Gene annotation
Transcriptome id Sobic.001G038400.1
Synonym TBL34, Sb01g003530
Functional annotation expressed protein
UniProt C5WV50
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38320 : TRICHOME BIREFRINGENCE-LIKE 34
RAP-DB (Rice) LOC_Os03g60300.1 : expressed protein
MaizeGDB (Corn) Zm00025a016450 , Zm00025a037141 , Zm00025a053664 , Zm00025a004540
Brachypodium KQK10416 , KQK14489 , KQK12473 , KQK12472 , KQK12471 , PNT65594 , PNT73896
Barley HORVU3Hr1G087740.5 , HORVU3Hr1G087740.3 , HORVU3Hr1G087740.2 , HORVU3Hr1G087740.1 , HORVU2Hr1G014140.8 , HORVU2Hr1G014140.9 , HORVU2Hr1G014140.1 , HORVU2Hr1G014140.2 , HORVU2Hr1G014140.3 , HORVU2Hr1G014140.4 , HORVU2Hr1G014140.5 , HORVU2Hr1G014140.6 , HORVU2Hr1G014140.7 , HORVU2Hr1G014140.10 , HORVU5Hr1G112220.3 , HORVU5Hr1G112220.2 , HORVU5Hr1G112220.1 , HORVU5Hr1G112220.7 , HORVU5Hr1G112220.6 , HORVU5Hr1G112220.5 , HORVU5Hr1G112220.4 , HORVU5Hr1G112220.9 , HORVU5Hr1G112220.8
Wheat TraesCS3B02G382900 , TraesCS5A02G473100 , TraesCS7A02G494100 , TraesCS2A02G086900 , TraesCS5A02G473100 , TraesCS5B02G486000 , TraesCS5B02G486000 , TraesCS3A02G350400 , TraesCS5D02G485800 , TraesCS5A02G473000 , TraesCS3D02G344400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G260600 CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
2 Sobic.002G184800 expressed protein -
3 Sobic.002G359800 GRAS family transcription factor domain containing protein, expressed -
4 Sobic.008G037200 expressed protein -
5 Sobic.009G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G430000 basic helix-loop-helix, putative, expressed -
7 Sobic.001G413700 white-brown complex homolog protein, putative, expressed -
8 Sobic.005G116300 similar to Expressed protein(PubMedID : 24655390)@similar to Expressed protein(PubMedID : 24655390)@expressed protein -
9 Sobic.004G025200 expressed protein -
10 Sobic.010G036200 expressed protein -
11 Sobic.001G403200 receptor-like kinase RHG1, putative, expressed -
12 Sobic.002G420200 proline-rich protein, putative, expressed -
13 Sobic.001G144700 LTPL71 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.010G246200 ABC transporter, ATP-binding protein, putative, expressed -
15 Sobic.006G134001 - -
16 Sobic.004G129700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
17 Sobic.002G020500 ternary complex factor MIP1, putative, expressed -
18 Sobic.003G184500 carboxyl-terminal peptidase, putative, expressed -
19 Sobic.007G224800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.004G323100 SCP-like extracellular protein, expressed -


Gene co-expression network
sample Sobic001G038400 Sobic001G038400 Sobic010G260600 Sobic010G260600 Sobic001G038400--Sobic010G260600 Sobic002G184800 Sobic002G184800 Sobic001G038400--Sobic002G184800 Sobic002G359800 Sobic002G359800 Sobic001G038400--Sobic002G359800 Sobic008G037200 Sobic008G037200 Sobic001G038400--Sobic008G037200 Sobic009G165300 Sobic009G165300 Sobic001G038400--Sobic009G165300 Sobic001G430000 Sobic001G430000 Sobic001G038400--Sobic001G430000 Sobic001G413700 Sobic001G413700 Sobic001G038400--Sobic001G413700 Sobic005G116300 Sobic005G116300 Sobic001G038400--Sobic005G116300 Sobic004G025200 Sobic004G025200 Sobic001G038400--Sobic004G025200 Sobic010G260600--Sobic001G038400 Sobic010G260600--Sobic009G165300 Sobic010G260600--Sobic005G116300 Sobic002G420200 Sobic002G420200 Sobic010G260600--Sobic002G420200 Sobic010G260600--Sobic002G184800 Sobic006G134001 Sobic006G134001 Sobic010G260600--Sobic006G134001 Sobic010G260600--Sobic001G413700 Sobic010G260600--Sobic002G359800 Sobic010G246200 Sobic010G246200 Sobic010G260600--Sobic010G246200 Sobic002G184800--Sobic002G359800 Sobic002G184800--Sobic001G038400 Sobic002G184800--Sobic001G430000 Sobic002G184800--Sobic010G260600 Sobic003G184500 Sobic003G184500 Sobic002G184800--Sobic003G184500 Sobic002G184800--Sobic009G165300 Sobic001G403200 Sobic001G403200 Sobic002G184800--Sobic001G403200 Sobic004G129700 Sobic004G129700 Sobic002G184800--Sobic004G129700 Sobic010G036200 Sobic010G036200 Sobic002G184800--Sobic010G036200 Sobic002G359800--Sobic002G184800 Sobic002G359800--Sobic001G430000 Sobic002G359800--Sobic001G038400 Sobic002G359800--Sobic003G184500 Sobic002G359800--Sobic010G260600 Sobic002G359800--Sobic004G129700 Sobic002G359800--Sobic010G036200 Sobic002G359800--Sobic009G165300 Sobic002G359800--Sobic008G037200 Sobic008G037200--Sobic001G038400 Sobic008G037200--Sobic001G430000 Sobic008G037200--Sobic004G025200 Sobic007G224800 Sobic007G224800 Sobic008G037200--Sobic007G224800 Sobic003G023666 Sobic003G023666 Sobic008G037200--Sobic003G023666 Sobic008G037200--Sobic001G413700 Sobic008G037200--Sobic010G036200 Sobic008G037200--Sobic002G359800 Sobic008G037200--Sobic003G184500 Sobic009G165300--Sobic002G420200 Sobic009G165300--Sobic006G134001 Sobic009G165300--Sobic010G260600 Sobic009G165300--Sobic001G038400 Sobic009G165300--Sobic004G025200 Sobic009G165300--Sobic002G184800 Sobic003G121500 Sobic003G121500 Sobic009G165300--Sobic003G121500 Sobic009G165300--Sobic002G359800 Sobic003G283500 Sobic003G283500 Sobic009G165300--Sobic003G283500 Sobic001G430000--Sobic007G224800 Sobic001G430000--Sobic002G359800 Sobic001G430000--Sobic010G036200 Sobic001G430000--Sobic002G184800 Sobic001G430000--Sobic003G184500 Sobic001G430000--Sobic008G037200 Sobic003G201300 Sobic003G201300 Sobic001G430000--Sobic003G201300 Sobic001G430000--Sobic003G023666 Sobic008G127200 Sobic008G127200 Sobic001G430000--Sobic008G127200 Sobic010G093300 Sobic010G093300 Sobic001G413700--Sobic010G093300 Sobic005G127200 Sobic005G127200 Sobic001G413700--Sobic005G127200 Sobic002G409000 Sobic002G409000 Sobic001G413700--Sobic002G409000 Sobic002G030800 Sobic002G030800 Sobic001G413700--Sobic002G030800 Sobic006G224500 Sobic006G224500 Sobic001G413700--Sobic006G224500 Sobic001G068500 Sobic001G068500 Sobic001G413700--Sobic001G068500 Sobic001G471800 Sobic001G471800 Sobic001G413700--Sobic001G471800 Sobic001G059600 Sobic001G059600 Sobic001G413700--Sobic001G059600 Sobic009G006300 Sobic009G006300 Sobic001G413700--Sobic009G006300 Sobic005G116300--Sobic010G260600 Sobic005G116300--Sobic001G413700 Sobic005G116300--Sobic001G038400 Sobic005G069500 Sobic005G069500 Sobic005G116300--Sobic005G069500 Sobic005G116300--Sobic002G409000 Sobic005G206000 Sobic005G206000 Sobic005G116300--Sobic005G206000 Sobic001G301000 Sobic001G301000 Sobic005G116300--Sobic001G301000 Sobic003G322100 Sobic003G322100 Sobic005G116300--Sobic003G322100 Sobic010G268700 Sobic010G268700 Sobic005G116300--Sobic010G268700 Sobic010G030100 Sobic010G030100 Sobic004G025200--Sobic010G030100 Sobic004G025200--Sobic002G420200 Sobic004G025200--Sobic009G165300 Sobic004G025200--Sobic008G037200 Sobic004G025200--Sobic001G038400 Sobic004G025200--Sobic006G134001 Sobic001G216800 Sobic001G216800 Sobic004G025200--Sobic001G216800 Sobic006G000400 Sobic006G000400 Sobic004G025200--Sobic006G000400 Sobic004G025200--Sobic003G283500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.