Gene annotation
Transcriptome id Sobic.008G034200.1
Synonym Sb08g002940, ATAHL1, AHL1
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
DNA binding protein, putative, expressed
UniProt C5YRP3
Pfam PF03479
Panther DB PTHR31500:SF14 PTHR31500
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12080 : AT-hook motif nuclear-localized protein 1
RAP-DB (Rice) LOC_Os11g05160.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a033461 , Zm00025a013027
Brachypodium KQJ92297
Barley HORVU5Hr1G041290.11 , HORVU5Hr1G041290.10 , HORVU5Hr1G041290.13 , HORVU5Hr1G041290.12 , HORVU5Hr1G041290.5 , HORVU5Hr1G041290.4 , HORVU5Hr1G041290.7 , HORVU5Hr1G041290.6
Wheat TraesCS5A02G130500 , TraesCS5B02G130400 , TraesCS5D02G138000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G131200 expressed protein -
2 Sobic.004G063600 CYPRO4, putative, expressed -
3 Sobic.009G125800 expressed protein -
4 Sobic.001G082800 ORC5 - Putative origin recognition complex subunit 5, expressed K02607: origin recognition complex subunit 5
5 Sobic.001G289900 AT hook motif domain containing protein, expressed -
6 Sobic.009G220000 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase
7 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
8 Sobic.010G189500 -(PubMedID : 23108465)@MONOCULM 1, putative, expressed -
9 Sobic.009G058100 FHA domain containing protein, putative, expressed -
10 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
11 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1
12 Sobic.004G077900 YIF1B, putative, expressed -
13 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.003G084100 expressed protein -
15 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
16 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
17 Sobic.002G390800 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
18 Sobic.006G102900 expressed protein -
19 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
20 Sobic.002G297500 coiled-coil domain-containing protein 111, putative, expressed -


Gene co-expression network
sample Sobic008G034200 Sobic008G034200 Sobic009G131200 Sobic009G131200 Sobic008G034200--Sobic009G131200 Sobic004G063600 Sobic004G063600 Sobic008G034200--Sobic004G063600 Sobic009G125800 Sobic009G125800 Sobic008G034200--Sobic009G125800 Sobic001G082800 Sobic001G082800 Sobic008G034200--Sobic001G082800 Sobic001G289900 Sobic001G289900 Sobic008G034200--Sobic001G289900 Sobic009G220000 Sobic009G220000 Sobic008G034200--Sobic009G220000 Sobic009G181500 Sobic009G181500 Sobic008G034200--Sobic009G181500 Sobic010G189500 Sobic010G189500 Sobic008G034200--Sobic010G189500 Sobic009G058100 Sobic009G058100 Sobic008G034200--Sobic009G058100 Sobic009G131200--Sobic009G125800 Sobic008G004900 Sobic008G004900 Sobic009G131200--Sobic008G004900 Sobic009G131200--Sobic001G082800 Sobic009G136000 Sobic009G136000 Sobic009G131200--Sobic009G136000 Sobic009G131200--Sobic004G063600 Sobic004G117400 Sobic004G117400 Sobic009G131200--Sobic004G117400 Sobic009G131200--Sobic009G058100 Sobic001G069700 Sobic001G069700 Sobic009G131200--Sobic001G069700 Sobic010G009700 Sobic010G009700 Sobic009G131200--Sobic010G009700 Sobic004G063600--Sobic009G058100 Sobic003G260700 Sobic003G260700 Sobic004G063600--Sobic003G260700 Sobic002G204400 Sobic002G204400 Sobic004G063600--Sobic002G204400 Sobic003G084100 Sobic003G084100 Sobic004G063600--Sobic003G084100 Sobic010G105400 Sobic010G105400 Sobic004G063600--Sobic010G105400 Sobic004G063600--Sobic009G131200 Sobic004G198100 Sobic004G198100 Sobic004G063600--Sobic004G198100 Sobic001G398400 Sobic001G398400 Sobic004G063600--Sobic001G398400 Sobic001G091500 Sobic001G091500 Sobic004G063600--Sobic001G091500 Sobic009G125800--Sobic009G136000 Sobic009G125800--Sobic004G117400 Sobic009G125800--Sobic001G082800 Sobic009G125800--Sobic009G131200 Sobic002G390800 Sobic002G390800 Sobic009G125800--Sobic002G390800 Sobic009G125800--Sobic010G009700 Sobic007G146200 Sobic007G146200 Sobic009G125800--Sobic007G146200 Sobic008G188800 Sobic008G188800 Sobic009G125800--Sobic008G188800 Sobic009G214500 Sobic009G214500 Sobic009G125800--Sobic009G214500 Sobic001G082800--Sobic009G136000 Sobic001G082800--Sobic002G390800 Sobic001G082800--Sobic009G125800 Sobic001G082800--Sobic008G004900 Sobic002G297500 Sobic002G297500 Sobic001G082800--Sobic002G297500 Sobic001G082800--Sobic009G131200 Sobic002G113400 Sobic002G113400 Sobic001G082800--Sobic002G113400 Sobic004G053900 Sobic004G053900 Sobic001G082800--Sobic004G053900 Sobic001G082800--Sobic009G058100 Sobic001G289900--Sobic010G105400 Sobic002G289800 Sobic002G289800 Sobic001G289900--Sobic002G289800 Sobic007G132900 Sobic007G132900 Sobic001G289900--Sobic007G132900 Sobic003G387700 Sobic003G387700 Sobic001G289900--Sobic003G387700 Sobic004G047100 Sobic004G047100 Sobic001G289900--Sobic004G047100 Sobic001G289900--Sobic001G398400 Sobic004G273000 Sobic004G273000 Sobic001G289900--Sobic004G273000 Sobic001G289900--Sobic001G091500 Sobic002G426800 Sobic002G426800 Sobic001G289900--Sobic002G426800 Sobic007G048700 Sobic007G048700 Sobic009G220000--Sobic007G048700 Sobic003G075200 Sobic003G075200 Sobic009G220000--Sobic003G075200 Sobic004G069400 Sobic004G069400 Sobic009G220000--Sobic004G069400 Sobic006G271000 Sobic006G271000 Sobic009G220000--Sobic006G271000 Sobic003G261100 Sobic003G261100 Sobic009G220000--Sobic003G261100 Sobic004G356300 Sobic004G356300 Sobic009G220000--Sobic004G356300 Sobic002G352200 Sobic002G352200 Sobic009G220000--Sobic002G352200 Sobic004G007700 Sobic004G007700 Sobic009G220000--Sobic004G007700 Sobic001G135200 Sobic001G135200 Sobic009G220000--Sobic001G135200 Sobic009G181500--Sobic002G426800 Sobic009G181500--Sobic004G047100 Sobic010G051100 Sobic010G051100 Sobic009G181500--Sobic010G051100 Sobic006G035600 Sobic006G035600 Sobic009G181500--Sobic006G035600 Sobic005G144600 Sobic005G144600 Sobic009G181500--Sobic005G144600 Sobic010G274000 Sobic010G274000 Sobic009G181500--Sobic010G274000 Sobic006G102900 Sobic006G102900 Sobic009G181500--Sobic006G102900 Sobic001G070300 Sobic001G070300 Sobic009G181500--Sobic001G070300 Sobic003G294500 Sobic003G294500 Sobic009G181500--Sobic003G294500 Sobic010G171800 Sobic010G171800 Sobic010G189500--Sobic010G171800 Sobic010G189500--Sobic006G035600 Sobic010G189500--Sobic009G181500 Sobic010G189500--Sobic009G058100 Sobic010G189500--Sobic010G051100 Sobic010G189500--Sobic001G082800 Sobic010G189500--Sobic004G063600 Sobic004G063900 Sobic004G063900 Sobic010G189500--Sobic004G063900 Sobic010G008900 Sobic010G008900 Sobic010G189500--Sobic010G008900 Sobic009G058100--Sobic004G063600 Sobic009G058100--Sobic009G136000 Sobic009G058100--Sobic001G082800 Sobic009G058100--Sobic009G125800 Sobic008G148000 Sobic008G148000 Sobic009G058100--Sobic008G148000 Sobic009G058100--Sobic009G131200 Sobic009G058100--Sobic002G204400 Sobic001G170800 Sobic001G170800 Sobic009G058100--Sobic001G170800 Sobic009G058100--Sobic004G198100
Octagon: transcription factors


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