Gene annotation
Transcriptome id Sobic.001G443000.2,Sobic.001G443000.1
Synonym SGR5, ATIDD15
Functional annotation ZOS3-06 - C2H2 zinc finger protein, expressed
UniProt A0A1Z5SAJ8 , A0A1B6QPH6
Pfam -
Panther DB PTHR34946 PTHR34946:SF2 PTHR10593 PTHR10593:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01940 : C2H2-like zinc finger protein
RAP-DB (Rice) LOC_Os03g13400.1 : ZOS3-06 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a001483 , Zm00025a010195 , Zm00025a005392 , Zm00025a052944 , Zm00025a014047 , Zm00025a047221
Brachypodium KQJ90469 , KQK22673 , PNT68258 , PNT68255 , PNT68257 , KQJ98590 , KQJ90470
Barley HORVU4Hr1G064740.6 , HORVU4Hr1G064740.5 , HORVU4Hr1G064740.3 , HORVU4Hr1G064740.2 , HORVU4Hr1G064740.4
Wheat TraesCS5B02G232200 , TraesCS2D02G400300 , TraesCS4B02G230800 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS4D02G232000 , TraesCS5A02G233700 , TraesCS5D02G240600 , TraesCS4A02G074700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G388900 biotin--protein ligase, putative, expressed K03801: lipoyl(octanoyl) transferase
2 Sobic.003G298800 expressed protein -
3 Sobic.003G283500 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
4 Sobic.003G213600 expressed protein -
5 Sobic.003G016800 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.007G114700 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
7 Sobic.003G022800 ribosomal protein L23 family protein, putative, expressed K02892: RP-L23, MRPL23, large subunit ribosomal protein L23
8 Sobic.003G341200 expressed protein -
9 Sobic.010G125400 chaperone protein dnaJ, putative, expressed -
10 Sobic.006G000400 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
11 Sobic.002G326000 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
12 Sobic.002G184800 expressed protein -
13 Sobic.004G300701 - -
14 Sobic.001G430000 basic helix-loop-helix, putative, expressed -
15 Sobic.002G359800 GRAS family transcription factor domain containing protein, expressed -
16 Sobic.003G023666 - -
17 Sobic.009G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G038400 expressed protein -
19 Sobic.004G025200 expressed protein -
20 Sobic.010G045200 expressed protein -


Gene co-expression network
sample Sobic001G443000 Sobic001G443000 Sobic001G388900 Sobic001G388900 Sobic001G443000--Sobic001G388900 Sobic003G298800 Sobic003G298800 Sobic001G443000--Sobic003G298800 Sobic003G283500 Sobic003G283500 Sobic001G443000--Sobic003G283500 Sobic003G213600 Sobic003G213600 Sobic001G443000--Sobic003G213600 Sobic003G016800 Sobic003G016800 Sobic001G443000--Sobic003G016800 Sobic007G114700 Sobic007G114700 Sobic001G443000--Sobic007G114700 Sobic003G022800 Sobic003G022800 Sobic001G443000--Sobic003G022800 Sobic003G341200 Sobic003G341200 Sobic001G443000--Sobic003G341200 Sobic010G125400 Sobic010G125400 Sobic001G443000--Sobic010G125400 Sobic001G388900--Sobic003G213600 Sobic001G251300 Sobic001G251300 Sobic001G388900--Sobic001G251300 Sobic003G337100 Sobic003G337100 Sobic001G388900--Sobic003G337100 Sobic002G326000 Sobic002G326000 Sobic001G388900--Sobic002G326000 Sobic010G158200 Sobic010G158200 Sobic001G388900--Sobic010G158200 Sobic009G064100 Sobic009G064100 Sobic001G388900--Sobic009G064100 Sobic007G223900 Sobic007G223900 Sobic001G388900--Sobic007G223900 Sobic006G075801 Sobic006G075801 Sobic001G388900--Sobic006G075801 Sobic001G388900--Sobic003G283500 Sobic002G362600 Sobic002G362600 Sobic003G298800--Sobic002G362600 Sobic001G131600 Sobic001G131600 Sobic003G298800--Sobic001G131600 Sobic001G205000 Sobic001G205000 Sobic003G298800--Sobic001G205000 Sobic001G110000 Sobic001G110000 Sobic003G298800--Sobic001G110000 Sobic009G178900 Sobic009G178900 Sobic003G298800--Sobic009G178900 Sobic003G057100 Sobic003G057100 Sobic003G298800--Sobic003G057100 Sobic002G246200 Sobic002G246200 Sobic003G298800--Sobic002G246200 Sobic009G042900 Sobic009G042900 Sobic003G298800--Sobic009G042900 Sobic001G100400 Sobic001G100400 Sobic003G298800--Sobic001G100400 Sobic003G283500--Sobic002G326000 Sobic004G300701 Sobic004G300701 Sobic003G283500--Sobic004G300701 Sobic004G025200 Sobic004G025200 Sobic003G283500--Sobic004G025200 Sobic004G342900 Sobic004G342900 Sobic003G283500--Sobic004G342900 Sobic009G165300 Sobic009G165300 Sobic003G283500--Sobic009G165300 Sobic005G016600 Sobic005G016600 Sobic003G283500--Sobic005G016600 Sobic002G420200 Sobic002G420200 Sobic003G283500--Sobic002G420200 Sobic006G134001 Sobic006G134001 Sobic003G283500--Sobic006G134001 Sobic003G283500--Sobic010G158200 Sobic010G045200 Sobic010G045200 Sobic003G213600--Sobic010G045200 Sobic003G213600--Sobic003G337100 Sobic003G213600--Sobic007G114700 Sobic003G213600--Sobic001G388900 Sobic010G258600 Sobic010G258600 Sobic003G213600--Sobic010G258600 Sobic003G198701 Sobic003G198701 Sobic003G213600--Sobic003G198701 Sobic009G167300 Sobic009G167300 Sobic003G213600--Sobic009G167300 Sobic009G244000 Sobic009G244000 Sobic003G213600--Sobic009G244000 Sobic003G213600--Sobic002G326000 Sobic003G023666 Sobic003G023666 Sobic003G016800--Sobic003G023666 Sobic008G037200 Sobic008G037200 Sobic003G016800--Sobic008G037200 Sobic002G045800 Sobic002G045800 Sobic003G016800--Sobic002G045800 Sobic001G430000 Sobic001G430000 Sobic003G016800--Sobic001G430000 Sobic003G016800--Sobic004G025200 Sobic006G166900 Sobic006G166900 Sobic003G016800--Sobic006G166900 Sobic001G038400 Sobic001G038400 Sobic003G016800--Sobic001G038400 Sobic007G224800 Sobic007G224800 Sobic003G016800--Sobic007G224800 Sobic002G359800 Sobic002G359800 Sobic003G016800--Sobic002G359800 Sobic007G114700--Sobic003G213600 Sobic010G145200 Sobic010G145200 Sobic007G114700--Sobic010G145200 Sobic001G511200 Sobic001G511200 Sobic007G114700--Sobic001G511200 Sobic007G114700--Sobic007G224800 Sobic003G201300 Sobic003G201300 Sobic007G114700--Sobic003G201300 Sobic005G087600 Sobic005G087600 Sobic007G114700--Sobic005G087600 Sobic007G114700--Sobic001G430000 Sobic003G423100 Sobic003G423100 Sobic007G114700--Sobic003G423100 Sobic007G114700--Sobic004G300701 Sobic007G169000 Sobic007G169000 Sobic003G022800--Sobic007G169000 Sobic003G022800--Sobic010G045200 Sobic004G356600 Sobic004G356600 Sobic003G022800--Sobic004G356600 Sobic007G085350 Sobic007G085350 Sobic003G022800--Sobic007G085350 Sobic008G086401 Sobic008G086401 Sobic003G022800--Sobic008G086401 Sobic003G022800--Sobic009G167300 Sobic003G022800--Sobic003G201300 Sobic009G116766 Sobic009G116766 Sobic003G022800--Sobic009G116766 Sobic003G022800--Sobic005G087600 Sobic009G006200 Sobic009G006200 Sobic003G341200--Sobic009G006200 Sobic003G341200--Sobic004G300701 Sobic003G341200--Sobic004G342900 Sobic003G347200 Sobic003G347200 Sobic003G341200--Sobic003G347200 Sobic002G350700 Sobic002G350700 Sobic003G341200--Sobic002G350700 Sobic006G266300 Sobic006G266300 Sobic003G341200--Sobic006G266300 Sobic002G050400 Sobic002G050400 Sobic003G341200--Sobic002G050400 Sobic003G341200--Sobic010G158200 Sobic002G318501 Sobic002G318501 Sobic003G341200--Sobic002G318501 Sobic010G125400--Sobic010G158200 Sobic010G125400--Sobic002G326000 Sobic002G253000 Sobic002G253000 Sobic010G125400--Sobic002G253000 Sobic010G125400--Sobic002G318501 Sobic010G125400--Sobic006G075801 Sobic010G125400--Sobic001G251300 Sobic010G125400--Sobic009G064100 Sobic001G161601 Sobic001G161601 Sobic010G125400--Sobic001G161601 Sobic002G171600 Sobic002G171600 Sobic010G125400--Sobic002G171600
Octagon: transcription factors


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