Gene annotation
Transcriptome id Sobic.007G085350.1,Sobic.007G085350.2
Synonym -
Functional annotation -
UniProt A0A1Z5R8P4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G356600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
3 Sobic.006G272450 - -
4 Sobic.009G010800 expressed protein -
5 Sobic.006G090201 - -
6 Sobic.001G361500 expressed protein -
7 Sobic.010G231400 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.006G209100 - -
9 Sobic.006G239100 VQ domain containing protein, putative, expressed -
10 Sobic.005G087600 AP2 domain containing protein, expressed -
11 Sobic.003G245700 3-5 exonuclease domain-containing protein, putative, expressed -
12 Sobic.009G164200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
13 Sobic.007G072901 - -
14 Sobic.006G201200 peptide transporter PTR2, putative, expressed -
15 Sobic.006G185400 - -
16 Sobic.002G052500 - -
17 Sobic.007G210400 lipoxygenase, chloroplast precursor, putative, expressed K00454: lipoxygenase
18 Sobic.004G330500 expressed protein -
19 Sobic.005G189400 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.002G004400 expressed protein -


Gene co-expression network
sample Sobic007G085350 Sobic007G085350 Sobic004G356600 Sobic004G356600 Sobic007G085350--Sobic004G356600 Sobic002G356700 Sobic002G356700 Sobic007G085350--Sobic002G356700 Sobic006G272450 Sobic006G272450 Sobic007G085350--Sobic006G272450 Sobic009G010800 Sobic009G010800 Sobic007G085350--Sobic009G010800 Sobic006G090201 Sobic006G090201 Sobic007G085350--Sobic006G090201 Sobic001G361500 Sobic001G361500 Sobic007G085350--Sobic001G361500 Sobic010G231400 Sobic010G231400 Sobic007G085350--Sobic010G231400 Sobic006G209100 Sobic006G209100 Sobic007G085350--Sobic006G209100 Sobic006G239100 Sobic006G239100 Sobic007G085350--Sobic006G239100 Sobic004G356600--Sobic006G090201 Sobic007G072901 Sobic007G072901 Sobic004G356600--Sobic007G072901 Sobic004G356600--Sobic009G010800 Sobic004G356600--Sobic001G361500 Sobic003G423100 Sobic003G423100 Sobic004G356600--Sobic003G423100 Sobic003G357000 Sobic003G357000 Sobic004G356600--Sobic003G357000 Sobic009G164200 Sobic009G164200 Sobic004G356600--Sobic009G164200 Sobic006G185400 Sobic006G185400 Sobic004G356600--Sobic006G185400 Sobic003G245700 Sobic003G245700 Sobic004G356600--Sobic003G245700 Sobic009G233600 Sobic009G233600 Sobic002G356700--Sobic009G233600 Sobic003G178200 Sobic003G178200 Sobic002G356700--Sobic003G178200 Sobic002G356700--Sobic003G245700 Sobic002G356700--Sobic006G090201 Sobic005G022400 Sobic005G022400 Sobic002G356700--Sobic005G022400 Sobic002G356700--Sobic001G361500 Sobic008G023500 Sobic008G023500 Sobic002G356700--Sobic008G023500 Sobic002G356700--Sobic009G164200 Sobic002G356700--Sobic007G072901 Sobic006G272450--Sobic009G164200 Sobic006G272450--Sobic008G023500 Sobic006G272450--Sobic006G090201 Sobic006G272450--Sobic009G010800 Sobic009G070900 Sobic009G070900 Sobic006G272450--Sobic009G070900 Sobic006G272450--Sobic006G185400 Sobic006G272450--Sobic003G245700 Sobic004G330500 Sobic004G330500 Sobic006G272450--Sobic004G330500 Sobic005G189400 Sobic005G189400 Sobic006G272450--Sobic005G189400 Sobic009G010800--Sobic006G185400 Sobic009G010800--Sobic004G330500 Sobic009G010800--Sobic005G189400 Sobic009G010800--Sobic001G361500 Sobic002G205201 Sobic002G205201 Sobic009G010800--Sobic002G205201 Sobic009G010800--Sobic006G209100 Sobic007G152200 Sobic007G152200 Sobic009G010800--Sobic007G152200 Sobic009G010800--Sobic008G023500 Sobic009G010800--Sobic003G245700 Sobic006G090201--Sobic005G189400 Sobic006G090201--Sobic004G330500 Sobic006G090201--Sobic006G185400 Sobic006G090201--Sobic007G152200 Sobic006G090201--Sobic006G209100 Sobic006G090201--Sobic003G245700 Sobic006G090201--Sobic001G361500 Sobic006G090201--Sobic008G023500 Sobic006G090201--Sobic002G205201 Sobic001G361500--Sobic006G185400 Sobic001G361500--Sobic004G330500 Sobic001G361500--Sobic005G189400 Sobic001G361500--Sobic006G209100 Sobic001G361500--Sobic002G205201 Sobic001G361500--Sobic007G152200 Sobic001G361500--Sobic009G164200 Sobic001G361500--Sobic008G023500 Sobic005G037500 Sobic005G037500 Sobic001G361500--Sobic005G037500 Sobic010G231400--Sobic007G152200 Sobic010G231400--Sobic006G209100 Sobic010G231400--Sobic009G164200 Sobic010G231400--Sobic004G330500 Sobic010G231400--Sobic006G185400 Sobic010G231400--Sobic001G361500 Sobic010G231400--Sobic005G189400 Sobic010G231400--Sobic002G205201 Sobic010G231400--Sobic008G023500 Sobic006G209100--Sobic006G185400 Sobic006G209100--Sobic004G330500 Sobic006G209100--Sobic005G189400 Sobic006G209100--Sobic001G361500 Sobic006G209100--Sobic002G205201 Sobic006G209100--Sobic007G152200 Sobic006G209100--Sobic009G164200 Sobic006G209100--Sobic008G023500 Sobic006G209100--Sobic005G037500 Sobic006G239100--Sobic010G231400 Sobic006G239100--Sobic009G010800 Sobic006G239100--Sobic007G072901 Sobic006G239100--Sobic009G164200 Sobic004G351866 Sobic004G351866 Sobic006G239100--Sobic004G351866 Sobic006G239100--Sobic003G357000 Sobic006G239100--Sobic005G022400 Sobic006G239100--Sobic006G209100 Sobic006G239100--Sobic001G361500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.