Gene annotation
Transcriptome id Sobic.003G051800.2,Sobic.003G051800.1
Synonym Sb03g004500
Functional annotation expressed protein
UniProt A0A1B6Q1L2 , A0A1W0VVS2
Pfam PF11705
Panther DB -
NCBI CDD -
KEGG Orthology K03024; RPC7, DNA-directed RNA polymerase III subunit RPC7
Gene Ontology GO:0006359; regulation of transcription by RNA polymerase III


Orthologs (automatic annotation)
TAIR AT4G01590 : -
RAP-DB (Rice) LOC_Os07g42080.1 : expressed protein
MaizeGDB (Corn) Zm00025a023261
Brachypodium KQK15285 , KQK15284 , KQK15283
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G260600 OTU-like cysteine protease family protein, putative, expressed K13717: OTU domain-containing protein 3
2 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
3 Sobic.004G098200 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.009G233600 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
5 Sobic.006G272450 - -
6 Sobic.002G052500 - -
7 Sobic.001G019100 harpin-induced protein 1 domain containing protein, expressed -
8 Sobic.009G010800 expressed protein -
9 Sobic.006G201200 peptide transporter PTR2, putative, expressed -
10 Sobic.004G356600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.010G074960 - -
12 Sobic.009G194600 expressed protein -
13 Sobic.008G023500 expressed protein -
14 Sobic.008G150150 - -
15 Sobic.003G288900 3-5 exonuclease domain-containing protein, putative, expressed -
16 Sobic.005G022400 GATA zinc finger domain containing protein, expressed -
17 Sobic.001G172900 - -
18 Sobic.003G343100 expressed protein -
19 Sobic.010G275550 - -
20 Sobic.002G037000 ZOS7-02 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic003G051800 Sobic003G051800 Sobic006G260600 Sobic006G260600 Sobic003G051800--Sobic006G260600 Sobic002G356700 Sobic002G356700 Sobic003G051800--Sobic002G356700 Sobic004G098200 Sobic004G098200 Sobic003G051800--Sobic004G098200 Sobic009G233600 Sobic009G233600 Sobic003G051800--Sobic009G233600 Sobic006G272450 Sobic006G272450 Sobic003G051800--Sobic006G272450 Sobic002G052500 Sobic002G052500 Sobic003G051800--Sobic002G052500 Sobic001G019100 Sobic001G019100 Sobic003G051800--Sobic001G019100 Sobic009G010800 Sobic009G010800 Sobic003G051800--Sobic009G010800 Sobic006G201200 Sobic006G201200 Sobic003G051800--Sobic006G201200 Sobic002G034400 Sobic002G034400 Sobic006G260600--Sobic002G034400 Sobic006G260600--Sobic002G052500 Sobic006G260600--Sobic002G356700 Sobic006G260600--Sobic009G233600 Sobic004G356600 Sobic004G356600 Sobic006G260600--Sobic004G356600 Sobic006G260600--Sobic003G051800 Sobic002G004400 Sobic002G004400 Sobic006G260600--Sobic002G004400 Sobic006G090201 Sobic006G090201 Sobic006G260600--Sobic006G090201 Sobic007G085350 Sobic007G085350 Sobic006G260600--Sobic007G085350 Sobic002G356700--Sobic009G233600 Sobic003G178200 Sobic003G178200 Sobic002G356700--Sobic003G178200 Sobic003G245700 Sobic003G245700 Sobic002G356700--Sobic003G245700 Sobic002G356700--Sobic006G090201 Sobic005G022400 Sobic005G022400 Sobic002G356700--Sobic005G022400 Sobic001G361500 Sobic001G361500 Sobic002G356700--Sobic001G361500 Sobic008G023500 Sobic008G023500 Sobic002G356700--Sobic008G023500 Sobic009G164200 Sobic009G164200 Sobic002G356700--Sobic009G164200 Sobic007G072901 Sobic007G072901 Sobic002G356700--Sobic007G072901 Sobic003G357000 Sobic003G357000 Sobic004G098200--Sobic003G357000 Sobic002G037000 Sobic002G037000 Sobic004G098200--Sobic002G037000 Sobic004G098200--Sobic008G023500 Sobic004G098200--Sobic001G019100 Sobic003G045800 Sobic003G045800 Sobic004G098200--Sobic003G045800 Sobic001G172900 Sobic001G172900 Sobic004G098200--Sobic001G172900 Sobic004G098200--Sobic009G164200 Sobic004G098200--Sobic009G010800 Sobic005G037500 Sobic005G037500 Sobic004G098200--Sobic005G037500 Sobic009G233600--Sobic002G356700 Sobic009G229100 Sobic009G229100 Sobic009G233600--Sobic009G229100 Sobic003G364700 Sobic003G364700 Sobic009G233600--Sobic003G364700 Sobic001G511200 Sobic001G511200 Sobic009G233600--Sobic001G511200 Sobic009G233600--Sobic004G356600 Sobic009G233600--Sobic005G022400 Sobic010G145200 Sobic010G145200 Sobic009G233600--Sobic010G145200 Sobic009G233600--Sobic003G178200 Sobic002G237700 Sobic002G237700 Sobic009G233600--Sobic002G237700 Sobic006G272450--Sobic009G164200 Sobic006G272450--Sobic008G023500 Sobic006G272450--Sobic006G090201 Sobic006G272450--Sobic009G010800 Sobic009G070900 Sobic009G070900 Sobic006G272450--Sobic009G070900 Sobic006G185400 Sobic006G185400 Sobic006G272450--Sobic006G185400 Sobic006G272450--Sobic003G245700 Sobic004G330500 Sobic004G330500 Sobic006G272450--Sobic004G330500 Sobic005G189400 Sobic005G189400 Sobic006G272450--Sobic005G189400 Sobic002G052500--Sobic007G072901 Sobic002G052500--Sobic003G245700 Sobic003G343100 Sobic003G343100 Sobic002G052500--Sobic003G343100 Sobic002G052500--Sobic008G023500 Sobic002G052500--Sobic006G090201 Sobic002G052500--Sobic006G185400 Sobic002G052500--Sobic009G010800 Sobic002G052500--Sobic003G178200 Sobic002G052500--Sobic004G330500 Sobic008G150150 Sobic008G150150 Sobic001G019100--Sobic008G150150 Sobic003G335800 Sobic003G335800 Sobic001G019100--Sobic003G335800 Sobic001G019100--Sobic002G037000 Sobic001G019100--Sobic005G037500 Sobic010G275550 Sobic010G275550 Sobic001G019100--Sobic010G275550 Sobic001G019100--Sobic001G172900 Sobic001G019100--Sobic006G185400 Sobic001G019100--Sobic008G023500 Sobic001G019100--Sobic004G330500 Sobic009G010800--Sobic006G185400 Sobic009G010800--Sobic004G330500 Sobic009G010800--Sobic005G189400 Sobic009G010800--Sobic001G361500 Sobic002G205201 Sobic002G205201 Sobic009G010800--Sobic002G205201 Sobic006G209100 Sobic006G209100 Sobic009G010800--Sobic006G209100 Sobic007G152200 Sobic007G152200 Sobic009G010800--Sobic007G152200 Sobic009G010800--Sobic008G023500 Sobic009G010800--Sobic003G245700 Sobic006G201200--Sobic006G209100 Sobic006G201200--Sobic001G361500 Sobic006G201200--Sobic006G185400 Sobic006G201200--Sobic004G330500 Sobic006G201200--Sobic010G275550 Sobic006G201200--Sobic005G189400 Sobic006G201200--Sobic009G164200 Sobic006G201200--Sobic007G152200 Sobic006G201200--Sobic002G205201
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.