Gene annotation
Transcriptome id Sobic.005G016300.1
Synonym Sb05g001370
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Y3J8
Pfam PF06075
Panther DB PTHR31928 PTHR31928:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13370 : Plant protein of unknown function (DUF936)
RAP-DB (Rice) LOC_Os11g02740.1 : expressed protein
MaizeGDB (Corn) Zm00025a033324
Brachypodium KQJ89486
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G207700 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
2 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
3 Sobic.001G075400 expressed protein -
4 Sobic.005G210600 expressed protein -
5 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
6 Sobic.006G134200 expressed protein -
7 Sobic.010G111200 "GASR7(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659934)@GASR7 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
8 Sobic.001G205000 ATEB1A-like microtubule associated protein, putative, expressed K10436: microtubule-associated protein, RP/EB family
9 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
10 Sobic.006G069500 glutaredoxin, putative, expressed -
11 Sobic.009G233500 expressed protein -
12 Sobic.006G214000 expressed protein K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
13 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
14 Sobic.001G299600 GATA zinc finger domain containing protein, expressed -
15 Sobic.001G140600 expressed protein -
16 Sobic.004G180400 remorin family protein, putative, expressed -
17 Sobic.003G239600 chloroplast unusual positioning protein, putative, expressed -
18 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
19 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
20 Sobic.010G234800 expressed protein -


Gene co-expression network
sample Sobic005G016300 Sobic005G016300 Sobic007G207700 Sobic007G207700 Sobic005G016300--Sobic007G207700 Sobic004G077100 Sobic004G077100 Sobic005G016300--Sobic004G077100 Sobic001G075400 Sobic001G075400 Sobic005G016300--Sobic001G075400 Sobic005G210600 Sobic005G210600 Sobic005G016300--Sobic005G210600 Sobic003G328500 Sobic003G328500 Sobic005G016300--Sobic003G328500 Sobic006G134200 Sobic006G134200 Sobic005G016300--Sobic006G134200 Sobic010G111200 Sobic010G111200 Sobic005G016300--Sobic010G111200 Sobic001G205000 Sobic001G205000 Sobic005G016300--Sobic001G205000 Sobic002G313000 Sobic002G313000 Sobic005G016300--Sobic002G313000 Sobic007G207700--Sobic003G328500 Sobic007G207700--Sobic006G134200 Sobic007G207700--Sobic005G016300 Sobic007G017700 Sobic007G017700 Sobic007G207700--Sobic007G017700 Sobic007G207700--Sobic001G075400 Sobic006G179200 Sobic006G179200 Sobic007G207700--Sobic006G179200 Sobic001G091500 Sobic001G091500 Sobic007G207700--Sobic001G091500 Sobic007G207700--Sobic005G210600 Sobic007G207700--Sobic002G313000 Sobic004G077100--Sobic001G075400 Sobic009G233500 Sobic009G233500 Sobic004G077100--Sobic009G233500 Sobic006G069500 Sobic006G069500 Sobic004G077100--Sobic006G069500 Sobic004G180400 Sobic004G180400 Sobic004G077100--Sobic004G180400 Sobic003G041700 Sobic003G041700 Sobic004G077100--Sobic003G041700 Sobic004G077100--Sobic005G016300 Sobic003G273800 Sobic003G273800 Sobic004G077100--Sobic003G273800 Sobic010G104400 Sobic010G104400 Sobic004G077100--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic004G077100--Sobic006G214000 Sobic001G075400--Sobic003G328500 Sobic001G075400--Sobic004G077100 Sobic001G177900 Sobic001G177900 Sobic001G075400--Sobic001G177900 Sobic001G075400--Sobic006G134200 Sobic001G075400--Sobic009G233500 Sobic001G075400--Sobic007G207700 Sobic001G075400--Sobic002G313000 Sobic001G075400--Sobic005G016300 Sobic001G131300 Sobic001G131300 Sobic001G075400--Sobic001G131300 Sobic005G210600--Sobic007G207700 Sobic005G210600--Sobic005G016300 Sobic001G379500 Sobic001G379500 Sobic005G210600--Sobic001G379500 Sobic005G210600--Sobic006G134200 Sobic009G101100 Sobic009G101100 Sobic005G210600--Sobic009G101100 Sobic005G210600--Sobic004G180400 Sobic005G210600--Sobic006G179200 Sobic001G140600 Sobic001G140600 Sobic005G210600--Sobic001G140600 Sobic010G003300 Sobic010G003300 Sobic005G210600--Sobic010G003300 Sobic003G328500--Sobic006G134200 Sobic003G328500--Sobic001G177900 Sobic003G328500--Sobic001G075400 Sobic003G328500--Sobic007G207700 Sobic003G387700 Sobic003G387700 Sobic003G328500--Sobic003G387700 Sobic004G257600 Sobic004G257600 Sobic003G328500--Sobic004G257600 Sobic003G260700 Sobic003G260700 Sobic003G328500--Sobic003G260700 Sobic005G144600 Sobic005G144600 Sobic003G328500--Sobic005G144600 Sobic002G426800 Sobic002G426800 Sobic003G328500--Sobic002G426800 Sobic006G134200--Sobic003G328500 Sobic006G134200--Sobic003G387700 Sobic006G134200--Sobic007G207700 Sobic006G134200--Sobic004G257600 Sobic007G100600 Sobic007G100600 Sobic006G134200--Sobic007G100600 Sobic006G134200--Sobic001G075400 Sobic006G134200--Sobic001G177900 Sobic010G105400 Sobic010G105400 Sobic006G134200--Sobic010G105400 Sobic006G134200--Sobic005G144600 Sobic001G299600 Sobic001G299600 Sobic010G111200--Sobic001G299600 Sobic010G216600 Sobic010G216600 Sobic010G111200--Sobic010G216600 Sobic001G540900 Sobic001G540900 Sobic010G111200--Sobic001G540900 Sobic004G313200 Sobic004G313200 Sobic010G111200--Sobic004G313200 Sobic002G222500 Sobic002G222500 Sobic010G111200--Sobic002G222500 Sobic010G111200--Sobic002G426800 Sobic010G111200--Sobic003G260700 Sobic010G111200--Sobic003G328500 Sobic002G394500 Sobic002G394500 Sobic010G111200--Sobic002G394500 Sobic004G279601 Sobic004G279601 Sobic001G205000--Sobic004G279601 Sobic001G205000--Sobic007G207700 Sobic001G205000--Sobic003G328500 Sobic004G285900 Sobic004G285900 Sobic001G205000--Sobic004G285900 Sobic001G205000--Sobic006G134200 Sobic003G057100 Sobic003G057100 Sobic001G205000--Sobic003G057100 Sobic001G205000--Sobic005G016300 Sobic001G078600 Sobic001G078600 Sobic001G205000--Sobic001G078600 Sobic006G076400 Sobic006G076400 Sobic001G205000--Sobic006G076400 Sobic010G129700 Sobic010G129700 Sobic002G313000--Sobic010G129700 Sobic002G313000--Sobic003G260700 Sobic008G114900 Sobic008G114900 Sobic002G313000--Sobic008G114900 Sobic008G006800 Sobic008G006800 Sobic002G313000--Sobic008G006800 Sobic008G125700 Sobic008G125700 Sobic002G313000--Sobic008G125700 Sobic002G313000--Sobic001G140600 Sobic002G319300 Sobic002G319300 Sobic002G313000--Sobic002G319300 Sobic001G170800 Sobic001G170800 Sobic002G313000--Sobic001G170800 Sobic001G398400 Sobic001G398400 Sobic002G313000--Sobic001G398400
Octagon: transcription factors


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