Gene annotation
Transcriptome id Sobic.002G187400.2,Sobic.002G187400.3,Sobic.002G187400.1
Synonym Sb02g023540
Functional annotation serine/threonine-protein kinase, putative, expressed
UniProt C5XBE0
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF150
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04733; interleukin-1 receptor-associated kinase 4
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G24030 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os09g20880.2,LOC_Os09g20880.1 : serine/threonine-protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a013833 , Zm00025a040295 , Zm00025a023581 , Zm00025a000434 , Zm00025a053364
Brachypodium KQJ90075 , KQK23550 , KQK01632 , KQK23335 , KQJ90076
Barley HORVU5Hr1G059070.8 , HORVU5Hr1G059070.1 , HORVU5Hr1G059070.2 , HORVU5Hr1G059070.3 , HORVU5Hr1G059070.4 , HORVU5Hr1G059070.5 , HORVU5Hr1G059070.6 , HORVU5Hr1G059070.7 , HORVU4Hr1G076520.3 , HORVU4Hr1G076520.5 , HORVU3Hr1G007120.4 , HORVU3Hr1G007120.3 , HORVU3Hr1G007120.2 , HORVU3Hr1G007120.1
Wheat TraesCS3B02G046700 , TraesCS5D02G203800 , TraesCS3A02G037200 , TraesCS4B02G228200 , TraesCS4B02G228200 , TraesCS4B02G228200 , TraesCS4A02G031000 , TraesCS4A02G031000 , TraesCS4B02G294300 , TraesCS4B02G275000 , TraesCS4D02G273600 , TraesCS4D02G293200 , TraesCS3D02G042500 , TraesCS5B02G196600 , TraesCS5A02G187300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G180900 BAG domain-containing protein, putative, expressed -
2 Sobic.004G007600 glycosyltransferase protein, putative, expressed -
3 Sobic.004G257800 chloride transporter, chloride channel family, putative, expressed -
4 Sobic.003G254700 glycosyltransferase family 43 protein, putative, expressed -
5 Sobic.002G075500 CESA8 - cellulose synthase, expressed K10999: cellulose synthase A
6 Sobic.009G026101 - -
7 Sobic.001G072600 expressed protein -
8 Sobic.001G133900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
9 Sobic.009G125900 expressed protein -
10 Sobic.002G218900 plant viral response family protein, putative, expressed -
11 Sobic.004G111100 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.007G009500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_CR4L.6 - The CR4L subfamily has homology with Crinkly4, expressed -
13 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
14 Sobic.001G063500 fasciclin domain containing protein, expressed -
15 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
16 Sobic.001G336700 "Involved in secondary cell wall formation. Reduced mechanical strength in culms and leaves, thinner cell walls, reduced cellulose content, increased lignin content, in the mutant. The highest gene expression level in culms. The highest expression levels in vascular bundles and in sub-epidermal regions, where developing sclerenchyma cells are located."(PubMedID : 30590744)@COBRA-like protein precursor, putative, expressed -
17 Sobic.004G319600 polygalacturonase, putative, expressed -
18 Sobic.006G156600 transporter family protein, putative, expressed -
19 Sobic.005G229100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
20 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic002G187400 Sobic002G187400 Sobic007G180900 Sobic007G180900 Sobic002G187400--Sobic007G180900 Sobic004G007600 Sobic004G007600 Sobic002G187400--Sobic004G007600 Sobic004G257800 Sobic004G257800 Sobic002G187400--Sobic004G257800 Sobic003G254700 Sobic003G254700 Sobic002G187400--Sobic003G254700 Sobic002G075500 Sobic002G075500 Sobic002G187400--Sobic002G075500 Sobic009G026101 Sobic009G026101 Sobic002G187400--Sobic009G026101 Sobic001G072600 Sobic001G072600 Sobic002G187400--Sobic001G072600 Sobic001G133900 Sobic001G133900 Sobic002G187400--Sobic001G133900 Sobic009G125900 Sobic009G125900 Sobic002G187400--Sobic009G125900 Sobic003G144600 Sobic003G144600 Sobic007G180900--Sobic003G144600 Sobic007G180900--Sobic002G075500 Sobic007G180900--Sobic002G187400 Sobic002G118700 Sobic002G118700 Sobic007G180900--Sobic002G118700 Sobic004G261200 Sobic004G261200 Sobic007G180900--Sobic004G261200 Sobic007G180900--Sobic004G257800 Sobic003G198400 Sobic003G198400 Sobic007G180900--Sobic003G198400 Sobic009G099000 Sobic009G099000 Sobic007G180900--Sobic009G099000 Sobic003G353400 Sobic003G353400 Sobic007G180900--Sobic003G353400 Sobic004G007600--Sobic001G133900 Sobic004G007600--Sobic003G254700 Sobic004G007600--Sobic009G026101 Sobic004G319600 Sobic004G319600 Sobic004G007600--Sobic004G319600 Sobic004G111100 Sobic004G111100 Sobic004G007600--Sobic004G111100 Sobic006G075000 Sobic006G075000 Sobic004G007600--Sobic006G075000 Sobic004G007600--Sobic009G125900 Sobic004G007600--Sobic002G075500 Sobic006G156600 Sobic006G156600 Sobic004G007600--Sobic006G156600 Sobic004G257800--Sobic006G156600 Sobic004G172100 Sobic004G172100 Sobic004G257800--Sobic004G172100 Sobic004G257800--Sobic002G075500 Sobic001G108350 Sobic001G108350 Sobic004G257800--Sobic001G108350 Sobic002G372800 Sobic002G372800 Sobic004G257800--Sobic002G372800 Sobic004G257800--Sobic007G180900 Sobic007G009500 Sobic007G009500 Sobic004G257800--Sobic007G009500 Sobic004G257800--Sobic009G099000 Sobic005G110490 Sobic005G110490 Sobic004G257800--Sobic005G110490 Sobic003G254700--Sobic004G111100 Sobic003G254700--Sobic004G007600 Sobic003G254700--Sobic001G133900 Sobic003G254700--Sobic009G026101 Sobic003G254700--Sobic001G072600 Sobic009G246700 Sobic009G246700 Sobic003G254700--Sobic009G246700 Sobic003G254700--Sobic009G125900 Sobic003G254700--Sobic002G075500 Sobic002G218900 Sobic002G218900 Sobic003G254700--Sobic002G218900 Sobic009G063400 Sobic009G063400 Sobic002G075500--Sobic009G063400 Sobic002G075500--Sobic009G125900 Sobic002G075500--Sobic002G118700 Sobic002G075500--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic002G075500--Sobic004G051300 Sobic001G099100 Sobic001G099100 Sobic002G075500--Sobic001G099100 Sobic002G075500--Sobic007G180900 Sobic002G075500--Sobic003G254700 Sobic002G075500--Sobic006G156600 Sobic009G026101--Sobic001G133900 Sobic009G026101--Sobic009G063400 Sobic009G026101--Sobic009G125900 Sobic009G026101--Sobic009G246700 Sobic009G206500 Sobic009G206500 Sobic009G026101--Sobic009G206500 Sobic009G026101--Sobic002G075500 Sobic009G026101--Sobic006G075000 Sobic009G026101--Sobic003G254700 Sobic010G096100 Sobic010G096100 Sobic009G026101--Sobic010G096100 Sobic002G167600 Sobic002G167600 Sobic001G072600--Sobic002G167600 Sobic001G072600--Sobic002G218900 Sobic007G119500 Sobic007G119500 Sobic001G072600--Sobic007G119500 Sobic001G360700 Sobic001G360700 Sobic001G072600--Sobic001G360700 Sobic004G047600 Sobic004G047600 Sobic001G072600--Sobic004G047600 Sobic006G144600 Sobic006G144600 Sobic001G072600--Sobic006G144600 Sobic001G072600--Sobic009G246700 Sobic007G047300 Sobic007G047300 Sobic001G072600--Sobic007G047300 Sobic009G170500 Sobic009G170500 Sobic001G072600--Sobic009G170500 Sobic001G133900--Sobic009G026101 Sobic001G133900--Sobic009G246700 Sobic001G133900--Sobic004G007600 Sobic001G133900--Sobic003G254700 Sobic010G180100 Sobic010G180100 Sobic001G133900--Sobic010G180100 Sobic001G133900--Sobic004G111100 Sobic001G133900--Sobic002G075500 Sobic009G079100 Sobic009G079100 Sobic001G133900--Sobic009G079100 Sobic001G133900--Sobic009G125900 Sobic009G125900--Sobic009G063400 Sobic009G125900--Sobic009G026101 Sobic009G125900--Sobic002G075500 Sobic009G125900--Sobic002G118700 Sobic010G090500 Sobic010G090500 Sobic009G125900--Sobic010G090500 Sobic004G265600 Sobic004G265600 Sobic009G125900--Sobic004G265600 Sobic009G125900--Sobic010G096100 Sobic009G125900--Sobic004G051300 Sobic009G125900--Sobic003G254700
Octagon: transcription factors


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