Gene annotation
Transcriptome id Sobic.001G527500.1
Synonym Sb01g049080
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt A0A1Z5SBR8
Pfam PF00010
Panther DB PTHR11969 PTHR11969:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G01460 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os03g03000.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036738 , Zm00025a000299 , Zm00025a053505
Brachypodium KQK00838 , KQK05832 , KQK23924
Barley HORVU1Hr1G071330.8 , HORVU1Hr1G071330.1 , HORVU1Hr1G071330.3 , HORVU4Hr1G084850.1 , HORVU4Hr1G084850.3 , HORVU4Hr1G084850.2 , HORVU4Hr1G084850.5 , HORVU4Hr1G084850.4 , HORVU1Hr1G071330.2 , HORVU1Hr1G071330.5 , HORVU1Hr1G071330.7 , HORVU1Hr1G071330.4 , HORVU1Hr1G071330.6
Wheat TraesCS6D02G294900 , TraesCS1A02G290800 , TraesCS1A02G290800 , TraesCS5A02G515800 , TraesCS6A02G315700 , TraesCS1B02G300100 , TraesCS4B02G347100 , TraesCS4D02G342000 , TraesCS1D02G289400 , TraesCS1D02G289400 , TraesCS6B02G346100
Populus -


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cDNA sequences
Sobic.001G527500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G227800 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
2 Sobic.010G206700 expressed protein -
3 Sobic.002G140100 expressed protein -
4 Sobic.005G232200 expressed protein -
5 Sobic.001G139600 - -
6 Sobic.003G178200 tetratricopeptide repeat containing protein, putative, expressed -
7 Sobic.003G245700 3-5 exonuclease domain-containing protein, putative, expressed -
8 Sobic.005G022400 GATA zinc finger domain containing protein, expressed -
9 Sobic.004G199000 expressed protein -
10 Sobic.001G261553 - -
11 Sobic.006G090201 - -
12 Sobic.003G343100 expressed protein -
13 Sobic.005G189400 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
14 Sobic.006G185400 - -
15 Sobic.009G229100 expressed protein -
16 Sobic.004G330500 expressed protein -
17 Sobic.008G023500 expressed protein -
18 Sobic.002G218200 protein kinase domain containing protein, expressed -
19 Sobic.009G004000 - -
20 Sobic.007G072901 - -


Gene co-expression network
sample Sobic001G527500 Sobic001G527500 Sobic006G227800 Sobic006G227800 Sobic001G527500--Sobic006G227800 Sobic010G206700 Sobic010G206700 Sobic001G527500--Sobic010G206700 Sobic002G140100 Sobic002G140100 Sobic001G527500--Sobic002G140100 Sobic005G232200 Sobic005G232200 Sobic001G527500--Sobic005G232200 Sobic001G139600 Sobic001G139600 Sobic001G527500--Sobic001G139600 Sobic003G178200 Sobic003G178200 Sobic001G527500--Sobic003G178200 Sobic003G245700 Sobic003G245700 Sobic001G527500--Sobic003G245700 Sobic005G022400 Sobic005G022400 Sobic001G527500--Sobic005G022400 Sobic004G199000 Sobic004G199000 Sobic001G527500--Sobic004G199000 Sobic006G227800--Sobic002G140100 Sobic006G227800--Sobic001G139600 Sobic002G326050 Sobic002G326050 Sobic006G227800--Sobic002G326050 Sobic001G519300 Sobic001G519300 Sobic006G227800--Sobic001G519300 Sobic002G218200 Sobic002G218200 Sobic006G227800--Sobic002G218200 Sobic006G227800--Sobic005G232200 Sobic001G410800 Sobic001G410800 Sobic006G227800--Sobic001G410800 Sobic001G220200 Sobic001G220200 Sobic006G227800--Sobic001G220200 Sobic010G158100 Sobic010G158100 Sobic006G227800--Sobic010G158100 Sobic010G206700--Sobic001G139600 Sobic010G206700--Sobic002G140100 Sobic006G185400 Sobic006G185400 Sobic010G206700--Sobic006G185400 Sobic004G330500 Sobic004G330500 Sobic010G206700--Sobic004G330500 Sobic005G189400 Sobic005G189400 Sobic010G206700--Sobic005G189400 Sobic010G206700--Sobic005G232200 Sobic001G361500 Sobic001G361500 Sobic010G206700--Sobic001G361500 Sobic002G205201 Sobic002G205201 Sobic010G206700--Sobic002G205201 Sobic007G152200 Sobic007G152200 Sobic010G206700--Sobic007G152200 Sobic002G140100--Sobic001G139600 Sobic002G140100--Sobic002G326050 Sobic002G140100--Sobic005G232200 Sobic002G140100--Sobic006G227800 Sobic002G140100--Sobic010G206700 Sobic002G140100--Sobic010G158100 Sobic002G140100--Sobic002G218200 Sobic002G140100--Sobic001G410800 Sobic001G261553 Sobic001G261553 Sobic002G140100--Sobic001G261553 Sobic005G232200--Sobic001G139600 Sobic005G232200--Sobic002G140100 Sobic005G232200--Sobic010G206700 Sobic005G232200--Sobic002G218200 Sobic004G357066 Sobic004G357066 Sobic005G232200--Sobic004G357066 Sobic005G232200--Sobic006G227800 Sobic005G232200--Sobic001G410800 Sobic005G232200--Sobic010G158100 Sobic005G232200--Sobic001G261553 Sobic001G139600--Sobic005G232200 Sobic001G139600--Sobic002G140100 Sobic001G139600--Sobic002G218200 Sobic001G139600--Sobic010G206700 Sobic001G139600--Sobic010G158100 Sobic001G139600--Sobic001G410800 Sobic001G139600--Sobic002G326050 Sobic001G139600--Sobic001G261553 Sobic001G139600--Sobic006G227800 Sobic003G178200--Sobic003G245700 Sobic003G178200--Sobic005G189400 Sobic003G178200--Sobic004G330500 Sobic003G178200--Sobic006G185400 Sobic008G023500 Sobic008G023500 Sobic003G178200--Sobic008G023500 Sobic006G090201 Sobic006G090201 Sobic003G178200--Sobic006G090201 Sobic003G178200--Sobic007G152200 Sobic003G178200--Sobic001G361500 Sobic003G178200--Sobic002G205201 Sobic003G245700--Sobic003G178200 Sobic003G245700--Sobic005G189400 Sobic003G245700--Sobic006G185400 Sobic003G245700--Sobic004G330500 Sobic003G245700--Sobic008G023500 Sobic003G245700--Sobic006G090201 Sobic003G245700--Sobic002G205201 Sobic003G245700--Sobic007G152200 Sobic003G245700--Sobic001G361500 Sobic005G022400--Sobic008G023500 Sobic009G010800 Sobic009G010800 Sobic005G022400--Sobic009G010800 Sobic007G072901 Sobic007G072901 Sobic005G022400--Sobic007G072901 Sobic005G022400--Sobic003G245700 Sobic005G022400--Sobic007G152200 Sobic005G022400--Sobic005G189400 Sobic005G022400--Sobic004G330500 Sobic005G022400--Sobic006G185400 Sobic005G022400--Sobic006G090201 Sobic009G004000 Sobic009G004000 Sobic004G199000--Sobic009G004000 Sobic004G199000--Sobic001G261553 Sobic010G096801 Sobic010G096801 Sobic004G199000--Sobic010G096801 Sobic004G199000--Sobic001G139600 Sobic004G199000--Sobic010G206700 Sobic002G003900 Sobic002G003900 Sobic004G199000--Sobic002G003900 Sobic004G199000--Sobic004G357066 Sobic004G199000--Sobic005G232200 Sobic001G019100 Sobic001G019100 Sobic004G199000--Sobic001G019100
Octagon: transcription factors


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