Gene annotation
Transcriptome id Sobic.003G347200.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6Q6X9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g38940.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -
2 Sobic.001G440200 senescence-associated protein, putative, expressed -
3 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
4 Sobic.003G323201 - -
5 Sobic.003G341200 expressed protein -
6 Sobic.004G342900 RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
7 Sobic.007G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.004G097100 F-box family protein, putative, expressed -
9 Sobic.006G187900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
10 Sobic.010G064000 expressed protein -
11 Sobic.001G495132 - -
12 Sobic.002G318501 - -
13 Sobic.008G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
14 Sobic.004G222500 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
15 Sobic.004G228500 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
17 Sobic.004G283500 MATE domain containing protein, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
18 Sobic.003G380900 Not investigated(PubMedID : 23766026)@"SERF1(Ortholog in rice:Schmidt et al., 2013)"(PubMedID : 31659872)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
19 Sobic.004G352000 cytochrome P450, putative, expressed -
20 Sobic.009G194400 expressed protein -


Gene co-expression network
sample Sobic003G347200 Sobic003G347200 Sobic003G353800 Sobic003G353800 Sobic003G347200--Sobic003G353800 Sobic001G440200 Sobic001G440200 Sobic003G347200--Sobic001G440200 Sobic001G035100 Sobic001G035100 Sobic003G347200--Sobic001G035100 Sobic003G323201 Sobic003G323201 Sobic003G347200--Sobic003G323201 Sobic003G341200 Sobic003G341200 Sobic003G347200--Sobic003G341200 Sobic004G342900 Sobic004G342900 Sobic003G347200--Sobic004G342900 Sobic007G122500 Sobic007G122500 Sobic003G347200--Sobic007G122500 Sobic004G097100 Sobic004G097100 Sobic003G347200--Sobic004G097100 Sobic006G187900 Sobic006G187900 Sobic003G347200--Sobic006G187900 Sobic009G217600 Sobic009G217600 Sobic003G353800--Sobic009G217600 Sobic001G341600 Sobic001G341600 Sobic003G353800--Sobic001G341600 Sobic001G441100 Sobic001G441100 Sobic003G353800--Sobic001G441100 Sobic001G035000 Sobic001G035000 Sobic003G353800--Sobic001G035000 Sobic002G278500 Sobic002G278500 Sobic003G353800--Sobic002G278500 Sobic001G077400 Sobic001G077400 Sobic003G353800--Sobic001G077400 Sobic009G217500 Sobic009G217500 Sobic003G353800--Sobic009G217500 Sobic008G042900 Sobic008G042900 Sobic003G353800--Sobic008G042900 Sobic003G416500 Sobic003G416500 Sobic003G353800--Sobic003G416500 Sobic010G196600 Sobic010G196600 Sobic001G440200--Sobic010G196600 Sobic004G283500 Sobic004G283500 Sobic001G440200--Sobic004G283500 Sobic009G194400 Sobic009G194400 Sobic001G440200--Sobic009G194400 Sobic001G440200--Sobic001G035100 Sobic001G279701 Sobic001G279701 Sobic001G440200--Sobic001G279701 Sobic003G370600 Sobic003G370600 Sobic001G440200--Sobic003G370600 Sobic006G170000 Sobic006G170000 Sobic001G440200--Sobic006G170000 Sobic001G440200--Sobic004G097100 Sobic008G187001 Sobic008G187001 Sobic001G440200--Sobic008G187001 Sobic002G220000 Sobic002G220000 Sobic001G035100--Sobic002G220000 Sobic003G093000 Sobic003G093000 Sobic001G035100--Sobic003G093000 Sobic003G428700 Sobic003G428700 Sobic001G035100--Sobic003G428700 Sobic004G219800 Sobic004G219800 Sobic001G035100--Sobic004G219800 Sobic004G169200 Sobic004G169200 Sobic001G035100--Sobic004G169200 Sobic001G035100--Sobic004G097100 Sobic004G222500 Sobic004G222500 Sobic001G035100--Sobic004G222500 Sobic009G241801 Sobic009G241801 Sobic001G035100--Sobic009G241801 Sobic001G471200 Sobic001G471200 Sobic001G035100--Sobic001G471200 Sobic003G323201--Sobic009G194400 Sobic003G323201--Sobic010G196600 Sobic001G425500 Sobic001G425500 Sobic003G323201--Sobic001G425500 Sobic004G109700 Sobic004G109700 Sobic003G323201--Sobic004G109700 Sobic001G425600 Sobic001G425600 Sobic003G323201--Sobic001G425600 Sobic004G308900 Sobic004G308900 Sobic003G323201--Sobic004G308900 Sobic004G109600 Sobic004G109600 Sobic003G323201--Sobic004G109600 Sobic002G388900 Sobic002G388900 Sobic003G323201--Sobic002G388900 Sobic009G144700 Sobic009G144700 Sobic003G323201--Sobic009G144700 Sobic009G006200 Sobic009G006200 Sobic003G341200--Sobic009G006200 Sobic004G300701 Sobic004G300701 Sobic003G341200--Sobic004G300701 Sobic003G341200--Sobic004G342900 Sobic003G341200--Sobic003G347200 Sobic002G350700 Sobic002G350700 Sobic003G341200--Sobic002G350700 Sobic006G266300 Sobic006G266300 Sobic003G341200--Sobic006G266300 Sobic002G050400 Sobic002G050400 Sobic003G341200--Sobic002G050400 Sobic010G158200 Sobic010G158200 Sobic003G341200--Sobic010G158200 Sobic002G318501 Sobic002G318501 Sobic003G341200--Sobic002G318501 Sobic003G337100 Sobic003G337100 Sobic004G342900--Sobic003G337100 Sobic002G326000 Sobic002G326000 Sobic004G342900--Sobic002G326000 Sobic004G342900--Sobic010G158200 Sobic002G253000 Sobic002G253000 Sobic004G342900--Sobic002G253000 Sobic006G075801 Sobic006G075801 Sobic004G342900--Sobic006G075801 Sobic005G016600 Sobic005G016600 Sobic004G342900--Sobic005G016600 Sobic004G342900--Sobic004G300701 Sobic003G283500 Sobic003G283500 Sobic004G342900--Sobic003G283500 Sobic009G167300 Sobic009G167300 Sobic004G342900--Sobic009G167300 Sobic007G122500--Sobic001G035000 Sobic007G122500--Sobic001G441100 Sobic005G037000 Sobic005G037000 Sobic007G122500--Sobic005G037000 Sobic004G032300 Sobic004G032300 Sobic007G122500--Sobic004G032300 Sobic009G120800 Sobic009G120800 Sobic007G122500--Sobic009G120800 Sobic002G225700 Sobic002G225700 Sobic007G122500--Sobic002G225700 Sobic007G126300 Sobic007G126300 Sobic007G122500--Sobic007G126300 Sobic007G122500--Sobic006G187900 Sobic007G122500--Sobic009G217600 Sobic003G230100 Sobic003G230100 Sobic004G097100--Sobic003G230100 Sobic004G229500 Sobic004G229500 Sobic004G097100--Sobic004G229500 Sobic004G246600 Sobic004G246600 Sobic004G097100--Sobic004G246600 Sobic004G097100--Sobic006G187900 Sobic004G097100--Sobic009G241801 Sobic005G013500 Sobic005G013500 Sobic004G097100--Sobic005G013500 Sobic004G097100--Sobic002G388900 Sobic004G097100--Sobic004G308900 Sobic002G184300 Sobic002G184300 Sobic004G097100--Sobic002G184300 Sobic006G187900--Sobic004G097100 Sobic006G187900--Sobic004G229500 Sobic006G187900--Sobic005G013500 Sobic006G187900--Sobic004G246600 Sobic002G269100 Sobic002G269100 Sobic006G187900--Sobic002G269100 Sobic006G187900--Sobic001G035100 Sobic009G183900 Sobic009G183900 Sobic006G187900--Sobic009G183900 Sobic004G295600 Sobic004G295600 Sobic006G187900--Sobic004G295600 Sobic006G187900--Sobic002G184300
Octagon: transcription factors


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