Gene annotation
Transcriptome id Sobic.010G189500.3
Synonym moc1, Monoculm1, SCL18, LAS, Sb10g023950
Functional annotation - (PubMedID : 23108465)
MONOCULM 1, putative, expressed
UniProt A0A1W0VTV7 , I2AW22
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0010223; secondary shoot formation GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT1G55580 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os06g40780.1 : MONOCULM 1, putative, expressed
MaizeGDB (Corn) Zm00025a019622 , Zm00025a051586
Brachypodium KQK17701 , KQJ93867
Barley HORVU7Hr1G091000.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G171800 L-ascorbate oxidase precursor, putative, expressed K00423: L-ascorbate oxidase
2 Sobic.006G035600 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
3 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
4 Sobic.009G058100 FHA domain containing protein, putative, expressed -
5 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1
6 Sobic.001G082800 ORC5 - Putative origin recognition complex subunit 5, expressed K02607: origin recognition complex subunit 5
7 Sobic.004G063600 CYPRO4, putative, expressed -
8 Sobic.004G063900 expressed protein -
9 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
10 Sobic.007G145000 D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed K00058: serA, D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase
11 Sobic.004G198100 expressed protein -
12 Sobic.003G118100 EMB3013, putative, expressed K17545: serine/threonine-protein kinase ULK4
13 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
14 Sobic.008G034200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
15 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
16 Sobic.006G065400 expressed protein -
17 Sobic.008G148000 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
18 Sobic.006G117000 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
19 Sobic.001G416000 kinesin-related protein, putative, expressed K10398: KIF11, kinesin family member 11
20 Sobic.001G029800 expressed protein -


Gene co-expression network
sample Sobic010G189500 Sobic010G189500 Sobic010G171800 Sobic010G171800 Sobic010G189500--Sobic010G171800 Sobic006G035600 Sobic006G035600 Sobic010G189500--Sobic006G035600 Sobic009G181500 Sobic009G181500 Sobic010G189500--Sobic009G181500 Sobic009G058100 Sobic009G058100 Sobic010G189500--Sobic009G058100 Sobic010G051100 Sobic010G051100 Sobic010G189500--Sobic010G051100 Sobic001G082800 Sobic001G082800 Sobic010G189500--Sobic001G082800 Sobic004G063600 Sobic004G063600 Sobic010G189500--Sobic004G063600 Sobic004G063900 Sobic004G063900 Sobic010G189500--Sobic004G063900 Sobic010G008900 Sobic010G008900 Sobic010G189500--Sobic010G008900 Sobic010G171800--Sobic010G189500 Sobic006G065400 Sobic006G065400 Sobic010G171800--Sobic006G065400 Sobic009G120700 Sobic009G120700 Sobic010G171800--Sobic009G120700 Sobic007G100600 Sobic007G100600 Sobic010G171800--Sobic007G100600 Sobic001G160100 Sobic001G160100 Sobic010G171800--Sobic001G160100 Sobic004G273000 Sobic004G273000 Sobic010G171800--Sobic004G273000 Sobic001G289900 Sobic001G289900 Sobic010G171800--Sobic001G289900 Sobic002G343600 Sobic002G343600 Sobic010G171800--Sobic002G343600 Sobic006G076000 Sobic006G076000 Sobic010G171800--Sobic006G076000 Sobic003G118100 Sobic003G118100 Sobic006G035600--Sobic003G118100 Sobic001G131300 Sobic001G131300 Sobic006G035600--Sobic001G131300 Sobic002G191000 Sobic002G191000 Sobic006G035600--Sobic002G191000 Sobic006G035600--Sobic009G181500 Sobic006G035600--Sobic010G008900 Sobic005G000500 Sobic005G000500 Sobic006G035600--Sobic005G000500 Sobic003G294500 Sobic003G294500 Sobic006G035600--Sobic003G294500 Sobic006G035600--Sobic010G051100 Sobic008G148000 Sobic008G148000 Sobic006G035600--Sobic008G148000 Sobic002G426800 Sobic002G426800 Sobic009G181500--Sobic002G426800 Sobic004G047100 Sobic004G047100 Sobic009G181500--Sobic004G047100 Sobic009G181500--Sobic010G051100 Sobic009G181500--Sobic006G035600 Sobic005G144600 Sobic005G144600 Sobic009G181500--Sobic005G144600 Sobic010G274000 Sobic010G274000 Sobic009G181500--Sobic010G274000 Sobic006G102900 Sobic006G102900 Sobic009G181500--Sobic006G102900 Sobic001G070300 Sobic001G070300 Sobic009G181500--Sobic001G070300 Sobic009G181500--Sobic003G294500 Sobic009G058100--Sobic004G063600 Sobic009G136000 Sobic009G136000 Sobic009G058100--Sobic009G136000 Sobic009G058100--Sobic001G082800 Sobic009G125800 Sobic009G125800 Sobic009G058100--Sobic009G125800 Sobic009G058100--Sobic008G148000 Sobic009G131200 Sobic009G131200 Sobic009G058100--Sobic009G131200 Sobic002G204400 Sobic002G204400 Sobic009G058100--Sobic002G204400 Sobic001G170800 Sobic001G170800 Sobic009G058100--Sobic001G170800 Sobic004G198100 Sobic004G198100 Sobic009G058100--Sobic004G198100 Sobic010G051100--Sobic009G181500 Sobic010G051100--Sobic002G191000 Sobic010G051100--Sobic006G035600 Sobic004G053900 Sobic004G053900 Sobic010G051100--Sobic004G053900 Sobic010G051100--Sobic003G118100 Sobic002G113400 Sobic002G113400 Sobic010G051100--Sobic002G113400 Sobic003G179500 Sobic003G179500 Sobic010G051100--Sobic003G179500 Sobic002G246900 Sobic002G246900 Sobic010G051100--Sobic002G246900 Sobic010G191000 Sobic010G191000 Sobic010G051100--Sobic010G191000 Sobic001G082800--Sobic009G136000 Sobic002G390800 Sobic002G390800 Sobic001G082800--Sobic002G390800 Sobic001G082800--Sobic009G125800 Sobic008G004900 Sobic008G004900 Sobic001G082800--Sobic008G004900 Sobic002G297500 Sobic002G297500 Sobic001G082800--Sobic002G297500 Sobic001G082800--Sobic009G131200 Sobic001G082800--Sobic002G113400 Sobic001G082800--Sobic004G053900 Sobic001G082800--Sobic009G058100 Sobic004G063600--Sobic009G058100 Sobic003G260700 Sobic003G260700 Sobic004G063600--Sobic003G260700 Sobic004G063600--Sobic002G204400 Sobic003G084100 Sobic003G084100 Sobic004G063600--Sobic003G084100 Sobic010G105400 Sobic010G105400 Sobic004G063600--Sobic010G105400 Sobic004G063600--Sobic009G131200 Sobic004G063600--Sobic004G198100 Sobic001G398400 Sobic001G398400 Sobic004G063600--Sobic001G398400 Sobic001G091500 Sobic001G091500 Sobic004G063600--Sobic001G091500 Sobic004G063900--Sobic004G198100 Sobic004G063900--Sobic001G160100 Sobic004G287700 Sobic004G287700 Sobic004G063900--Sobic004G287700 Sobic001G477400 Sobic001G477400 Sobic004G063900--Sobic001G477400 Sobic004G339500 Sobic004G339500 Sobic004G063900--Sobic004G339500 Sobic007G145000 Sobic007G145000 Sobic004G063900--Sobic007G145000 Sobic004G063900--Sobic006G065400 Sobic004G063900--Sobic010G189500 Sobic004G063900--Sobic003G260700 Sobic010G008900--Sobic005G000500 Sobic003G314900 Sobic003G314900 Sobic010G008900--Sobic003G314900 Sobic010G008900--Sobic001G170800 Sobic007G168900 Sobic007G168900 Sobic010G008900--Sobic007G168900 Sobic001G029800 Sobic001G029800 Sobic010G008900--Sobic001G029800 Sobic001G177900 Sobic001G177900 Sobic010G008900--Sobic001G177900 Sobic010G008900--Sobic003G294500 Sobic004G271300 Sobic004G271300 Sobic010G008900--Sobic004G271300 Sobic010G008900--Sobic008G148000
Octagon: transcription factors


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