Gene annotation
Transcriptome id Sobic.003G341200.1
Synonym Sb03g038520
Functional annotation expressed protein
UniProt C5XNW6
Pfam PF14009
Panther DB PTHR33052 PTHR33052:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30230 : -
RAP-DB (Rice) LOC_Os05g39710.1 : expressed protein
MaizeGDB (Corn) Zm00025a027024 , Zm00025a039746 , Zm00025a043966
Brachypodium KQK05784 , KQK07319 , KQK10386
Barley HORVU3Hr1G088220.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G006200 auxin-induced protein 5NG4, putative, expressed -
2 Sobic.004G300701 - -
3 Sobic.004G342900 RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
4 Sobic.003G347200 expressed protein -
5 Sobic.002G350700 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
6 Sobic.006G266300 expressed protein -
7 Sobic.002G050400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@LTPL78 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.010G158200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G318501 - -
10 Sobic.001G161601 - K14484: auxin-responsive protein IAA
11 Sobic.003G337100 expressed protein -
12 Sobic.005G139075 - -
13 Sobic.003G283500 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
14 Sobic.002G276000 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
15 Sobic.001G425300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G112100 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
17 Sobic.006G000400 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
18 Sobic.010G057100 expressed protein K02983: RP-S30e, small subunit ribosomal protein S30e
19 Sobic.003G347900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
20 Sobic.003G057100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4


Gene co-expression network
sample Sobic003G341200 Sobic003G341200 Sobic009G006200 Sobic009G006200 Sobic003G341200--Sobic009G006200 Sobic004G300701 Sobic004G300701 Sobic003G341200--Sobic004G300701 Sobic004G342900 Sobic004G342900 Sobic003G341200--Sobic004G342900 Sobic003G347200 Sobic003G347200 Sobic003G341200--Sobic003G347200 Sobic002G350700 Sobic002G350700 Sobic003G341200--Sobic002G350700 Sobic006G266300 Sobic006G266300 Sobic003G341200--Sobic006G266300 Sobic002G050400 Sobic002G050400 Sobic003G341200--Sobic002G050400 Sobic010G158200 Sobic010G158200 Sobic003G341200--Sobic010G158200 Sobic002G318501 Sobic002G318501 Sobic003G341200--Sobic002G318501 Sobic001G112100 Sobic001G112100 Sobic009G006200--Sobic001G112100 Sobic008G009400 Sobic008G009400 Sobic009G006200--Sobic008G009400 Sobic004G297900 Sobic004G297900 Sobic009G006200--Sobic004G297900 Sobic009G006200--Sobic002G050400 Sobic006G235200 Sobic006G235200 Sobic009G006200--Sobic006G235200 Sobic004G295100 Sobic004G295100 Sobic009G006200--Sobic004G295100 Sobic002G351300 Sobic002G351300 Sobic009G006200--Sobic002G351300 Sobic003G299300 Sobic003G299300 Sobic009G006200--Sobic003G299300 SobicK026900 SobicK026900 Sobic009G006200--SobicK026900 Sobic003G283500 Sobic003G283500 Sobic004G300701--Sobic003G283500 Sobic007G224800 Sobic007G224800 Sobic004G300701--Sobic007G224800 Sobic001G430000 Sobic001G430000 Sobic004G300701--Sobic001G430000 Sobic010G099400 Sobic010G099400 Sobic004G300701--Sobic010G099400 Sobic004G300701--Sobic004G342900 Sobic003G337100 Sobic003G337100 Sobic004G300701--Sobic003G337100 Sobic010G013100 Sobic010G013100 Sobic004G300701--Sobic010G013100 Sobic005G016600 Sobic005G016600 Sobic004G300701--Sobic005G016600 Sobic003G201300 Sobic003G201300 Sobic004G300701--Sobic003G201300 Sobic004G342900--Sobic003G337100 Sobic002G326000 Sobic002G326000 Sobic004G342900--Sobic002G326000 Sobic004G342900--Sobic010G158200 Sobic002G253000 Sobic002G253000 Sobic004G342900--Sobic002G253000 Sobic006G075801 Sobic006G075801 Sobic004G342900--Sobic006G075801 Sobic004G342900--Sobic005G016600 Sobic004G342900--Sobic004G300701 Sobic004G342900--Sobic003G283500 Sobic009G167300 Sobic009G167300 Sobic004G342900--Sobic009G167300 Sobic003G353800 Sobic003G353800 Sobic003G347200--Sobic003G353800 Sobic001G440200 Sobic001G440200 Sobic003G347200--Sobic001G440200 Sobic001G035100 Sobic001G035100 Sobic003G347200--Sobic001G035100 Sobic003G323201 Sobic003G323201 Sobic003G347200--Sobic003G323201 Sobic003G347200--Sobic003G341200 Sobic003G347200--Sobic004G342900 Sobic007G122500 Sobic007G122500 Sobic003G347200--Sobic007G122500 Sobic004G097100 Sobic004G097100 Sobic003G347200--Sobic004G097100 Sobic006G187900 Sobic006G187900 Sobic003G347200--Sobic006G187900 Sobic001G161601 Sobic001G161601 Sobic002G350700--Sobic001G161601 Sobic001G059700 Sobic001G059700 Sobic002G350700--Sobic001G059700 Sobic010G085800 Sobic010G085800 Sobic002G350700--Sobic010G085800 Sobic002G350700--Sobic001G112100 Sobic009G232100 Sobic009G232100 Sobic002G350700--Sobic009G232100 Sobic009G088900 Sobic009G088900 Sobic002G350700--Sobic009G088900 Sobic001G159900 Sobic001G159900 Sobic002G350700--Sobic001G159900 Sobic004G055100 Sobic004G055100 Sobic002G350700--Sobic004G055100 Sobic001G264700 Sobic001G264700 Sobic002G350700--Sobic001G264700 Sobic009G042900 Sobic009G042900 Sobic006G266300--Sobic009G042900 Sobic003G043700 Sobic003G043700 Sobic006G266300--Sobic003G043700 Sobic009G121900 Sobic009G121900 Sobic006G266300--Sobic009G121900 Sobic006G266300--Sobic009G232100 Sobic006G266300--Sobic002G350700 Sobic006G266300--Sobic001G161601 Sobic002G270000 Sobic002G270000 Sobic006G266300--Sobic002G270000 Sobic003G347900 Sobic003G347900 Sobic006G266300--Sobic003G347900 Sobic001G418100 Sobic001G418100 Sobic006G266300--Sobic001G418100 Sobic002G050400--Sobic009G006200 Sobic003G057600 Sobic003G057600 Sobic002G050400--Sobic003G057600 Sobic003G057366 Sobic003G057366 Sobic002G050400--Sobic003G057366 Sobic004G099500 Sobic004G099500 Sobic002G050400--Sobic004G099500 Sobic010G057100 Sobic010G057100 Sobic002G050400--Sobic010G057100 Sobic009G015000 Sobic009G015000 Sobic002G050400--Sobic009G015000 Sobic002G276000 Sobic002G276000 Sobic002G050400--Sobic002G276000 Sobic007G168400 Sobic007G168400 Sobic002G050400--Sobic007G168400 Sobic003G322532 Sobic003G322532 Sobic002G050400--Sobic003G322532 Sobic010G158200--Sobic006G075801 Sobic010G158200--Sobic002G326000 Sobic010G158200--Sobic003G337100 Sobic010G158200--Sobic004G342900 Sobic010G125400 Sobic010G125400 Sobic010G158200--Sobic010G125400 Sobic010G158200--Sobic002G253000 Sobic002G171600 Sobic002G171600 Sobic010G158200--Sobic002G171600 Sobic010G158200--Sobic002G318501 Sobic010G158200--Sobic009G167300 Sobic002G318501--Sobic002G253000 Sobic001G425300 Sobic001G425300 Sobic002G318501--Sobic001G425300 Sobic002G314700 Sobic002G314700 Sobic002G318501--Sobic002G314700 Sobic001G313200 Sobic001G313200 Sobic002G318501--Sobic001G313200 Sobic005G139075 Sobic005G139075 Sobic002G318501--Sobic005G139075 Sobic005G029200 Sobic005G029200 Sobic002G318501--Sobic005G029200 Sobic002G318501--Sobic003G322532 Sobic004G189400 Sobic004G189400 Sobic002G318501--Sobic004G189400 Sobic006G099900 Sobic006G099900 Sobic002G318501--Sobic006G099900
Octagon: transcription factors


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