Gene annotation
Transcriptome id Sobic.004G323100.1
Synonym Sb04g035320
Functional annotation SCP-like extracellular protein, expressed
UniProt C5XU94
Pfam PF00188
Panther DB PTHR10334 PTHR10334:SF222
NCBI CDD KOG3017; Defense-related protein containing SCP domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57625 : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RAP-DB (Rice) LOC_Os02g54540.1 : SCP-like extracellular protein, expressed
MaizeGDB (Corn) Zm00025a022392
Brachypodium -
Barley HORVU6Hr1G083310.1 , HORVU6Hr1G083310.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G403200 receptor-like kinase RHG1, putative, expressed -
2 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
3 Sobic.004G025200 expressed protein -
4 Sobic.008G107600 expressed protein -
5 Sobic.003G151900 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.004G129700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
7 Sobic.001G038400 expressed protein -
8 Sobic.003G041700 DNA mismatch repair protein MSH6-2, putative, expressed K08737: DNA mismatch repair protein MSH6
9 Sobic.003G184500 carboxyl-terminal peptidase, putative, expressed -
10 Sobic.010G030100 homeobox associated leucine zipper, putative, expressed -
11 Sobic.002G359800 GRAS family transcription factor domain containing protein, expressed -
12 Sobic.001G205000 ATEB1A-like microtubule associated protein, putative, expressed K10436: microtubule-associated protein, RP/EB family
13 Sobic.010G104400 cysteine-rich repeat secretory protein precursor, putative, expressed -
14 Sobic.006G134001 - -
15 Sobic.001G409700 RNA recognition motif containing protein, putative, expressed -
16 Sobic.002G184800 expressed protein -
17 Sobic.006G069500 glutaredoxin, putative, expressed -
18 Sobic.001G144700 LTPL71 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.009G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.009G078900 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic004G323100 Sobic004G323100 Sobic001G403200 Sobic001G403200 Sobic004G323100--Sobic001G403200 Sobic004G077100 Sobic004G077100 Sobic004G323100--Sobic004G077100 Sobic004G025200 Sobic004G025200 Sobic004G323100--Sobic004G025200 Sobic008G107600 Sobic008G107600 Sobic004G323100--Sobic008G107600 Sobic003G151900 Sobic003G151900 Sobic004G323100--Sobic003G151900 Sobic004G129700 Sobic004G129700 Sobic004G323100--Sobic004G129700 Sobic001G038400 Sobic001G038400 Sobic004G323100--Sobic001G038400 Sobic003G041700 Sobic003G041700 Sobic004G323100--Sobic003G041700 Sobic003G184500 Sobic003G184500 Sobic004G323100--Sobic003G184500 Sobic002G020500 Sobic002G020500 Sobic001G403200--Sobic002G020500 Sobic004G271500 Sobic004G271500 Sobic001G403200--Sobic004G271500 Sobic001G403200--Sobic003G041700 Sobic010G104400 Sobic010G104400 Sobic001G403200--Sobic010G104400 Sobic008G113800 Sobic008G113800 Sobic001G403200--Sobic008G113800 Sobic001G403200--Sobic003G151900 Sobic001G314000 Sobic001G314000 Sobic001G403200--Sobic001G314000 Sobic001G403200--Sobic001G038400 Sobic006G009500 Sobic006G009500 Sobic001G403200--Sobic006G009500 Sobic001G075400 Sobic001G075400 Sobic004G077100--Sobic001G075400 Sobic009G233500 Sobic009G233500 Sobic004G077100--Sobic009G233500 Sobic006G069500 Sobic006G069500 Sobic004G077100--Sobic006G069500 Sobic004G180400 Sobic004G180400 Sobic004G077100--Sobic004G180400 Sobic004G077100--Sobic003G041700 Sobic005G016300 Sobic005G016300 Sobic004G077100--Sobic005G016300 Sobic003G273800 Sobic003G273800 Sobic004G077100--Sobic003G273800 Sobic004G077100--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic004G077100--Sobic006G214000 Sobic010G030100 Sobic010G030100 Sobic004G025200--Sobic010G030100 Sobic002G420200 Sobic002G420200 Sobic004G025200--Sobic002G420200 Sobic009G165300 Sobic009G165300 Sobic004G025200--Sobic009G165300 Sobic008G037200 Sobic008G037200 Sobic004G025200--Sobic008G037200 Sobic004G025200--Sobic001G038400 Sobic006G134001 Sobic006G134001 Sobic004G025200--Sobic006G134001 Sobic001G216800 Sobic001G216800 Sobic004G025200--Sobic001G216800 Sobic006G000400 Sobic006G000400 Sobic004G025200--Sobic006G000400 Sobic003G283500 Sobic003G283500 Sobic004G025200--Sobic003G283500 Sobic008G107600--Sobic003G184500 Sobic008G107600--Sobic010G104400 Sobic009G078900 Sobic009G078900 Sobic008G107600--Sobic009G078900 Sobic001G399400 Sobic001G399400 Sobic008G107600--Sobic001G399400 Sobic008G137000 Sobic008G137000 Sobic008G107600--Sobic008G137000 Sobic008G107600--Sobic001G403200 Sobic008G107600--Sobic004G077100 Sobic002G184800 Sobic002G184800 Sobic008G107600--Sobic002G184800 Sobic008G107600--Sobic004G323100 Sobic001G514300 Sobic001G514300 Sobic003G151900--Sobic001G514300 Sobic005G231300 Sobic005G231300 Sobic003G151900--Sobic005G231300 Sobic008G135300 Sobic008G135300 Sobic003G151900--Sobic008G135300 Sobic008G099100 Sobic008G099100 Sobic003G151900--Sobic008G099100 Sobic003G151900--Sobic001G314000 Sobic006G119000 Sobic006G119000 Sobic003G151900--Sobic006G119000 Sobic008G077300 Sobic008G077300 Sobic003G151900--Sobic008G077300 Sobic006G201000 Sobic006G201000 Sobic003G151900--Sobic006G201000 Sobic007G154200 Sobic007G154200 Sobic003G151900--Sobic007G154200 Sobic002G359800 Sobic002G359800 Sobic004G129700--Sobic002G359800 Sobic004G129700--Sobic002G184800 Sobic004G129700--Sobic001G038400 Sobic004G129700--Sobic009G165300 Sobic010G260600 Sobic010G260600 Sobic004G129700--Sobic010G260600 Sobic004G129700--Sobic004G323100 Sobic001G430000 Sobic001G430000 Sobic004G129700--Sobic001G430000 Sobic010G036200 Sobic010G036200 Sobic004G129700--Sobic010G036200 Sobic004G097800 Sobic004G097800 Sobic004G129700--Sobic004G097800 Sobic001G038400--Sobic010G260600 Sobic001G038400--Sobic002G184800 Sobic001G038400--Sobic002G359800 Sobic001G038400--Sobic008G037200 Sobic001G038400--Sobic009G165300 Sobic001G038400--Sobic001G430000 Sobic001G413700 Sobic001G413700 Sobic001G038400--Sobic001G413700 Sobic005G116300 Sobic005G116300 Sobic001G038400--Sobic005G116300 Sobic001G038400--Sobic004G025200 Sobic003G041700--Sobic004G077100 Sobic003G387600 Sobic003G387600 Sobic003G041700--Sobic003G387600 Sobic003G041700--Sobic001G403200 Sobic003G041700--Sobic006G214000 Sobic003G041700--Sobic001G075400 Sobic003G041700--Sobic008G113800 Sobic003G041700--Sobic010G104400 Sobic003G041700--Sobic003G273800 Sobic001G131300 Sobic001G131300 Sobic003G041700--Sobic001G131300 Sobic003G184500--Sobic001G430000 Sobic003G184500--Sobic001G399400 Sobic003G184500--Sobic008G107600 Sobic006G271100 Sobic006G271100 Sobic003G184500--Sobic006G271100 Sobic003G184500--Sobic002G359800 Sobic003G184500--Sobic002G184800 Sobic003G399400 Sobic003G399400 Sobic003G184500--Sobic003G399400 Sobic002G219500 Sobic002G219500 Sobic003G184500--Sobic002G219500 Sobic003G023666 Sobic003G023666 Sobic003G184500--Sobic003G023666
Octagon: transcription factors


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