Gene annotation
Transcriptome id Sobic.010G238100.1
Synonym Sb10g027930
Functional annotation plant-specific domain TIGR01627 family protein, expressed
UniProt C5Z8C3
Pfam PF04669
Panther DB PTHR31444 PTHR31444:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67210 : Protein of unknown function (DUF579)
RAP-DB (Rice) LOC_Os06g47310.1 : plant-specific domain TIGR01627 family protein, expressed
MaizeGDB (Corn) Zm00025a019022 , Zm00025a018210
Brachypodium KQJ93417 , KQK17257
Barley HORVU0Hr1G015370.1 , HORVU7Hr1G100750.2 , HORVU7Hr1G100750.3 , HORVU7Hr1G100750.1 , HORVU7Hr1G100750.4
Wheat TraesCS7A02G443100 , TraesCS7D02G432300 , TraesCS7B02G341900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G533000 expressed protein -
2 Sobic.001G054800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
3 Sobic.002G291066 - K11254: histone H4
4 Sobic.003G338966 - -
5 Sobic.001G096900 BTBN9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
6 Sobic.001G529400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
7 Sobic.009G167500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
8 Sobic.010G176900 expressed protein -
9 Sobic.007G198000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AIR12, putative, expressed -
10 Sobic.001G004800 receptor protein kinase, putative, expressed -
11 Sobic.003G057100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
12 Sobic.002G390600 sec20 domain containing protein, expressed K08494: novel plant SNARE
13 Sobic.003G187100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.010G095600 RING-H2 finger protein, putative, expressed -
15 Sobic.004G279601 - K11254: histone H4
16 Sobic.002G350400 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
17 Sobic.001G261549 - -
18 Sobic.004G168800 expressed protein -
19 Sobic.008G172100 ribosomal protein, putative, expressed K02874: RP-L14, MRPL14, large subunit ribosomal protein L14
20 Sobic.001G496700 IQ calmodulin-binding motif family protein, putative, expressed -


Gene co-expression network
sample Sobic010G238100 Sobic010G238100 Sobic001G533000 Sobic001G533000 Sobic010G238100--Sobic001G533000 Sobic001G054800 Sobic001G054800 Sobic010G238100--Sobic001G054800 Sobic002G291066 Sobic002G291066 Sobic010G238100--Sobic002G291066 Sobic003G338966 Sobic003G338966 Sobic010G238100--Sobic003G338966 Sobic001G096900 Sobic001G096900 Sobic010G238100--Sobic001G096900 Sobic001G529400 Sobic001G529400 Sobic010G238100--Sobic001G529400 Sobic009G167500 Sobic009G167500 Sobic010G238100--Sobic009G167500 Sobic010G176900 Sobic010G176900 Sobic010G238100--Sobic010G176900 Sobic007G198000 Sobic007G198000 Sobic010G238100--Sobic007G198000 Sobic003G379600 Sobic003G379600 Sobic001G533000--Sobic003G379600 Sobic006G137800 Sobic006G137800 Sobic001G533000--Sobic006G137800 Sobic004G345500 Sobic004G345500 Sobic001G533000--Sobic004G345500 Sobic001G533000--Sobic007G198000 Sobic001G533000--Sobic001G529400 Sobic003G078200 Sobic003G078200 Sobic001G533000--Sobic003G078200 Sobic010G047100 Sobic010G047100 Sobic001G533000--Sobic010G047100 Sobic004G171400 Sobic004G171400 Sobic001G533000--Sobic004G171400 Sobic003G160700 Sobic003G160700 Sobic001G533000--Sobic003G160700 Sobic002G276000 Sobic002G276000 Sobic001G054800--Sobic002G276000 Sobic003G057100 Sobic003G057100 Sobic001G054800--Sobic003G057100 Sobic001G054800--Sobic002G291066 Sobic001G054800--Sobic007G198000 Sobic001G009700 Sobic001G009700 Sobic001G054800--Sobic001G009700 Sobic001G054800--Sobic001G529400 Sobic003G347900 Sobic003G347900 Sobic001G054800--Sobic003G347900 Sobic001G054800--Sobic009G167500 Sobic001G054800--Sobic010G047100 Sobic002G291066--Sobic001G054800 Sobic002G291066--Sobic001G529400 Sobic002G291066--Sobic003G057100 Sobic006G186700 Sobic006G186700 Sobic002G291066--Sobic006G186700 Sobic002G291066--Sobic002G276000 Sobic001G313200 Sobic001G313200 Sobic002G291066--Sobic001G313200 Sobic002G291066--Sobic007G198000 Sobic002G291066--Sobic010G047100 Sobic010G057100 Sobic010G057100 Sobic002G291066--Sobic010G057100 Sobic004G099500 Sobic004G099500 Sobic003G338966--Sobic004G099500 Sobic008G172100 Sobic008G172100 Sobic003G338966--Sobic008G172100 Sobic004G244800 Sobic004G244800 Sobic003G338966--Sobic004G244800 Sobic006G057200 Sobic006G057200 Sobic003G338966--Sobic006G057200 Sobic009G242300 Sobic009G242300 Sobic003G338966--Sobic009G242300 Sobic001G175300 Sobic001G175300 Sobic003G338966--Sobic001G175300 Sobic003G338966--Sobic010G057100 Sobic003G338966--Sobic007G198000 Sobic003G338966--Sobic002G291066 Sobic001G096900--Sobic010G238100 Sobic002G390600 Sobic002G390600 Sobic001G096900--Sobic002G390600 Sobic001G496700 Sobic001G496700 Sobic001G096900--Sobic001G496700 Sobic001G096900--Sobic001G054800 Sobic001G096900--Sobic009G167500 Sobic004G189600 Sobic004G189600 Sobic001G096900--Sobic004G189600 Sobic003G187100 Sobic003G187100 Sobic001G096900--Sobic003G187100 Sobic008G156900 Sobic008G156900 Sobic001G096900--Sobic008G156900 Sobic001G096900--Sobic001G009700 Sobic001G529400--Sobic001G313200 Sobic001G529400--Sobic010G047100 Sobic006G191800 Sobic006G191800 Sobic001G529400--Sobic006G191800 Sobic009G015900 Sobic009G015900 Sobic001G529400--Sobic009G015900 Sobic001G529400--Sobic003G347900 Sobic010G221300 Sobic010G221300 Sobic001G529400--Sobic010G221300 Sobic001G529400--Sobic003G078200 Sobic001G529400--Sobic006G137800 Sobic001G529400--Sobic003G057100 Sobic009G167500--Sobic001G009700 Sobic003G057366 Sobic003G057366 Sobic009G167500--Sobic003G057366 Sobic001G416900 Sobic001G416900 Sobic009G167500--Sobic001G416900 Sobic004G259700 Sobic004G259700 Sobic009G167500--Sobic004G259700 Sobic009G167500--Sobic002G276000 Sobic010G013100 Sobic010G013100 Sobic009G167500--Sobic010G013100 Sobic009G167500--Sobic003G057100 Sobic009G167500--Sobic001G054800 Sobic003G127600 Sobic003G127600 Sobic009G167500--Sobic003G127600 Sobic003G122200 Sobic003G122200 Sobic010G176900--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic010G176900--Sobic001G131600 Sobic009G189200 Sobic009G189200 Sobic010G176900--Sobic009G189200 Sobic002G350400 Sobic002G350400 Sobic010G176900--Sobic002G350400 Sobic004G279601 Sobic004G279601 Sobic010G176900--Sobic004G279601 Sobic003G074900 Sobic003G074900 Sobic010G176900--Sobic003G074900 Sobic004G183200 Sobic004G183200 Sobic010G176900--Sobic004G183200 Sobic003G266400 Sobic003G266400 Sobic010G176900--Sobic003G266400 Sobic003G444200 Sobic003G444200 Sobic010G176900--Sobic003G444200 Sobic007G198000--Sobic003G347900 Sobic007G198000--Sobic006G057200 Sobic007G198000--Sobic001G529400 Sobic010G070500 Sobic010G070500 Sobic007G198000--Sobic010G070500 Sobic007G198000--Sobic003G160700 Sobic007G198000--Sobic010G047100 Sobic001G475500 Sobic001G475500 Sobic007G198000--Sobic001G475500 Sobic003G027400 Sobic003G027400 Sobic007G198000--Sobic003G027400 Sobic007G198000--Sobic003G379600
Octagon: transcription factors


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