Gene annotation
Transcriptome id Sobic.001G521300.1
Synonym Sb01g048610
Functional annotation expressed protein
UniProt C5WZZ3
Pfam -
Panther DB PTHR36355
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42110 : -
RAP-DB (Rice) LOC_Os03g03630.1 : expressed protein
MaizeGDB (Corn) Zm00025a000379
Brachypodium KQK23864
Barley HORVU4Hr1G082900.1 , HORVU4Hr1G082900.2
Wheat TraesCS4B02G321400 , TraesCS4D02G318000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
2 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote
3 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
5 Sobic.003G250700 fasciclin domain containing protein, expressed -
6 Sobic.001G261460 - -
7 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.001G156500 AGC_PVPK_like_kin82y.9 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
9 Sobic.006G119000 X8 domain containing protein, expressed -
10 Sobic.003G307400 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
11 Sobic.003G115200 expressed protein -
12 Sobic.001G099600 ankyrin repeat family protein, putative, expressed -
13 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
14 Sobic.005G088300 expressed protein -
15 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
16 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
17 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
18 Sobic.003G000200 AWPM-19-like membrane family protein, putative, expressed -
19 Sobic.004G050700 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.001G528600 remorin family protein, putative, expressed -


Gene co-expression network
sample Sobic001G521300 Sobic001G521300 Sobic010G047600 Sobic010G047600 Sobic001G521300--Sobic010G047600 Sobic005G047100 Sobic005G047100 Sobic001G521300--Sobic005G047100 Sobic003G321400 Sobic003G321400 Sobic001G521300--Sobic003G321400 Sobic003G269100 Sobic003G269100 Sobic001G521300--Sobic003G269100 Sobic003G250700 Sobic003G250700 Sobic001G521300--Sobic003G250700 Sobic001G261460 Sobic001G261460 Sobic001G521300--Sobic001G261460 Sobic001G046800 Sobic001G046800 Sobic001G521300--Sobic001G046800 Sobic001G156500 Sobic001G156500 Sobic001G521300--Sobic001G156500 Sobic006G119000 Sobic006G119000 Sobic001G521300--Sobic006G119000 Sobic010G047600--Sobic001G261460 Sobic010G047600--Sobic001G046800 Sobic010G047600--Sobic003G321400 Sobic009G221800 Sobic009G221800 Sobic010G047600--Sobic009G221800 Sobic001G514200 Sobic001G514200 Sobic010G047600--Sobic001G514200 Sobic003G078900 Sobic003G078900 Sobic010G047600--Sobic003G078900 Sobic003G000200 Sobic003G000200 Sobic010G047600--Sobic003G000200 Sobic003G115200 Sobic003G115200 Sobic010G047600--Sobic003G115200 Sobic004G050700 Sobic004G050700 Sobic010G047600--Sobic004G050700 Sobic004G297950 Sobic004G297950 Sobic005G047100--Sobic004G297950 Sobic003G247600 Sobic003G247600 Sobic005G047100--Sobic003G247600 Sobic007G225400 Sobic007G225400 Sobic005G047100--Sobic007G225400 Sobic004G170900 Sobic004G170900 Sobic005G047100--Sobic004G170900 Sobic005G047100--Sobic001G521300 Sobic005G047100--Sobic003G321400 Sobic004G170800 Sobic004G170800 Sobic005G047100--Sobic004G170800 Sobic003G135400 Sobic003G135400 Sobic005G047100--Sobic003G135400 Sobic003G420100 Sobic003G420100 Sobic005G047100--Sobic003G420100 Sobic003G321400--Sobic003G269100 Sobic003G321400--Sobic003G115200 Sobic003G321400--Sobic009G221800 Sobic003G321400--Sobic010G047600 Sobic003G321400--Sobic003G000200 Sobic003G321400--Sobic003G078900 Sobic003G321400--Sobic001G261460 Sobic001G264400 Sobic001G264400 Sobic003G321400--Sobic001G264400 Sobic001G099600 Sobic001G099600 Sobic003G321400--Sobic001G099600 Sobic003G269100--Sobic003G321400 Sobic003G269100--Sobic001G099600 Sobic003G269100--Sobic004G297950 Sobic003G269100--Sobic003G115200 Sobic003G269100--Sobic010G047600 Sobic003G269100--Sobic001G261460 Sobic003G269100--Sobic001G264400 Sobic001G484000 Sobic001G484000 Sobic003G269100--Sobic001G484000 Sobic003G269100--Sobic001G046800 Sobic001G107100 Sobic001G107100 Sobic003G250700--Sobic001G107100 Sobic001G038300 Sobic001G038300 Sobic003G250700--Sobic001G038300 Sobic003G250700--Sobic001G046800 Sobic003G250700--Sobic003G000200 Sobic003G250700--Sobic010G047600 Sobic003G250700--Sobic003G321400 Sobic010G014400 Sobic010G014400 Sobic003G250700--Sobic010G014400 Sobic003G250700--Sobic004G170800 Sobic003G250700--Sobic001G156500 Sobic001G261460--Sobic010G047600 Sobic001G261460--Sobic001G514200 Sobic001G261460--Sobic001G046800 Sobic001G261460--Sobic009G221800 Sobic001G261460--Sobic003G000200 Sobic001G261460--Sobic003G321400 Sobic005G061200 Sobic005G061200 Sobic001G261460--Sobic005G061200 Sobic001G261460--Sobic003G115200 Sobic001G261460--Sobic010G014400 Sobic001G046800--Sobic010G047600 Sobic001G046800--Sobic001G261460 Sobic010G106700 Sobic010G106700 Sobic001G046800--Sobic010G106700 Sobic002G053900 Sobic002G053900 Sobic001G046800--Sobic002G053900 Sobic009G008800 Sobic009G008800 Sobic001G046800--Sobic009G008800 Sobic001G046800--Sobic001G484000 Sobic001G046800--Sobic010G014400 Sobic001G046800--Sobic003G321400 Sobic001G046800--Sobic003G250700 Sobic001G156500--Sobic003G250700 Sobic001G156500--Sobic010G047600 Sobic001G156500--Sobic003G115200 Sobic001G156500--Sobic003G000200 Sobic001G156500--Sobic001G261460 Sobic008G055100 Sobic008G055100 Sobic001G156500--Sobic008G055100 Sobic001G156500--Sobic010G014400 Sobic003G121000 Sobic003G121000 Sobic001G156500--Sobic003G121000 Sobic009G232100 Sobic009G232100 Sobic001G156500--Sobic009G232100 Sobic006G030200 Sobic006G030200 Sobic006G119000--Sobic006G030200 Sobic001G295000 Sobic001G295000 Sobic006G119000--Sobic001G295000 Sobic003G307400 Sobic003G307400 Sobic006G119000--Sobic003G307400 Sobic006G119000--Sobic003G121000 Sobic001G314000 Sobic001G314000 Sobic006G119000--Sobic001G314000 Sobic003G236600 Sobic003G236600 Sobic006G119000--Sobic003G236600 Sobic001G245800 Sobic001G245800 Sobic006G119000--Sobic001G245800 Sobic001G514300 Sobic001G514300 Sobic006G119000--Sobic001G514300 Sobic008G135300 Sobic008G135300 Sobic006G119000--Sobic008G135300
Octagon: transcription factors


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