Gene annotation
Transcriptome id Sobic.006G260600.2,Sobic.006G260600.3,Sobic.006G260600.1,Sobic.006G260600.4
Synonym Sb06g032350
Functional annotation OTU-like cysteine protease family protein, putative, expressed
UniProt C5YA38 , A0A1B6PNZ7 , A0A1B6PP05 , A0A1B6PNZ6
Pfam PF02338
Panther DB PTHR12419 PTHR12419:SF7
NCBI CDD -
KEGG Orthology K13717; OTU domain-containing protein 3
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67170 : SEC-C motif-containing protein / OTU-like cysteine protease family protein
RAP-DB (Rice) LOC_Os04g57480.1 : OTU-like cysteine protease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a009370
Brachypodium KQJ85210 , KQJ85211 , KQJ85209 , KQJ85208 , PNT62103 , PNT62107 , PNT62106 , PNT62105 , PNT62104
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G034400 expressed protein -
2 Sobic.002G052500 - -
3 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
4 Sobic.009G233600 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
5 Sobic.004G356600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G051800 expressed protein K03024: RPC7, DNA-directed RNA polymerase III subunit RPC7
7 Sobic.002G004400 expressed protein -
8 Sobic.006G090201 - -
9 Sobic.007G085350 - -
10 Sobic.006G228400 kinase, putative, expressed -
11 Sobic.003G343100 expressed protein -
12 Sobic.001G267266 - -
13 Sobic.007G072901 - -
14 Sobic.003G245700 3-5 exonuclease domain-containing protein, putative, expressed -
15 Sobic.003G178200 tetratricopeptide repeat containing protein, putative, expressed -
16 Sobic.004G205200 PPR repeat containing protein, expressed -
17 Sobic.009G010800 expressed protein -
18 Sobic.006G166300 WRKY36, expressed -
19 Sobic.005G022400 GATA zinc finger domain containing protein, expressed -
20 Sobic.010G275550 - -


Gene co-expression network
sample Sobic006G260600 Sobic006G260600 Sobic002G034400 Sobic002G034400 Sobic006G260600--Sobic002G034400 Sobic002G052500 Sobic002G052500 Sobic006G260600--Sobic002G052500 Sobic002G356700 Sobic002G356700 Sobic006G260600--Sobic002G356700 Sobic009G233600 Sobic009G233600 Sobic006G260600--Sobic009G233600 Sobic004G356600 Sobic004G356600 Sobic006G260600--Sobic004G356600 Sobic003G051800 Sobic003G051800 Sobic006G260600--Sobic003G051800 Sobic002G004400 Sobic002G004400 Sobic006G260600--Sobic002G004400 Sobic006G090201 Sobic006G090201 Sobic006G260600--Sobic006G090201 Sobic007G085350 Sobic007G085350 Sobic006G260600--Sobic007G085350 Sobic002G034400--Sobic004G356600 Sobic005G097700 Sobic005G097700 Sobic002G034400--Sobic005G097700 Sobic002G034400--Sobic002G356700 Sobic006G228400 Sobic006G228400 Sobic002G034400--Sobic006G228400 Sobic002G034400--Sobic002G052500 Sobic002G034400--Sobic006G090201 Sobic002G034400--Sobic006G260600 Sobic002G034400--Sobic002G004400 Sobic003G245700 Sobic003G245700 Sobic002G034400--Sobic003G245700 Sobic007G072901 Sobic007G072901 Sobic002G052500--Sobic007G072901 Sobic002G052500--Sobic003G245700 Sobic003G343100 Sobic003G343100 Sobic002G052500--Sobic003G343100 Sobic008G023500 Sobic008G023500 Sobic002G052500--Sobic008G023500 Sobic002G052500--Sobic006G090201 Sobic006G185400 Sobic006G185400 Sobic002G052500--Sobic006G185400 Sobic009G010800 Sobic009G010800 Sobic002G052500--Sobic009G010800 Sobic003G178200 Sobic003G178200 Sobic002G052500--Sobic003G178200 Sobic004G330500 Sobic004G330500 Sobic002G052500--Sobic004G330500 Sobic002G356700--Sobic009G233600 Sobic002G356700--Sobic003G178200 Sobic002G356700--Sobic003G245700 Sobic002G356700--Sobic006G090201 Sobic005G022400 Sobic005G022400 Sobic002G356700--Sobic005G022400 Sobic001G361500 Sobic001G361500 Sobic002G356700--Sobic001G361500 Sobic002G356700--Sobic008G023500 Sobic009G164200 Sobic009G164200 Sobic002G356700--Sobic009G164200 Sobic002G356700--Sobic007G072901 Sobic009G233600--Sobic002G356700 Sobic009G229100 Sobic009G229100 Sobic009G233600--Sobic009G229100 Sobic003G364700 Sobic003G364700 Sobic009G233600--Sobic003G364700 Sobic001G511200 Sobic001G511200 Sobic009G233600--Sobic001G511200 Sobic009G233600--Sobic004G356600 Sobic009G233600--Sobic005G022400 Sobic010G145200 Sobic010G145200 Sobic009G233600--Sobic010G145200 Sobic009G233600--Sobic003G178200 Sobic002G237700 Sobic002G237700 Sobic009G233600--Sobic002G237700 Sobic004G356600--Sobic006G090201 Sobic004G356600--Sobic007G072901 Sobic004G356600--Sobic009G010800 Sobic004G356600--Sobic001G361500 Sobic003G423100 Sobic003G423100 Sobic004G356600--Sobic003G423100 Sobic003G357000 Sobic003G357000 Sobic004G356600--Sobic003G357000 Sobic004G356600--Sobic009G164200 Sobic004G356600--Sobic006G185400 Sobic004G356600--Sobic003G245700 Sobic003G051800--Sobic006G260600 Sobic003G051800--Sobic002G356700 Sobic004G098200 Sobic004G098200 Sobic003G051800--Sobic004G098200 Sobic003G051800--Sobic009G233600 Sobic006G272450 Sobic006G272450 Sobic003G051800--Sobic006G272450 Sobic003G051800--Sobic002G052500 Sobic001G019100 Sobic001G019100 Sobic003G051800--Sobic001G019100 Sobic003G051800--Sobic009G010800 Sobic006G201200 Sobic006G201200 Sobic003G051800--Sobic006G201200 Sobic010G014600 Sobic010G014600 Sobic002G004400--Sobic010G014600 Sobic002G004400--Sobic006G090201 Sobic002G004400--Sobic007G072901 Sobic005G189400 Sobic005G189400 Sobic002G004400--Sobic005G189400 Sobic002G004400--Sobic004G330500 Sobic005G037500 Sobic005G037500 Sobic002G004400--Sobic005G037500 Sobic007G152200 Sobic007G152200 Sobic002G004400--Sobic007G152200 Sobic002G004400--Sobic006G185400 Sobic002G004400--Sobic003G343100 Sobic006G090201--Sobic005G189400 Sobic006G090201--Sobic004G330500 Sobic006G090201--Sobic006G185400 Sobic006G090201--Sobic007G152200 Sobic006G209100 Sobic006G209100 Sobic006G090201--Sobic006G209100 Sobic006G090201--Sobic003G245700 Sobic006G090201--Sobic001G361500 Sobic006G090201--Sobic008G023500 Sobic002G205201 Sobic002G205201 Sobic006G090201--Sobic002G205201 Sobic007G085350--Sobic004G356600 Sobic007G085350--Sobic002G356700 Sobic007G085350--Sobic006G272450 Sobic007G085350--Sobic009G010800 Sobic007G085350--Sobic006G090201 Sobic007G085350--Sobic001G361500 Sobic010G231400 Sobic010G231400 Sobic007G085350--Sobic010G231400 Sobic007G085350--Sobic006G209100 Sobic006G239100 Sobic006G239100 Sobic007G085350--Sobic006G239100
Octagon: transcription factors


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