 Sobic001G106500 Sobic001G106500 Sobic004G237000--Sobic001G106500
Octagon: transcription factors


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