Gene annotation
Transcriptome id Sobic.002G420200.2,Sobic.002G420200.3
Synonym Sb02g043175
Functional annotation proline-rich protein, putative, expressed
UniProt C5X5N8
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF139
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03380 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os07g48390.1 : proline-rich protein, putative, expressed
MaizeGDB (Corn) Zm00025a049182
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.006G134001 - -
3 Sobic.010G260600 CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
4 Sobic.004G025200 expressed protein -
5 Sobic.005G016600 DUF567 domain containing protein, putative, expressed -
6 Sobic.001G038400 expressed protein -
7 Sobic.003G043700 expressed protein -
8 Sobic.003G121500 expressed protein -
9 Sobic.003G152200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
11 Sobic.004G105100 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.010G246200 ABC transporter, ATP-binding protein, putative, expressed -
13 Sobic.001G161601 - K14484: auxin-responsive protein IAA
14 Sobic.003G283500 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
15 Sobic.005G080400 1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
16 Sobic.009G199001 - -
17 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
18 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
19 Sobic.003G057600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.010G030100 homeobox associated leucine zipper, putative, expressed -


Gene co-expression network
sample Sobic002G420200 Sobic002G420200 Sobic009G165300 Sobic009G165300 Sobic002G420200--Sobic009G165300 Sobic006G134001 Sobic006G134001 Sobic002G420200--Sobic006G134001 Sobic010G260600 Sobic010G260600 Sobic002G420200--Sobic010G260600 Sobic004G025200 Sobic004G025200 Sobic002G420200--Sobic004G025200 Sobic005G016600 Sobic005G016600 Sobic002G420200--Sobic005G016600 Sobic001G038400 Sobic001G038400 Sobic002G420200--Sobic001G038400 Sobic003G043700 Sobic003G043700 Sobic002G420200--Sobic003G043700 Sobic003G121500 Sobic003G121500 Sobic002G420200--Sobic003G121500 Sobic003G152200 Sobic003G152200 Sobic002G420200--Sobic003G152200 Sobic009G165300--Sobic002G420200 Sobic009G165300--Sobic006G134001 Sobic009G165300--Sobic010G260600 Sobic009G165300--Sobic001G038400 Sobic009G165300--Sobic004G025200 Sobic002G184800 Sobic002G184800 Sobic009G165300--Sobic002G184800 Sobic009G165300--Sobic003G121500 Sobic002G359800 Sobic002G359800 Sobic009G165300--Sobic002G359800 Sobic003G283500 Sobic003G283500 Sobic009G165300--Sobic003G283500 Sobic006G134001--Sobic002G420200 Sobic006G134001--Sobic009G165300 Sobic006G134001--Sobic003G121500 Sobic004G105100 Sobic004G105100 Sobic006G134001--Sobic004G105100 Sobic008G011700 Sobic008G011700 Sobic006G134001--Sobic008G011700 Sobic004G038700 Sobic004G038700 Sobic006G134001--Sobic004G038700 Sobic006G134001--Sobic010G260600 Sobic003G228600 Sobic003G228600 Sobic006G134001--Sobic003G228600 Sobic003G236600 Sobic003G236600 Sobic006G134001--Sobic003G236600 Sobic010G260600--Sobic001G038400 Sobic010G260600--Sobic009G165300 Sobic005G116300 Sobic005G116300 Sobic010G260600--Sobic005G116300 Sobic010G260600--Sobic002G420200 Sobic010G260600--Sobic002G184800 Sobic010G260600--Sobic006G134001 Sobic001G413700 Sobic001G413700 Sobic010G260600--Sobic001G413700 Sobic010G260600--Sobic002G359800 Sobic010G246200 Sobic010G246200 Sobic010G260600--Sobic010G246200 Sobic010G030100 Sobic010G030100 Sobic004G025200--Sobic010G030100 Sobic004G025200--Sobic002G420200 Sobic004G025200--Sobic009G165300 Sobic008G037200 Sobic008G037200 Sobic004G025200--Sobic008G037200 Sobic004G025200--Sobic001G038400 Sobic004G025200--Sobic006G134001 Sobic001G216800 Sobic001G216800 Sobic004G025200--Sobic001G216800 Sobic006G000400 Sobic006G000400 Sobic004G025200--Sobic006G000400 Sobic004G025200--Sobic003G283500 Sobic005G016600--Sobic002G420200 Sobic002G253000 Sobic002G253000 Sobic005G016600--Sobic002G253000 Sobic010G256500 Sobic010G256500 Sobic005G016600--Sobic010G256500 Sobic004G342900 Sobic004G342900 Sobic005G016600--Sobic004G342900 Sobic005G016600--Sobic003G283500 Sobic004G300701 Sobic004G300701 Sobic005G016600--Sobic004G300701 Sobic005G139075 Sobic005G139075 Sobic005G016600--Sobic005G139075 Sobic002G350700 Sobic002G350700 Sobic005G016600--Sobic002G350700 Sobic002G318501 Sobic002G318501 Sobic005G016600--Sobic002G318501 Sobic001G038400--Sobic010G260600 Sobic001G038400--Sobic002G184800 Sobic001G038400--Sobic002G359800 Sobic001G038400--Sobic008G037200 Sobic001G038400--Sobic009G165300 Sobic001G430000 Sobic001G430000 Sobic001G038400--Sobic001G430000 Sobic001G038400--Sobic001G413700 Sobic001G038400--Sobic005G116300 Sobic001G038400--Sobic004G025200 Sobic001G161601 Sobic001G161601 Sobic003G043700--Sobic001G161601 Sobic004G042000 Sobic004G042000 Sobic003G043700--Sobic004G042000 Sobic002G213600 Sobic002G213600 Sobic003G043700--Sobic002G213600 Sobic001G111000 Sobic001G111000 Sobic003G043700--Sobic001G111000 Sobic003G016100 Sobic003G016100 Sobic003G043700--Sobic003G016100 Sobic001G161500 Sobic001G161500 Sobic003G043700--Sobic001G161500 Sobic003G219800 Sobic003G219800 Sobic003G043700--Sobic003G219800 Sobic009G035300 Sobic009G035300 Sobic003G043700--Sobic009G035300 Sobic003G316000 Sobic003G316000 Sobic003G043700--Sobic003G316000 Sobic003G360600 Sobic003G360600 Sobic003G121500--Sobic003G360600 Sobic007G176000 Sobic007G176000 Sobic003G121500--Sobic007G176000 Sobic007G165400 Sobic007G165400 Sobic003G121500--Sobic007G165400 Sobic010G115700 Sobic010G115700 Sobic003G121500--Sobic010G115700 Sobic008G055100 Sobic008G055100 Sobic003G121500--Sobic008G055100 Sobic003G121500--Sobic006G134001 Sobic002G001700 Sobic002G001700 Sobic003G121500--Sobic002G001700 Sobic010G106500 Sobic010G106500 Sobic003G121500--Sobic010G106500 Sobic001G453900 Sobic001G453900 Sobic003G121500--Sobic001G453900 Sobic006G256900 Sobic006G256900 Sobic003G152200--Sobic006G256900 Sobic001G147900 Sobic001G147900 Sobic003G152200--Sobic001G147900 Sobic002G042200 Sobic002G042200 Sobic003G152200--Sobic002G042200 Sobic004G024100 Sobic004G024100 Sobic003G152200--Sobic004G024100 Sobic005G065900 Sobic005G065900 Sobic003G152200--Sobic005G065900 Sobic003G404600 Sobic003G404600 Sobic003G152200--Sobic003G404600 Sobic003G015300 Sobic003G015300 Sobic003G152200--Sobic003G015300 Sobic003G368600 Sobic003G368600 Sobic003G152200--Sobic003G368600 Sobic006G243600 Sobic006G243600 Sobic003G152200--Sobic006G243600
Octagon: transcription factors


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