Gene annotation
Transcriptome id Sobic.001G131600.1
Synonym Sb01g011530
Functional annotation expressed protein
UniProt C5WPI1
Pfam PF14705
Panther DB PTHR22739
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33640 : -
RAP-DB (Rice) LOC_Os03g48390.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS4A02G282700
Populus -


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cDNA sequences
Sobic.001G131600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
2 Sobic.002G350400 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
3 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
4 Sobic.006G102900 expressed protein -
5 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote
6 Sobic.004G285900 HMG1/2, putative, expressed -
7 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
8 Sobic.002G111500 Fatty acyl-ACP thioesterases B FATB (At)(PubMedID : 27208977)@myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
9 Sobic.003G364900 hemerythrin family protein, expressed -
10 Sobic.010G176900 expressed protein -
11 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
12 Sobic.001G344500 sucrose synthase(PubMedID : 26616172)@sucrose synthase, putative, expressed K00695: sucrose synthase
13 Sobic.003G444200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
14 Sobic.001G261549 - -
15 Sobic.001G205000 ATEB1A-like microtubule associated protein, putative, expressed K10436: microtubule-associated protein, RP/EB family
16 Sobic.001G146000 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
17 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
18 Sobic.006G278100 expressed protein -
19 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
20 Sobic.001G521300 expressed protein -


Gene co-expression network
sample Sobic001G131600 Sobic001G131600 Sobic009G189200 Sobic009G189200 Sobic001G131600--Sobic009G189200 Sobic002G350400 Sobic002G350400 Sobic001G131600--Sobic002G350400 Sobic003G122200 Sobic003G122200 Sobic001G131600--Sobic003G122200 Sobic006G102900 Sobic006G102900 Sobic001G131600--Sobic006G102900 Sobic005G047100 Sobic005G047100 Sobic001G131600--Sobic005G047100 Sobic004G285900 Sobic004G285900 Sobic001G131600--Sobic004G285900 Sobic003G135400 Sobic003G135400 Sobic001G131600--Sobic003G135400 Sobic002G111500 Sobic002G111500 Sobic001G131600--Sobic002G111500 Sobic003G364900 Sobic003G364900 Sobic001G131600--Sobic003G364900 Sobic009G189200--Sobic006G102900 Sobic001G261549 Sobic001G261549 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic007G044400 Sobic007G044400 Sobic009G189200--Sobic007G044400 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic009G189200--Sobic003G122200 Sobic009G189200--Sobic001G131600 Sobic001G038300 Sobic001G038300 Sobic002G350400--Sobic001G038300 Sobic001G107200 Sobic001G107200 Sobic002G350400--Sobic001G107200 Sobic003G250700 Sobic003G250700 Sobic002G350400--Sobic003G250700 Sobic002G350400--Sobic003G122200 Sobic001G475500 Sobic001G475500 Sobic002G350400--Sobic001G475500 Sobic002G350400--Sobic005G047100 Sobic001G107100 Sobic001G107100 Sobic002G350400--Sobic001G107100 Sobic002G350400--Sobic001G131600 Sobic002G396400 Sobic002G396400 Sobic002G350400--Sobic002G396400 Sobic003G122200--Sobic001G475500 Sobic001G418100 Sobic001G418100 Sobic003G122200--Sobic001G418100 Sobic007G150800 Sobic007G150800 Sobic003G122200--Sobic007G150800 Sobic005G112800 Sobic005G112800 Sobic003G122200--Sobic005G112800 Sobic003G034600 Sobic003G034600 Sobic003G122200--Sobic003G034600 Sobic010G264300 Sobic010G264300 Sobic003G122200--Sobic010G264300 Sobic003G122200--Sobic001G038300 Sobic004G055700 Sobic004G055700 Sobic003G122200--Sobic004G055700 Sobic001G040100 Sobic001G040100 Sobic003G122200--Sobic001G040100 Sobic001G078600 Sobic001G078600 Sobic006G102900--Sobic001G078600 Sobic003G107200 Sobic003G107200 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic006G102900--Sobic001G261549 Sobic007G154500 Sobic007G154500 Sobic006G102900--Sobic007G154500 Sobic002G426800 Sobic002G426800 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic004G047100 Sobic004G047100 Sobic006G102900--Sobic004G047100 Sobic006G102900--Sobic009G189200 Sobic004G297950 Sobic004G297950 Sobic005G047100--Sobic004G297950 Sobic003G247600 Sobic003G247600 Sobic005G047100--Sobic003G247600 Sobic007G225400 Sobic007G225400 Sobic005G047100--Sobic007G225400 Sobic004G170900 Sobic004G170900 Sobic005G047100--Sobic004G170900 Sobic001G521300 Sobic001G521300 Sobic005G047100--Sobic001G521300 Sobic003G321400 Sobic003G321400 Sobic005G047100--Sobic003G321400 Sobic004G170800 Sobic004G170800 Sobic005G047100--Sobic004G170800 Sobic005G047100--Sobic003G135400 Sobic003G420100 Sobic003G420100 Sobic005G047100--Sobic003G420100 Sobic004G285900--Sobic001G078600 Sobic004G285900--Sobic001G261549 Sobic004G279601 Sobic004G279601 Sobic004G285900--Sobic004G279601 Sobic007G214700 Sobic007G214700 Sobic004G285900--Sobic007G214700 Sobic004G285900--Sobic006G102900 Sobic002G162300 Sobic002G162300 Sobic004G285900--Sobic002G162300 Sobic004G285900--Sobic007G154500 Sobic004G285900--Sobic009G189200 Sobic001G205000 Sobic001G205000 Sobic004G285900--Sobic001G205000 Sobic003G410600 Sobic003G410600 Sobic003G135400--Sobic003G410600 Sobic003G135400--Sobic001G078600 Sobic003G294500 Sobic003G294500 Sobic003G135400--Sobic003G294500 Sobic004G197400 Sobic004G197400 Sobic003G135400--Sobic004G197400 Sobic008G141200 Sobic008G141200 Sobic003G135400--Sobic008G141200 Sobic005G144600 Sobic005G144600 Sobic003G135400--Sobic005G144600 Sobic007G219400 Sobic007G219400 Sobic003G135400--Sobic007G219400 Sobic001G103000 Sobic001G103000 Sobic003G135400--Sobic001G103000 Sobic003G135400--Sobic005G047100 Sobic003G266400 Sobic003G266400 Sobic002G111500--Sobic003G266400 Sobic004G232700 Sobic004G232700 Sobic002G111500--Sobic004G232700 Sobic002G111500--Sobic003G122200 Sobic010G018500 Sobic010G018500 Sobic002G111500--Sobic010G018500 Sobic010G114000 Sobic010G114000 Sobic002G111500--Sobic010G114000 Sobic002G271300 Sobic002G271300 Sobic002G111500--Sobic002G271300 Sobic003G444200 Sobic003G444200 Sobic002G111500--Sobic003G444200 Sobic010G101600 Sobic010G101600 Sobic002G111500--Sobic010G101600 Sobic001G543400 Sobic001G543400 Sobic002G111500--Sobic001G543400 Sobic003G364900--Sobic003G266400 Sobic006G236800 Sobic006G236800 Sobic003G364900--Sobic006G236800 Sobic003G105500 Sobic003G105500 Sobic003G364900--Sobic003G105500 Sobic003G364900--Sobic010G018500 Sobic010G051100 Sobic010G051100 Sobic003G364900--Sobic010G051100 Sobic002G232400 Sobic002G232400 Sobic003G364900--Sobic002G232400 Sobic002G090500 Sobic002G090500 Sobic003G364900--Sobic002G090500 Sobic010G042600 Sobic010G042600 Sobic003G364900--Sobic010G042600 Sobic003G364900--Sobic001G131600
Octagon: transcription factors


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