Gene annotation
Transcriptome id Sobic.003G016800.1
Synonym Sb03g001670
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XKG0
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF243
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G45910 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g11700.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a037597 , Zm00025a043264
Brachypodium -
Barley HORVU3Hr1G116910.1
Wheat TraesCS1B02G333800 , TraesCS1B02G145300 , TraesCS1D02G127400 , TraesCS3A02G535400 , TraesCS3D02G541000 , TraesCS1A02G126100 , TraesCS3B02G608400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G023666 - -
2 Sobic.008G037200 expressed protein -
3 Sobic.002G045800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
4 Sobic.001G430000 basic helix-loop-helix, putative, expressed -
5 Sobic.004G025200 expressed protein -
6 Sobic.006G166900 transferase family protein, putative, expressed -
7 Sobic.001G038400 expressed protein -
8 Sobic.007G224800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.002G359800 GRAS family transcription factor domain containing protein, expressed -
10 Sobic.005G229100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
11 Sobic.001G535400 remorin, putative, expressed -
12 Sobic.003G341200 expressed protein -
13 Sobic.004G049800 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.007G114700 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
15 Sobic.004G243500 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.002G184800 expressed protein -
17 Sobic.001G443000 ZOS3-06 - C2H2 zinc finger protein, expressed -
18 Sobic.004G300701 - -
19 Sobic.002G187400 serine/threonine-protein kinase, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
20 Sobic.003G022800 ribosomal protein L23 family protein, putative, expressed K02892: RP-L23, MRPL23, large subunit ribosomal protein L23


Gene co-expression network
sample Sobic003G016800 Sobic003G016800 Sobic003G023666 Sobic003G023666 Sobic003G016800--Sobic003G023666 Sobic008G037200 Sobic008G037200 Sobic003G016800--Sobic008G037200 Sobic002G045800 Sobic002G045800 Sobic003G016800--Sobic002G045800 Sobic001G430000 Sobic001G430000 Sobic003G016800--Sobic001G430000 Sobic004G025200 Sobic004G025200 Sobic003G016800--Sobic004G025200 Sobic006G166900 Sobic006G166900 Sobic003G016800--Sobic006G166900 Sobic001G038400 Sobic001G038400 Sobic003G016800--Sobic001G038400 Sobic007G224800 Sobic007G224800 Sobic003G016800--Sobic007G224800 Sobic002G359800 Sobic002G359800 Sobic003G016800--Sobic002G359800 Sobic003G023666--Sobic001G430000 Sobic003G023666--Sobic008G037200 Sobic004G049800 Sobic004G049800 Sobic003G023666--Sobic004G049800 Sobic003G184500 Sobic003G184500 Sobic003G023666--Sobic003G184500 Sobic003G023666--Sobic007G224800 Sobic001G511200 Sobic001G511200 Sobic003G023666--Sobic001G511200 Sobic004G077100 Sobic004G077100 Sobic003G023666--Sobic004G077100 Sobic006G069500 Sobic006G069500 Sobic003G023666--Sobic006G069500 Sobic003G273800 Sobic003G273800 Sobic003G023666--Sobic003G273800 Sobic008G037200--Sobic001G038400 Sobic008G037200--Sobic001G430000 Sobic008G037200--Sobic004G025200 Sobic008G037200--Sobic007G224800 Sobic008G037200--Sobic003G023666 Sobic001G413700 Sobic001G413700 Sobic008G037200--Sobic001G413700 Sobic010G036200 Sobic010G036200 Sobic008G037200--Sobic010G036200 Sobic008G037200--Sobic002G359800 Sobic008G037200--Sobic003G184500 Sobic004G147400 Sobic004G147400 Sobic002G045800--Sobic004G147400 Sobic002G045800--Sobic008G037200 Sobic005G061700 Sobic005G061700 Sobic002G045800--Sobic005G061700 Sobic002G045800--Sobic003G023666 Sobic002G045800--Sobic001G413700 Sobic002G045800--Sobic003G016800 SobicK009800 SobicK009800 Sobic002G045800--SobicK009800 Sobic001G484000 Sobic001G484000 Sobic002G045800--Sobic001G484000 Sobic001G535400 Sobic001G535400 Sobic002G045800--Sobic001G535400 Sobic001G430000--Sobic007G224800 Sobic001G430000--Sobic002G359800 Sobic001G430000--Sobic010G036200 Sobic002G184800 Sobic002G184800 Sobic001G430000--Sobic002G184800 Sobic001G430000--Sobic003G184500 Sobic001G430000--Sobic008G037200 Sobic003G201300 Sobic003G201300 Sobic001G430000--Sobic003G201300 Sobic001G430000--Sobic003G023666 Sobic008G127200 Sobic008G127200 Sobic001G430000--Sobic008G127200 Sobic010G030100 Sobic010G030100 Sobic004G025200--Sobic010G030100 Sobic002G420200 Sobic002G420200 Sobic004G025200--Sobic002G420200 Sobic009G165300 Sobic009G165300 Sobic004G025200--Sobic009G165300 Sobic004G025200--Sobic008G037200 Sobic004G025200--Sobic001G038400 Sobic006G134001 Sobic006G134001 Sobic004G025200--Sobic006G134001 Sobic001G216800 Sobic001G216800 Sobic004G025200--Sobic001G216800 Sobic006G000400 Sobic006G000400 Sobic004G025200--Sobic006G000400 Sobic003G283500 Sobic003G283500 Sobic004G025200--Sobic003G283500 Sobic007G008400 Sobic007G008400 Sobic006G166900--Sobic007G008400 Sobic003G062000 Sobic003G062000 Sobic006G166900--Sobic003G062000 Sobic004G296100 Sobic004G296100 Sobic006G166900--Sobic004G296100 Sobic002G003200 Sobic002G003200 Sobic006G166900--Sobic002G003200 Sobic006G001000 Sobic006G001000 Sobic006G166900--Sobic006G001000 Sobic003G031400 Sobic003G031400 Sobic006G166900--Sobic003G031400 Sobic009G226900 Sobic009G226900 Sobic006G166900--Sobic009G226900 Sobic008G164900 Sobic008G164900 Sobic006G166900--Sobic008G164900 Sobic006G166900--Sobic008G037200 Sobic010G260600 Sobic010G260600 Sobic001G038400--Sobic010G260600 Sobic001G038400--Sobic002G184800 Sobic001G038400--Sobic002G359800 Sobic001G038400--Sobic008G037200 Sobic001G038400--Sobic009G165300 Sobic001G038400--Sobic001G430000 Sobic001G038400--Sobic001G413700 Sobic005G116300 Sobic005G116300 Sobic001G038400--Sobic005G116300 Sobic001G038400--Sobic004G025200 Sobic007G224800--Sobic003G201300 Sobic008G078600 Sobic008G078600 Sobic007G224800--Sobic008G078600 Sobic009G116766 Sobic009G116766 Sobic007G224800--Sobic009G116766 Sobic007G224800--Sobic001G430000 Sobic007G224800--Sobic010G036200 Sobic005G087600 Sobic005G087600 Sobic007G224800--Sobic005G087600 Sobic001G361500 Sobic001G361500 Sobic007G224800--Sobic001G361500 Sobic009G164200 Sobic009G164200 Sobic007G224800--Sobic009G164200 Sobic003G026100 Sobic003G026100 Sobic007G224800--Sobic003G026100 Sobic002G359800--Sobic002G184800 Sobic002G359800--Sobic001G430000 Sobic002G359800--Sobic001G038400 Sobic002G359800--Sobic003G184500 Sobic002G359800--Sobic010G260600 Sobic004G129700 Sobic004G129700 Sobic002G359800--Sobic004G129700 Sobic002G359800--Sobic010G036200 Sobic002G359800--Sobic009G165300 Sobic002G359800--Sobic008G037200
Octagon: transcription factors


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