Gene annotation
Transcriptome id Sobic.003G298800.5,Sobic.003G298800.9,Sobic.003G298800.11,Sobic.003G298800.12,Sobic.003G298800.8,Sobic.003G298800.6,Sobic.003G298800.10,Sobic.003G298800.2,Sobic.003G298800.4,Sobic.003G298800.7,Sobic.003G298800.13,Sobic.003G298800.3,Sobic.003G298800.1
Synonym Sb03g034870, NFD6
Functional annotation expressed protein
UniProt A0A1W0VZM3 , A0A1W0VZK0 , A0A1W0VZK6 , C5XK65
Pfam -
Panther DB PTHR33156 PTHR33156:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G20585 : nuclear fusion defective 6
RAP-DB (Rice) LOC_Os01g55020.4,LOC_Os01g55020.2,LOC_Os01g55020.1,LOC_Os01g55020.5 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G362600 expressed protein -
2 Sobic.001G131600 expressed protein -
3 Sobic.001G205000 ATEB1A-like microtubule associated protein, putative, expressed K10436: microtubule-associated protein, RP/EB family
4 Sobic.001G110000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
5 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
6 Sobic.003G057100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
7 Sobic.002G246200 expressed protein -
8 Sobic.009G042900 expressed protein K17411: small subunit ribosomal protein S33
9 Sobic.001G100400 ribosomal protein L7/L12 C-terminal domain containing protein, expressed K02935: RP-L7, MRPL12, large subunit ribosomal protein L7/L12
10 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
11 Sobic.002G329900 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
12 Sobic.001G443000 ZOS3-06 - C2H2 zinc finger protein, expressed -
13 Sobic.002G124900 expressed protein K02138: ATPeF0D, ATP5H, F-type H+-transporting ATPase subunit d
14 Sobic.001G162800 expressed protein -
15 Sobic.001G347901 - -
16 Sobic.006G000400 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
17 Sobic.007G114700 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
18 Sobic.002G074200 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
19 Sobic.001G146000 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
20 Sobic.008G113800 expressed protein -


Gene co-expression network
sample Sobic003G298800 Sobic003G298800 Sobic002G362600 Sobic002G362600 Sobic003G298800--Sobic002G362600 Sobic001G131600 Sobic001G131600 Sobic003G298800--Sobic001G131600 Sobic001G205000 Sobic001G205000 Sobic003G298800--Sobic001G205000 Sobic001G110000 Sobic001G110000 Sobic003G298800--Sobic001G110000 Sobic009G178900 Sobic009G178900 Sobic003G298800--Sobic009G178900 Sobic003G057100 Sobic003G057100 Sobic003G298800--Sobic003G057100 Sobic002G246200 Sobic002G246200 Sobic003G298800--Sobic002G246200 Sobic009G042900 Sobic009G042900 Sobic003G298800--Sobic009G042900 Sobic001G100400 Sobic001G100400 Sobic003G298800--Sobic001G100400 Sobic006G179200 Sobic006G179200 Sobic002G362600--Sobic006G179200 Sobic003G273800 Sobic003G273800 Sobic002G362600--Sobic003G273800 Sobic010G260800 Sobic010G260800 Sobic002G362600--Sobic010G260800 Sobic006G240300 Sobic006G240300 Sobic002G362600--Sobic006G240300 Sobic001G175000 Sobic001G175000 Sobic002G362600--Sobic001G175000 Sobic002G297500 Sobic002G297500 Sobic002G362600--Sobic002G297500 Sobic004G053900 Sobic004G053900 Sobic002G362600--Sobic004G053900 Sobic004G117300 Sobic004G117300 Sobic002G362600--Sobic004G117300 Sobic008G129200 Sobic008G129200 Sobic002G362600--Sobic008G129200 Sobic009G189200 Sobic009G189200 Sobic001G131600--Sobic009G189200 Sobic002G350400 Sobic002G350400 Sobic001G131600--Sobic002G350400 Sobic003G122200 Sobic003G122200 Sobic001G131600--Sobic003G122200 Sobic006G102900 Sobic006G102900 Sobic001G131600--Sobic006G102900 Sobic005G047100 Sobic005G047100 Sobic001G131600--Sobic005G047100 Sobic004G285900 Sobic004G285900 Sobic001G131600--Sobic004G285900 Sobic003G135400 Sobic003G135400 Sobic001G131600--Sobic003G135400 Sobic002G111500 Sobic002G111500 Sobic001G131600--Sobic002G111500 Sobic003G364900 Sobic003G364900 Sobic001G131600--Sobic003G364900 Sobic004G279601 Sobic004G279601 Sobic001G205000--Sobic004G279601 Sobic007G207700 Sobic007G207700 Sobic001G205000--Sobic007G207700 Sobic003G328500 Sobic003G328500 Sobic001G205000--Sobic003G328500 Sobic001G205000--Sobic004G285900 Sobic006G134200 Sobic006G134200 Sobic001G205000--Sobic006G134200 Sobic001G205000--Sobic003G057100 Sobic005G016300 Sobic005G016300 Sobic001G205000--Sobic005G016300 Sobic001G078600 Sobic001G078600 Sobic001G205000--Sobic001G078600 Sobic006G076400 Sobic006G076400 Sobic001G205000--Sobic006G076400 Sobic002G329900 Sobic002G329900 Sobic001G110000--Sobic002G329900 Sobic004G055100 Sobic004G055100 Sobic001G110000--Sobic004G055100 Sobic001G404800 Sobic001G404800 Sobic001G110000--Sobic001G404800 Sobic001G110000--Sobic002G246200 Sobic003G160700 Sobic003G160700 Sobic001G110000--Sobic003G160700 Sobic003G215700 Sobic003G215700 Sobic001G110000--Sobic003G215700 Sobic003G209000 Sobic003G209000 Sobic001G110000--Sobic003G209000 Sobic002G418400 Sobic002G418400 Sobic001G110000--Sobic002G418400 Sobic001G047800 Sobic001G047800 Sobic001G110000--Sobic001G047800 Sobic001G511200 Sobic001G511200 Sobic009G178900--Sobic001G511200 Sobic006G069500 Sobic006G069500 Sobic009G178900--Sobic006G069500 Sobic009G178900--Sobic003G273800 Sobic004G180400 Sobic004G180400 Sobic009G178900--Sobic004G180400 Sobic003G364700 Sobic003G364700 Sobic009G178900--Sobic003G364700 Sobic009G233600 Sobic009G233600 Sobic009G178900--Sobic009G233600 Sobic004G077100 Sobic004G077100 Sobic009G178900--Sobic004G077100 Sobic009G178900--Sobic005G016300 Sobic006G271100 Sobic006G271100 Sobic009G178900--Sobic006G271100 Sobic002G276000 Sobic002G276000 Sobic003G057100--Sobic002G276000 Sobic001G054800 Sobic001G054800 Sobic003G057100--Sobic001G054800 Sobic001G529400 Sobic001G529400 Sobic003G057100--Sobic001G529400 Sobic003G347900 Sobic003G347900 Sobic003G057100--Sobic003G347900 Sobic002G291066 Sobic002G291066 Sobic003G057100--Sobic002G291066 Sobic010G047100 Sobic010G047100 Sobic003G057100--Sobic010G047100 Sobic001G009700 Sobic001G009700 Sobic003G057100--Sobic001G009700 Sobic006G191800 Sobic006G191800 Sobic003G057100--Sobic006G191800 Sobic004G170500 Sobic004G170500 Sobic003G057100--Sobic004G170500 Sobic007G211500 Sobic007G211500 Sobic002G246200--Sobic007G211500 Sobic002G246200--Sobic001G110000 Sobic002G078300 Sobic002G078300 Sobic002G246200--Sobic002G078300 Sobic004G260200 Sobic004G260200 Sobic002G246200--Sobic004G260200 Sobic002G263100 Sobic002G263100 Sobic002G246200--Sobic002G263100 Sobic001G286200 Sobic001G286200 Sobic002G246200--Sobic001G286200 Sobic002G246200--Sobic001G404800 Sobic002G246200--Sobic001G047800 Sobic009G206700 Sobic009G206700 Sobic002G246200--Sobic009G206700 Sobic001G304400 Sobic001G304400 Sobic009G042900--Sobic001G304400 Sobic009G042900--Sobic001G286200 Sobic001G510800 Sobic001G510800 Sobic009G042900--Sobic001G510800 Sobic009G042900--Sobic002G078300 Sobic010G264300 Sobic010G264300 Sobic009G042900--Sobic010G264300 Sobic006G035900 Sobic006G035900 Sobic009G042900--Sobic006G035900 Sobic001G058900 Sobic001G058900 Sobic009G042900--Sobic001G058900 Sobic006G057200 Sobic006G057200 Sobic009G042900--Sobic006G057200 Sobic002G304900 Sobic002G304900 Sobic009G042900--Sobic002G304900 Sobic003G296800 Sobic003G296800 Sobic001G100400--Sobic003G296800 Sobic001G031800 Sobic001G031800 Sobic001G100400--Sobic001G031800 Sobic001G100400--Sobic002G246200 Sobic002G136700 Sobic002G136700 Sobic001G100400--Sobic002G136700 Sobic001G100400--Sobic001G110000 Sobic006G262300 Sobic006G262300 Sobic001G100400--Sobic006G262300 Sobic001G100400--Sobic002G263100 Sobic002G135200 Sobic002G135200 Sobic001G100400--Sobic002G135200 Sobic001G077000 Sobic001G077000 Sobic001G100400--Sobic001G077000
Octagon: transcription factors


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