Gene annotation
Transcriptome id Sobic.010G246200.2,Sobic.010G246200.1
Synonym AtSTAR1, NAP3, ATNAP3, Sb10g028530
Functional annotation ABC transporter, ATP-binding protein, putative, expressed
UniProt C5Z8U4 , C5Z8T0
Pfam PF00005
Panther DB PTHR24220
NCBI CDD KOG2355; Predicted ABC-type transport, ATPase component/CCR4 associated factor
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT1G67940 : non-intrinsic ABC protein 3
RAP-DB (Rice) LOC_Os06g48060.1 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a018306
Brachypodium KQK17333
Barley HORVU7Hr1G098490.3 , HORVU7Hr1G098490.2 , HORVU7Hr1G098490.1 , HORVU7Hr1G098490.7 , HORVU7Hr1G098490.6 , HORVU7Hr1G098490.5 , HORVU7Hr1G098490.4 , HORVU7Hr1G098490.9 , HORVU7Hr1G098490.8 , HORVU7Hr1G098490.12 , HORVU7Hr1G098490.11 , HORVU7Hr1G098490.10 , HORVU4Hr1G079940.3 , HORVU4Hr1G079940.2 , HORVU4Hr1G079940.1 , HORVU4Hr1G079940.7 , HORVU4Hr1G079940.6 , HORVU4Hr1G079940.5 , HORVU4Hr1G079940.4 , HORVU4Hr1G079940.9 , HORVU4Hr1G079940.13 , HORVU4Hr1G079940.12 , HORVU4Hr1G079940.11 , HORVU4Hr1G079940.10
Wheat TraesCS7B02G327900 , TraesCS4B02G336400 , TraesCS4A02G414400 , TraesCS7A02G427700 , TraesCS4B02G315100 , TraesCS4D02G332100 , TraesCS7D02G420100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G260600 CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
2 Sobic.001G038400 expressed protein -
3 Sobic.002G420200 proline-rich protein, putative, expressed -
4 Sobic.009G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G324600 transcription factor-related, putative, expressed -
6 Sobic.003G121500 expressed protein -
7 Sobic.004G323300 SCP-like extracellular protein, expressed -
8 Sobic.006G134001 - -
9 Sobic.004G322100 hypro1, putative, expressed -
10 Sobic.004G029100 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
11 Sobic.010G152400 glycosyltransferase, putative, expressed -
12 Sobic.004G176800 chaperone protein dnaJ 10, putative, expressed -
13 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
14 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
15 Sobic.003G057600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
17 Sobic.007G050200 DNA binding protein, putative, expressed -
18 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
19 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
20 Sobic.005G116300 similar to Expressed protein(PubMedID : 24655390)@similar to Expressed protein(PubMedID : 24655390)@expressed protein -


Gene co-expression network
sample Sobic010G246200 Sobic010G246200 Sobic010G260600 Sobic010G260600 Sobic010G246200--Sobic010G260600 Sobic001G038400 Sobic001G038400 Sobic010G246200--Sobic001G038400 Sobic002G420200 Sobic002G420200 Sobic010G246200--Sobic002G420200 Sobic009G165300 Sobic009G165300 Sobic010G246200--Sobic009G165300 Sobic003G324600 Sobic003G324600 Sobic010G246200--Sobic003G324600 Sobic003G121500 Sobic003G121500 Sobic010G246200--Sobic003G121500 Sobic004G323300 Sobic004G323300 Sobic010G246200--Sobic004G323300 Sobic006G134001 Sobic006G134001 Sobic010G246200--Sobic006G134001 Sobic004G322100 Sobic004G322100 Sobic010G246200--Sobic004G322100 Sobic010G260600--Sobic001G038400 Sobic010G260600--Sobic009G165300 Sobic005G116300 Sobic005G116300 Sobic010G260600--Sobic005G116300 Sobic010G260600--Sobic002G420200 Sobic002G184800 Sobic002G184800 Sobic010G260600--Sobic002G184800 Sobic010G260600--Sobic006G134001 Sobic001G413700 Sobic001G413700 Sobic010G260600--Sobic001G413700 Sobic002G359800 Sobic002G359800 Sobic010G260600--Sobic002G359800 Sobic010G260600--Sobic010G246200 Sobic001G038400--Sobic010G260600 Sobic001G038400--Sobic002G184800 Sobic001G038400--Sobic002G359800 Sobic008G037200 Sobic008G037200 Sobic001G038400--Sobic008G037200 Sobic001G038400--Sobic009G165300 Sobic001G430000 Sobic001G430000 Sobic001G038400--Sobic001G430000 Sobic001G038400--Sobic001G413700 Sobic001G038400--Sobic005G116300 Sobic004G025200 Sobic004G025200 Sobic001G038400--Sobic004G025200 Sobic002G420200--Sobic009G165300 Sobic002G420200--Sobic006G134001 Sobic002G420200--Sobic010G260600 Sobic002G420200--Sobic004G025200 Sobic005G016600 Sobic005G016600 Sobic002G420200--Sobic005G016600 Sobic002G420200--Sobic001G038400 Sobic003G043700 Sobic003G043700 Sobic002G420200--Sobic003G043700 Sobic002G420200--Sobic003G121500 Sobic003G152200 Sobic003G152200 Sobic002G420200--Sobic003G152200 Sobic009G165300--Sobic002G420200 Sobic009G165300--Sobic006G134001 Sobic009G165300--Sobic010G260600 Sobic009G165300--Sobic001G038400 Sobic009G165300--Sobic004G025200 Sobic009G165300--Sobic002G184800 Sobic009G165300--Sobic003G121500 Sobic009G165300--Sobic002G359800 Sobic003G283500 Sobic003G283500 Sobic009G165300--Sobic003G283500 Sobic004G112200 Sobic004G112200 Sobic003G324600--Sobic004G112200 Sobic003G419300 Sobic003G419300 Sobic003G324600--Sobic003G419300 Sobic002G239700 Sobic002G239700 Sobic003G324600--Sobic002G239700 Sobic009G058600 Sobic009G058600 Sobic003G324600--Sobic009G058600 Sobic008G035800 Sobic008G035800 Sobic003G324600--Sobic008G035800 Sobic006G201000 Sobic006G201000 Sobic003G324600--Sobic006G201000 Sobic001G232000 Sobic001G232000 Sobic003G324600--Sobic001G232000 Sobic001G307600 Sobic001G307600 Sobic003G324600--Sobic001G307600 Sobic004G214300 Sobic004G214300 Sobic003G324600--Sobic004G214300 Sobic003G360600 Sobic003G360600 Sobic003G121500--Sobic003G360600 Sobic007G176000 Sobic007G176000 Sobic003G121500--Sobic007G176000 Sobic007G165400 Sobic007G165400 Sobic003G121500--Sobic007G165400 Sobic010G115700 Sobic010G115700 Sobic003G121500--Sobic010G115700 Sobic008G055100 Sobic008G055100 Sobic003G121500--Sobic008G055100 Sobic003G121500--Sobic006G134001 Sobic002G001700 Sobic002G001700 Sobic003G121500--Sobic002G001700 Sobic010G106500 Sobic010G106500 Sobic003G121500--Sobic010G106500 Sobic001G453900 Sobic001G453900 Sobic003G121500--Sobic001G453900 Sobic004G323300--Sobic004G322100 Sobic001G238200 Sobic001G238200 Sobic004G323300--Sobic001G238200 Sobic003G064800 Sobic003G064800 Sobic004G323300--Sobic003G064800 Sobic003G140700 Sobic003G140700 Sobic004G323300--Sobic003G140700 Sobic006G227500 Sobic006G227500 Sobic004G323300--Sobic006G227500 Sobic004G306900 Sobic004G306900 Sobic004G323300--Sobic004G306900 Sobic007G050200 Sobic007G050200 Sobic004G323300--Sobic007G050200 Sobic001G229000 Sobic001G229000 Sobic004G323300--Sobic001G229000 Sobic007G086300 Sobic007G086300 Sobic004G323300--Sobic007G086300 Sobic006G134001--Sobic002G420200 Sobic006G134001--Sobic009G165300 Sobic006G134001--Sobic003G121500 Sobic004G105100 Sobic004G105100 Sobic006G134001--Sobic004G105100 Sobic008G011700 Sobic008G011700 Sobic006G134001--Sobic008G011700 Sobic004G038700 Sobic004G038700 Sobic006G134001--Sobic004G038700 Sobic006G134001--Sobic010G260600 Sobic003G228600 Sobic003G228600 Sobic006G134001--Sobic003G228600 Sobic003G236600 Sobic003G236600 Sobic006G134001--Sobic003G236600 Sobic003G000100 Sobic003G000100 Sobic004G322100--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic004G322100--Sobic010G152400 Sobic004G322100--Sobic003G140700 Sobic004G322100--Sobic004G323300 Sobic004G322100--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic004G322100--Sobic006G019700 Sobic004G029100 Sobic004G029100 Sobic004G322100--Sobic004G029100 Sobic006G028500 Sobic006G028500 Sobic004G322100--Sobic006G028500 Sobic004G110700 Sobic004G110700 Sobic004G322100--Sobic004G110700
Octagon: transcription factors


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