Gene annotation
Transcriptome id Sobic.007G114700.4,Sobic.007G114700.3,Sobic.007G114700.7,Sobic.007G114700.5,Sobic.007G114700.6
Synonym Sb07g019050
Functional annotation mTERF domain containing protein, expressed
UniProt A0A1Z5RA87
Pfam PF02536
Panther DB PTHR13068:SF28 PTHR13068 PTHR13068 PTHR13068:SF28
NCBI CDD KOG1267; Mitochondrial transcription termination factor, mTERF
KEGG Orthology K15032; mTERF domain-containing protein, mitochondrial
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005739mitochondrion GO:0003690double-stranded DNA binding GO:0003690double-stranded DNA binding GO:0005739mitochondrion GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT5G07900 : Mitochondrial transcription termination factor family protein
RAP-DB (Rice) LOC_Os07g24090.1 : mTERF domain containing protein, expressed
MaizeGDB (Corn) Zm00025a030955
Brachypodium KQK14426
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G213600 expressed protein -
2 Sobic.010G145200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CPuORF31 - conserved peptide uORF-containing transcript, expressed -
3 Sobic.001G511200 expressed protein -
4 Sobic.007G224800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.003G201300 hsp20/alpha crystallin family protein, putative, expressed -
6 Sobic.005G087600 AP2 domain containing protein, expressed -
7 Sobic.001G430000 basic helix-loop-helix, putative, expressed -
8 Sobic.003G423100 NAM, putative, expressed -
9 Sobic.004G300701 - -
10 Sobic.009G167300 CCT motif family protein, expressed -
11 Sobic.008G127200 expressed protein -
12 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
13 Sobic.003G273800 IQ calmodulin-binding motif domain containing protein, expressed -
14 Sobic.004G356600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.009G116766 - -
16 Sobic.003G299400 - -
17 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
18 Sobic.009G233600 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
19 Sobic.006G239100 VQ domain containing protein, putative, expressed -
20 Sobic.002G205201 - -


Gene co-expression network
sample Sobic007G114700 Sobic007G114700 Sobic003G213600 Sobic003G213600 Sobic007G114700--Sobic003G213600 Sobic010G145200 Sobic010G145200 Sobic007G114700--Sobic010G145200 Sobic001G511200 Sobic001G511200 Sobic007G114700--Sobic001G511200 Sobic007G224800 Sobic007G224800 Sobic007G114700--Sobic007G224800 Sobic003G201300 Sobic003G201300 Sobic007G114700--Sobic003G201300 Sobic005G087600 Sobic005G087600 Sobic007G114700--Sobic005G087600 Sobic001G430000 Sobic001G430000 Sobic007G114700--Sobic001G430000 Sobic003G423100 Sobic003G423100 Sobic007G114700--Sobic003G423100 Sobic004G300701 Sobic004G300701 Sobic007G114700--Sobic004G300701 Sobic010G045200 Sobic010G045200 Sobic003G213600--Sobic010G045200 Sobic003G337100 Sobic003G337100 Sobic003G213600--Sobic003G337100 Sobic003G213600--Sobic007G114700 Sobic001G388900 Sobic001G388900 Sobic003G213600--Sobic001G388900 Sobic010G258600 Sobic010G258600 Sobic003G213600--Sobic010G258600 Sobic003G198701 Sobic003G198701 Sobic003G213600--Sobic003G198701 Sobic009G167300 Sobic009G167300 Sobic003G213600--Sobic009G167300 Sobic009G244000 Sobic009G244000 Sobic003G213600--Sobic009G244000 Sobic002G326000 Sobic002G326000 Sobic003G213600--Sobic002G326000 Sobic002G004400 Sobic002G004400 Sobic010G145200--Sobic002G004400 Sobic003G178200 Sobic003G178200 Sobic010G145200--Sobic003G178200 Sobic007G072901 Sobic007G072901 Sobic010G145200--Sobic007G072901 Sobic003G245700 Sobic003G245700 Sobic010G145200--Sobic003G245700 Sobic002G356700 Sobic002G356700 Sobic010G145200--Sobic002G356700 Sobic005G189400 Sobic005G189400 Sobic010G145200--Sobic005G189400 Sobic001G361500 Sobic001G361500 Sobic010G145200--Sobic001G361500 Sobic006G090201 Sobic006G090201 Sobic010G145200--Sobic006G090201 Sobic003G343100 Sobic003G343100 Sobic010G145200--Sobic003G343100 Sobic006G069500 Sobic006G069500 Sobic001G511200--Sobic006G069500 Sobic003G364700 Sobic003G364700 Sobic001G511200--Sobic003G364700 Sobic009G229100 Sobic009G229100 Sobic001G511200--Sobic009G229100 Sobic003G273800 Sobic003G273800 Sobic001G511200--Sobic003G273800 Sobic009G178900 Sobic009G178900 Sobic001G511200--Sobic009G178900 Sobic001G511200--Sobic002G356700 Sobic009G233600 Sobic009G233600 Sobic001G511200--Sobic009G233600 Sobic008G127200 Sobic008G127200 Sobic001G511200--Sobic008G127200 Sobic001G511200--Sobic003G201300 Sobic007G224800--Sobic003G201300 Sobic008G078600 Sobic008G078600 Sobic007G224800--Sobic008G078600 Sobic009G116766 Sobic009G116766 Sobic007G224800--Sobic009G116766 Sobic007G224800--Sobic001G430000 Sobic010G036200 Sobic010G036200 Sobic007G224800--Sobic010G036200 Sobic007G224800--Sobic005G087600 Sobic007G224800--Sobic001G361500 Sobic009G164200 Sobic009G164200 Sobic007G224800--Sobic009G164200 Sobic003G026100 Sobic003G026100 Sobic007G224800--Sobic003G026100 Sobic003G201300--Sobic008G078600 Sobic003G201300--Sobic001G361500 Sobic003G201300--Sobic009G164200 Sobic003G201300--Sobic009G116766 Sobic003G201300--Sobic007G224800 Sobic003G201300--Sobic009G167300 Sobic006G209100 Sobic006G209100 Sobic003G201300--Sobic006G209100 Sobic003G201300--Sobic005G087600 Sobic010G231400 Sobic010G231400 Sobic003G201300--Sobic010G231400 Sobic005G087600--Sobic003G026100 Sobic005G087600--Sobic001G361500 Sobic005G087600--Sobic009G164200 Sobic005G087600--Sobic010G231400 Sobic006G185400 Sobic006G185400 Sobic005G087600--Sobic006G185400 Sobic005G087600--Sobic006G090201 Sobic005G087600--Sobic006G209100 Sobic004G330500 Sobic004G330500 Sobic005G087600--Sobic004G330500 Sobic005G087600--Sobic005G189400 Sobic001G430000--Sobic007G224800 Sobic002G359800 Sobic002G359800 Sobic001G430000--Sobic002G359800 Sobic001G430000--Sobic010G036200 Sobic002G184800 Sobic002G184800 Sobic001G430000--Sobic002G184800 Sobic003G184500 Sobic003G184500 Sobic001G430000--Sobic003G184500 Sobic008G037200 Sobic008G037200 Sobic001G430000--Sobic008G037200 Sobic001G430000--Sobic003G201300 Sobic003G023666 Sobic003G023666 Sobic001G430000--Sobic003G023666 Sobic001G430000--Sobic008G127200 Sobic002G205201 Sobic002G205201 Sobic003G423100--Sobic002G205201 Sobic005G022400 Sobic005G022400 Sobic003G423100--Sobic005G022400 Sobic003G423100--Sobic003G245700 Sobic003G423100--Sobic006G090201 Sobic003G423100--Sobic005G189400 Sobic003G423100--Sobic004G330500 Sobic003G423100--Sobic006G185400 Sobic007G152200 Sobic007G152200 Sobic003G423100--Sobic007G152200 Sobic003G423100--Sobic001G361500 Sobic003G283500 Sobic003G283500 Sobic004G300701--Sobic003G283500 Sobic004G300701--Sobic007G224800 Sobic004G300701--Sobic001G430000 Sobic010G099400 Sobic010G099400 Sobic004G300701--Sobic010G099400 Sobic004G342900 Sobic004G342900 Sobic004G300701--Sobic004G342900 Sobic004G300701--Sobic003G337100 Sobic010G013100 Sobic010G013100 Sobic004G300701--Sobic010G013100 Sobic005G016600 Sobic005G016600 Sobic004G300701--Sobic005G016600 Sobic004G300701--Sobic003G201300
Octagon: transcription factors


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