Gene annotation
Transcriptome id Sobic.005G116300.1
Synonym Sb05g016820,
Functional annotation similar to Expressed protein (PubMedID : 24655390)
similar to Expressed protein (PubMedID : 24655390)
expressed protein
UniProt C5Y2G0
Pfam -
Panther DB PTHR14237
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23520 : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
RAP-DB (Rice) LOC_Os11g29630.1 : expressed protein
MaizeGDB (Corn) Zm00025a029726
Brachypodium KQJ88509
Barley HORVU3Hr1G026350.4 , HORVU3Hr1G026350.1 , HORVU3Hr1G026350.3 , HORVU3Hr1G026350.2
Wheat TraesCS3A02G138700 , TraesCS3B02G156300 , TraesCS3D02G139000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G260600 CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
2 Sobic.001G413700 white-brown complex homolog protein, putative, expressed -
3 Sobic.001G038400 expressed protein -
4 Sobic.005G069500 OsWAK92 - OsWAK receptor-like protein kinase, expressed -
5 Sobic.002G409000 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.005G206000 dirigent, putative, expressed -
7 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
8 Sobic.003G322100 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
9 Sobic.010G268700 expansin precursor, putative, expressed -
10 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.008G164450 - -
12 Sobic.005G216600 plant protein of unknown function domain containing protein, expressed -
13 Sobic.003G053600 hydrolase, alpha/beta fold family protein, putative, expressed -
14 Sobic.006G224500 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
16 Sobic.010G031700 thaumatin, putative, expressed -
17 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
18 Sobic.002G420200 proline-rich protein, putative, expressed -
19 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
20 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase


Gene co-expression network
sample Sobic005G116300 Sobic005G116300 Sobic010G260600 Sobic010G260600 Sobic005G116300--Sobic010G260600 Sobic001G413700 Sobic001G413700 Sobic005G116300--Sobic001G413700 Sobic001G038400 Sobic001G038400 Sobic005G116300--Sobic001G038400 Sobic005G069500 Sobic005G069500 Sobic005G116300--Sobic005G069500 Sobic002G409000 Sobic002G409000 Sobic005G116300--Sobic002G409000 Sobic005G206000 Sobic005G206000 Sobic005G116300--Sobic005G206000 Sobic001G301000 Sobic001G301000 Sobic005G116300--Sobic001G301000 Sobic003G322100 Sobic003G322100 Sobic005G116300--Sobic003G322100 Sobic010G268700 Sobic010G268700 Sobic005G116300--Sobic010G268700 Sobic010G260600--Sobic001G038400 Sobic009G165300 Sobic009G165300 Sobic010G260600--Sobic009G165300 Sobic010G260600--Sobic005G116300 Sobic002G420200 Sobic002G420200 Sobic010G260600--Sobic002G420200 Sobic002G184800 Sobic002G184800 Sobic010G260600--Sobic002G184800 Sobic006G134001 Sobic006G134001 Sobic010G260600--Sobic006G134001 Sobic010G260600--Sobic001G413700 Sobic002G359800 Sobic002G359800 Sobic010G260600--Sobic002G359800 Sobic010G246200 Sobic010G246200 Sobic010G260600--Sobic010G246200 Sobic010G093300 Sobic010G093300 Sobic001G413700--Sobic010G093300 Sobic005G127200 Sobic005G127200 Sobic001G413700--Sobic005G127200 Sobic001G413700--Sobic002G409000 Sobic002G030800 Sobic002G030800 Sobic001G413700--Sobic002G030800 Sobic006G224500 Sobic006G224500 Sobic001G413700--Sobic006G224500 Sobic001G068500 Sobic001G068500 Sobic001G413700--Sobic001G068500 Sobic001G471800 Sobic001G471800 Sobic001G413700--Sobic001G471800 Sobic001G059600 Sobic001G059600 Sobic001G413700--Sobic001G059600 Sobic009G006300 Sobic009G006300 Sobic001G413700--Sobic009G006300 Sobic001G038400--Sobic010G260600 Sobic001G038400--Sobic002G184800 Sobic001G038400--Sobic002G359800 Sobic008G037200 Sobic008G037200 Sobic001G038400--Sobic008G037200 Sobic001G038400--Sobic009G165300 Sobic001G430000 Sobic001G430000 Sobic001G038400--Sobic001G430000 Sobic001G038400--Sobic001G413700 Sobic001G038400--Sobic005G116300 Sobic004G025200 Sobic004G025200 Sobic001G038400--Sobic004G025200 Sobic004G009200 Sobic004G009200 Sobic005G069500--Sobic004G009200 Sobic002G391900 Sobic002G391900 Sobic005G069500--Sobic002G391900 Sobic003G382200 Sobic003G382200 Sobic005G069500--Sobic003G382200 Sobic005G069500--Sobic003G322100 Sobic009G106100 Sobic009G106100 Sobic005G069500--Sobic009G106100 Sobic010G152500 Sobic010G152500 Sobic005G069500--Sobic010G152500 Sobic005G069500--Sobic006G224500 Sobic007G073000 Sobic007G073000 Sobic005G069500--Sobic007G073000 Sobic005G177400 Sobic005G177400 Sobic005G069500--Sobic005G177400 Sobic002G409000--Sobic001G413700 Sobic003G368100 Sobic003G368100 Sobic002G409000--Sobic003G368100 Sobic002G409000--Sobic010G093300 Sobic010G115700 Sobic010G115700 Sobic002G409000--Sobic010G115700 Sobic002G409000--Sobic001G068500 Sobic002G409000--Sobic005G069500 Sobic002G409000--Sobic001G059600 Sobic002G365801 Sobic002G365801 Sobic002G409000--Sobic002G365801 Sobic002G409000--Sobic006G224500 Sobic005G206000--Sobic001G301000 Sobic005G206000--Sobic010G268700 Sobic008G010500 Sobic008G010500 Sobic005G206000--Sobic008G010500 Sobic001G231800 Sobic001G231800 Sobic005G206000--Sobic001G231800 Sobic005G177100 Sobic005G177100 Sobic005G206000--Sobic005G177100 Sobic010G245400 Sobic010G245400 Sobic005G206000--Sobic010G245400 Sobic006G097900 Sobic006G097900 Sobic005G206000--Sobic006G097900 Sobic003G053600 Sobic003G053600 Sobic005G206000--Sobic003G053600 Sobic004G002901 Sobic004G002901 Sobic005G206000--Sobic004G002901 Sobic001G301000--Sobic001G231800 Sobic001G301000--Sobic008G010500 Sobic004G121600 Sobic004G121600 Sobic001G301000--Sobic004G121600 Sobic003G441700 Sobic003G441700 Sobic001G301000--Sobic003G441700 Sobic005G119900 Sobic005G119900 Sobic001G301000--Sobic005G119900 Sobic003G053200 Sobic003G053200 Sobic001G301000--Sobic003G053200 Sobic001G301000--Sobic010G268700 Sobic001G301000--Sobic010G245400 Sobic001G301000--Sobic006G097900 Sobic003G322100--Sobic007G073000 Sobic010G152400 Sobic010G152400 Sobic003G322100--Sobic010G152400 Sobic010G082000 Sobic010G082000 Sobic003G322100--Sobic010G082000 Sobic003G322100--Sobic005G177400 Sobic006G092700 Sobic006G092700 Sobic003G322100--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic003G322100--Sobic006G135300 Sobic003G240400 Sobic003G240400 Sobic003G322100--Sobic003G240400 Sobic003G215300 Sobic003G215300 Sobic003G322100--Sobic003G215300 Sobic004G322000 Sobic004G322000 Sobic003G322100--Sobic004G322000 Sobic010G268700--Sobic006G097900 Sobic005G060200 Sobic005G060200 Sobic010G268700--Sobic005G060200 Sobic010G268700--Sobic001G301000 Sobic005G216600 Sobic005G216600 Sobic010G268700--Sobic005G216600 Sobic001G293100 Sobic001G293100 Sobic010G268700--Sobic001G293100 Sobic005G197500 Sobic005G197500 Sobic010G268700--Sobic005G197500 Sobic010G268700--Sobic008G010500 Sobic010G268700--Sobic004G002901 Sobic003G161400 Sobic003G161400 Sobic010G268700--Sobic003G161400
Octagon: transcription factors


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