Gene annotation
Transcriptome id Sobic.003G023666.1
Synonym -
Functional annotation -
UniProt A0A1W0VVF9
Pfam PF12222
Panther DB PTHR31104 PTHR31104:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14920 : Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
RAP-DB (Rice) LOC_Os01g10960.1 : peptide-N4-asparagine amidase A, putative, expressed
MaizeGDB (Corn) Zm00025a017590
Brachypodium KQK03251 , KQK03250
Barley HORVU5Hr1G009220.1 , HORVU5Hr1G009220.2 , HORVU6Hr1G085000.1 , HORVU5Hr1G116810.1 , HORVU1Hr1G013870.2 , HORVU1Hr1G013870.1 , HORVU3Hr1G029240.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G430000 basic helix-loop-helix, putative, expressed -
2 Sobic.008G037200 expressed protein -
3 Sobic.004G049800 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.003G184500 carboxyl-terminal peptidase, putative, expressed -
5 Sobic.007G224800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.001G511200 expressed protein -
7 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
8 Sobic.006G069500 glutaredoxin, putative, expressed -
9 Sobic.003G273800 IQ calmodulin-binding motif domain containing protein, expressed -
10 Sobic.006G271100 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
11 Sobic.002G359800 GRAS family transcription factor domain containing protein, expressed -
12 Sobic.004G296100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G533200 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.004G180400 remorin family protein, putative, expressed -
15 Sobic.003G016800 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.010G036200 expressed protein -
17 Sobic.009G233500 expressed protein -
18 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
19 Sobic.003G041700 DNA mismatch repair protein MSH6-2, putative, expressed K08737: DNA mismatch repair protein MSH6
20 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic003G023666 Sobic003G023666 Sobic001G430000 Sobic001G430000 Sobic003G023666--Sobic001G430000 Sobic008G037200 Sobic008G037200 Sobic003G023666--Sobic008G037200 Sobic004G049800 Sobic004G049800 Sobic003G023666--Sobic004G049800 Sobic003G184500 Sobic003G184500 Sobic003G023666--Sobic003G184500 Sobic007G224800 Sobic007G224800 Sobic003G023666--Sobic007G224800 Sobic001G511200 Sobic001G511200 Sobic003G023666--Sobic001G511200 Sobic004G077100 Sobic004G077100 Sobic003G023666--Sobic004G077100 Sobic006G069500 Sobic006G069500 Sobic003G023666--Sobic006G069500 Sobic003G273800 Sobic003G273800 Sobic003G023666--Sobic003G273800 Sobic001G430000--Sobic007G224800 Sobic002G359800 Sobic002G359800 Sobic001G430000--Sobic002G359800 Sobic010G036200 Sobic010G036200 Sobic001G430000--Sobic010G036200 Sobic002G184800 Sobic002G184800 Sobic001G430000--Sobic002G184800 Sobic001G430000--Sobic003G184500 Sobic001G430000--Sobic008G037200 Sobic003G201300 Sobic003G201300 Sobic001G430000--Sobic003G201300 Sobic001G430000--Sobic003G023666 Sobic008G127200 Sobic008G127200 Sobic001G430000--Sobic008G127200 Sobic001G038400 Sobic001G038400 Sobic008G037200--Sobic001G038400 Sobic008G037200--Sobic001G430000 Sobic004G025200 Sobic004G025200 Sobic008G037200--Sobic004G025200 Sobic008G037200--Sobic007G224800 Sobic008G037200--Sobic003G023666 Sobic001G413700 Sobic001G413700 Sobic008G037200--Sobic001G413700 Sobic008G037200--Sobic010G036200 Sobic008G037200--Sobic002G359800 Sobic008G037200--Sobic003G184500 Sobic004G296100 Sobic004G296100 Sobic004G049800--Sobic004G296100 Sobic006G271100 Sobic006G271100 Sobic004G049800--Sobic006G271100 Sobic009G070000 Sobic009G070000 Sobic004G049800--Sobic009G070000 Sobic003G047300 Sobic003G047300 Sobic004G049800--Sobic003G047300 Sobic004G049800--Sobic001G430000 Sobic004G049800--Sobic001G511200 Sobic004G049800--Sobic003G023666 Sobic004G049800--Sobic008G127200 Sobic003G364700 Sobic003G364700 Sobic004G049800--Sobic003G364700 Sobic003G184500--Sobic001G430000 Sobic001G399400 Sobic001G399400 Sobic003G184500--Sobic001G399400 Sobic008G107600 Sobic008G107600 Sobic003G184500--Sobic008G107600 Sobic003G184500--Sobic006G271100 Sobic003G184500--Sobic002G359800 Sobic003G184500--Sobic002G184800 Sobic003G399400 Sobic003G399400 Sobic003G184500--Sobic003G399400 Sobic002G219500 Sobic002G219500 Sobic003G184500--Sobic002G219500 Sobic003G184500--Sobic003G023666 Sobic007G224800--Sobic003G201300 Sobic008G078600 Sobic008G078600 Sobic007G224800--Sobic008G078600 Sobic009G116766 Sobic009G116766 Sobic007G224800--Sobic009G116766 Sobic007G224800--Sobic001G430000 Sobic007G224800--Sobic010G036200 Sobic005G087600 Sobic005G087600 Sobic007G224800--Sobic005G087600 Sobic001G361500 Sobic001G361500 Sobic007G224800--Sobic001G361500 Sobic009G164200 Sobic009G164200 Sobic007G224800--Sobic009G164200 Sobic003G026100 Sobic003G026100 Sobic007G224800--Sobic003G026100 Sobic001G511200--Sobic006G069500 Sobic001G511200--Sobic003G364700 Sobic009G229100 Sobic009G229100 Sobic001G511200--Sobic009G229100 Sobic001G511200--Sobic003G273800 Sobic009G178900 Sobic009G178900 Sobic001G511200--Sobic009G178900 Sobic002G356700 Sobic002G356700 Sobic001G511200--Sobic002G356700 Sobic009G233600 Sobic009G233600 Sobic001G511200--Sobic009G233600 Sobic001G511200--Sobic008G127200 Sobic001G511200--Sobic003G201300 Sobic001G075400 Sobic001G075400 Sobic004G077100--Sobic001G075400 Sobic009G233500 Sobic009G233500 Sobic004G077100--Sobic009G233500 Sobic004G077100--Sobic006G069500 Sobic004G180400 Sobic004G180400 Sobic004G077100--Sobic004G180400 Sobic003G041700 Sobic003G041700 Sobic004G077100--Sobic003G041700 Sobic005G016300 Sobic005G016300 Sobic004G077100--Sobic005G016300 Sobic004G077100--Sobic003G273800 Sobic010G104400 Sobic010G104400 Sobic004G077100--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic004G077100--Sobic006G214000 Sobic006G069500--Sobic001G511200 Sobic006G069500--Sobic003G273800 Sobic006G069500--Sobic004G180400 Sobic006G069500--Sobic004G077100 Sobic006G069500--Sobic009G178900 Sobic005G188400 Sobic005G188400 Sobic006G069500--Sobic005G188400 Sobic002G237700 Sobic002G237700 Sobic006G069500--Sobic002G237700 Sobic006G069500--Sobic003G364700 Sobic006G069500--Sobic009G233500 Sobic003G273800--Sobic006G069500 Sobic003G273800--Sobic002G237700 Sobic003G273800--Sobic001G511200 Sobic003G273800--Sobic009G178900 Sobic003G273800--Sobic009G233600 Sobic003G273800--Sobic004G077100 Sobic003G273800--Sobic004G180400 Sobic003G273800--Sobic005G188400 Sobic001G059900 Sobic001G059900 Sobic003G273800--Sobic001G059900
Octagon: transcription factors


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