Gene annotation
Transcriptome id Sobic.010G176900.4,Sobic.010G176900.1,Sobic.010G176900.2,Sobic.010G176900.3
Synonym Sb10g022880
Functional annotation expressed protein
UniProt C5Z566 , A0A1W0VTP1 , A0A1W0VTQ9
Pfam -
Panther DB PTHR34468 PTHR34468:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G62550 : -
RAP-DB (Rice) LOC_Os06g38960.2 : expressed protein
MaizeGDB (Corn) Zm00025a051272 , Zm00025a042273
Brachypodium KQK17862
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G176900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
2 Sobic.001G131600 expressed protein -
3 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
4 Sobic.002G350400 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
5 Sobic.004G279601 - K11254: histone H4
6 Sobic.003G074900 expressed protein -
7 Sobic.004G183200 expressed protein -
8 Sobic.003G266400 clathrin assembly protein, putative, expressed -
9 Sobic.003G444200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
10 Sobic.001G146000 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
11 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
12 Sobic.004G285900 HMG1/2, putative, expressed -
13 Sobic.001G347901 - -
14 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
15 Sobic.002G111500 Fatty acyl-ACP thioesterases B FATB (At)(PubMedID : 27208977)@myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
16 Sobic.006G102900 expressed protein -
17 Sobic.010G238100 plant-specific domain TIGR01627 family protein, expressed -
18 Sobic.002G329900 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
19 Sobic.002G308300 expressed protein -
20 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein


Gene co-expression network
sample Sobic010G176900 Sobic010G176900 Sobic003G122200 Sobic003G122200 Sobic010G176900--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic010G176900--Sobic001G131600 Sobic009G189200 Sobic009G189200 Sobic010G176900--Sobic009G189200 Sobic002G350400 Sobic002G350400 Sobic010G176900--Sobic002G350400 Sobic004G279601 Sobic004G279601 Sobic010G176900--Sobic004G279601 Sobic003G074900 Sobic003G074900 Sobic010G176900--Sobic003G074900 Sobic004G183200 Sobic004G183200 Sobic010G176900--Sobic004G183200 Sobic003G266400 Sobic003G266400 Sobic010G176900--Sobic003G266400 Sobic003G444200 Sobic003G444200 Sobic010G176900--Sobic003G444200 Sobic001G475500 Sobic001G475500 Sobic003G122200--Sobic001G475500 Sobic001G418100 Sobic001G418100 Sobic003G122200--Sobic001G418100 Sobic007G150800 Sobic007G150800 Sobic003G122200--Sobic007G150800 Sobic005G112800 Sobic005G112800 Sobic003G122200--Sobic005G112800 Sobic003G034600 Sobic003G034600 Sobic003G122200--Sobic003G034600 Sobic010G264300 Sobic010G264300 Sobic003G122200--Sobic010G264300 Sobic001G038300 Sobic001G038300 Sobic003G122200--Sobic001G038300 Sobic004G055700 Sobic004G055700 Sobic003G122200--Sobic004G055700 Sobic001G040100 Sobic001G040100 Sobic003G122200--Sobic001G040100 Sobic001G131600--Sobic009G189200 Sobic001G131600--Sobic002G350400 Sobic001G131600--Sobic003G122200 Sobic006G102900 Sobic006G102900 Sobic001G131600--Sobic006G102900 Sobic005G047100 Sobic005G047100 Sobic001G131600--Sobic005G047100 Sobic004G285900 Sobic004G285900 Sobic001G131600--Sobic004G285900 Sobic003G135400 Sobic003G135400 Sobic001G131600--Sobic003G135400 Sobic002G111500 Sobic002G111500 Sobic001G131600--Sobic002G111500 Sobic003G364900 Sobic003G364900 Sobic001G131600--Sobic003G364900 Sobic009G189200--Sobic006G102900 Sobic001G261549 Sobic001G261549 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic007G044400 Sobic007G044400 Sobic009G189200--Sobic007G044400 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic009G189200--Sobic003G122200 Sobic009G189200--Sobic001G131600 Sobic002G350400--Sobic001G038300 Sobic001G107200 Sobic001G107200 Sobic002G350400--Sobic001G107200 Sobic003G250700 Sobic003G250700 Sobic002G350400--Sobic003G250700 Sobic002G350400--Sobic003G122200 Sobic002G350400--Sobic001G475500 Sobic002G350400--Sobic005G047100 Sobic001G107100 Sobic001G107100 Sobic002G350400--Sobic001G107100 Sobic002G350400--Sobic001G131600 Sobic002G396400 Sobic002G396400 Sobic002G350400--Sobic002G396400 Sobic001G205000 Sobic001G205000 Sobic004G279601--Sobic001G205000 Sobic006G076400 Sobic006G076400 Sobic004G279601--Sobic006G076400 Sobic004G279601--Sobic004G285900 Sobic001G078600 Sobic001G078600 Sobic004G279601--Sobic001G078600 Sobic006G081800 Sobic006G081800 Sobic004G279601--Sobic006G081800 Sobic004G205300 Sobic004G205300 Sobic004G279601--Sobic004G205300 Sobic007G214700 Sobic007G214700 Sobic004G279601--Sobic007G214700 Sobic003G057100 Sobic003G057100 Sobic004G279601--Sobic003G057100 Sobic004G279601--Sobic001G261549 Sobic008G136800 Sobic008G136800 Sobic003G074900--Sobic008G136800 Sobic006G124300 Sobic006G124300 Sobic003G074900--Sobic006G124300 Sobic006G203900 Sobic006G203900 Sobic003G074900--Sobic006G203900 Sobic002G387800 Sobic002G387800 Sobic003G074900--Sobic002G387800 Sobic009G211900 Sobic009G211900 Sobic003G074900--Sobic009G211900 Sobic003G016300 Sobic003G016300 Sobic003G074900--Sobic003G016300 Sobic001G219800 Sobic001G219800 Sobic003G074900--Sobic001G219800 Sobic007G141100 Sobic007G141100 Sobic003G074900--Sobic007G141100 Sobic009G001900 Sobic009G001900 Sobic003G074900--Sobic009G001900 Sobic003G296800 Sobic003G296800 Sobic004G183200--Sobic003G296800 Sobic001G519000 Sobic001G519000 Sobic004G183200--Sobic001G519000 Sobic010G059300 Sobic010G059300 Sobic004G183200--Sobic010G059300 Sobic007G211500 Sobic007G211500 Sobic004G183200--Sobic007G211500 Sobic002G263100 Sobic002G263100 Sobic004G183200--Sobic002G263100 Sobic001G047800 Sobic001G047800 Sobic004G183200--Sobic001G047800 Sobic007G161700 Sobic007G161700 Sobic004G183200--Sobic007G161700 Sobic001G286200 Sobic001G286200 Sobic004G183200--Sobic001G286200 Sobic004G060500 Sobic004G060500 Sobic004G183200--Sobic004G060500 Sobic003G266400--Sobic003G364900 Sobic010G018500 Sobic010G018500 Sobic003G266400--Sobic010G018500 Sobic003G266400--Sobic002G111500 Sobic001G543400 Sobic001G543400 Sobic003G266400--Sobic001G543400 Sobic002G090500 Sobic002G090500 Sobic003G266400--Sobic002G090500 Sobic002G153000 Sobic002G153000 Sobic003G266400--Sobic002G153000 Sobic002G232400 Sobic002G232400 Sobic003G266400--Sobic002G232400 Sobic010G042600 Sobic010G042600 Sobic003G266400--Sobic010G042600 Sobic001G146000 Sobic001G146000 Sobic003G266400--Sobic001G146000 Sobic003G444200--Sobic006G102900 Sobic001G401600 Sobic001G401600 Sobic003G444200--Sobic001G401600 Sobic003G444200--Sobic009G189200 Sobic010G101600 Sobic010G101600 Sobic003G444200--Sobic010G101600 Sobic010G089500 Sobic010G089500 Sobic003G444200--Sobic010G089500 Sobic003G444200--Sobic002G232400 Sobic002G271300 Sobic002G271300 Sobic003G444200--Sobic002G271300 Sobic008G084100 Sobic008G084100 Sobic003G444200--Sobic008G084100 Sobic003G444200--Sobic002G111500
Octagon: transcription factors


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