Gene annotation
Transcriptome id Sobic.004G313900.1
Synonym ATHDG11, Sb04g034580, EDT1, HDG11
Functional annotation homeobox and START domains containing protein, putative, expressed
UniProt C5XTH9
Pfam PF00046 PF01852
Panther DB PTHR24326 PTHR24326:SF236
NCBI CDD -
KEGG Orthology K09338; homeobox-leucine zipper protein
Gene Ontology GO:0003677; DNA binding GO:0008289lipid binding


Orthologs (automatic annotation)
TAIR AT1G73360 : homeodomain GLABROUS 11
RAP-DB (Rice) LOC_Os06g10600.1 : homeobox and START domains containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a008490 , Zm00025a033058 , Zm00025a049609 , Zm00025a022274 , Zm00025a042486 , Zm00025a003493
Brachypodium PNT67971 , KQJ97974 , PNT69551 , KQK01691 , KQK19067
Barley HORVU6Hr1G079410.22 , HORVU6Hr1G079410.20 , HORVU6Hr1G079410.21 , HORVU6Hr1G079410.19 , HORVU6Hr1G079410.9 , HORVU6Hr1G079410.8 , HORVU6Hr1G079410.3 , HORVU6Hr1G079410.2 , HORVU6Hr1G079410.1 , HORVU6Hr1G079410.7 , HORVU6Hr1G079410.6 , HORVU6Hr1G079410.5 , HORVU6Hr1G079410.4 , HORVU6Hr1G079410.17 , HORVU7Hr1G035230.14 , HORVU7Hr1G035230.15 , HORVU7Hr1G035230.10 , HORVU7Hr1G035230.11 , HORVU7Hr1G035230.12 , HORVU7Hr1G035230.13 , HORVU6Hr1G079410.13 , HORVU6Hr1G079410.12 , HORVU6Hr1G079410.11 , HORVU6Hr1G079410.10 , HORVU6Hr1G079410.16 , HORVU6Hr1G079410.15 , HORVU6Hr1G079410.14 , HORVU1Hr1G050620.6 , HORVU1Hr1G050620.7 , HORVU1Hr1G050620.4 , HORVU1Hr1G050620.5 , HORVU1Hr1G050620.2 , HORVU1Hr1G050620.3 , HORVU1Hr1G050620.1 , HORVU1Hr1G050620.8 , HORVU1Hr1G050620.9 , HORVU1Hr1G050620.14 , HORVU1Hr1G050620.17 , HORVU1Hr1G050620.10 , HORVU1Hr1G050620.11 , HORVU1Hr1G050620.12 , HORVU1Hr1G050620.13 , HORVU1Hr1G050620.21 , HORVU1Hr1G050620.22 , HORVU1Hr1G050620.18 , HORVU6Hr1G079410.18 , HORVU7Hr1G035230.8 , HORVU7Hr1G035230.9 , HORVU7Hr1G035230.6 , HORVU7Hr1G035230.7 , HORVU7Hr1G035230.2 , HORVU7Hr1G035230.3 , HORVU7Hr1G035230.1 , HORVU7Hr1G025440.3
Wheat TraesCS7A02G167900 , TraesCS7D02G168700 , TraesCS6D02G304300 , TraesCS1D02G197300 , TraesCS6B02G354900 , TraesCS6B02G354900 , TraesCS6B02G354900 , TraesCS6A02G324500 , TraesCS1A02G193400 , TraesCS1B02G208400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G058000 OsSCP24 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
2 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
3 Sobic.009G257900 expressed protein -
4 Sobic.001G390400 expressed protein -
5 Sobic.003G366000 DUF623 domain containing protein, expressed -
6 Sobic.005G092700 expressed protein -
7 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
8 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
9 Sobic.004G269100 ATROPGEF7/ROPGEF7, putative, expressed -
10 Sobic.006G241800 receptor kinase, putative, expressed -
11 Sobic.010G023400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
12 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
13 Sobic.010G078700 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
14 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
15 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
16 Sobic.003G041900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
17 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
18 Sobic.004G266800 ZF-HD protein dimerisation region containing protein, expressed -
19 Sobic.006G110850 - -
20 Sobic.010G024500 expressed protein -


Gene co-expression network
sample Sobic004G313900 Sobic004G313900 Sobic006G058000 Sobic006G058000 Sobic004G313900--Sobic006G058000 Sobic004G317200 Sobic004G317200 Sobic004G313900--Sobic004G317200 Sobic009G257900 Sobic009G257900 Sobic004G313900--Sobic009G257900 Sobic001G390400 Sobic001G390400 Sobic004G313900--Sobic001G390400 Sobic003G366000 Sobic003G366000 Sobic004G313900--Sobic003G366000 Sobic005G092700 Sobic005G092700 Sobic004G313900--Sobic005G092700 Sobic004G234500 Sobic004G234500 Sobic004G313900--Sobic004G234500 Sobic004G108400 Sobic004G108400 Sobic004G313900--Sobic004G108400 Sobic004G269100 Sobic004G269100 Sobic004G313900--Sobic004G269100 Sobic007G160300 Sobic007G160300 Sobic006G058000--Sobic007G160300 Sobic010G020600 Sobic010G020600 Sobic006G058000--Sobic010G020600 Sobic010G078700 Sobic010G078700 Sobic006G058000--Sobic010G078700 Sobic010G192500 Sobic010G192500 Sobic006G058000--Sobic010G192500 Sobic006G058000--Sobic004G317200 Sobic003G089300 Sobic003G089300 Sobic006G058000--Sobic003G089300 Sobic006G058000--Sobic001G390400 Sobic001G470200 Sobic001G470200 Sobic006G058000--Sobic001G470200 Sobic008G097700 Sobic008G097700 Sobic006G058000--Sobic008G097700 Sobic004G317200--Sobic010G020600 Sobic004G357000 Sobic004G357000 Sobic004G317200--Sobic004G357000 Sobic004G317200--Sobic001G470200 Sobic004G317200--Sobic003G089300 Sobic004G317200--Sobic001G390400 Sobic006G241800 Sobic006G241800 Sobic004G317200--Sobic006G241800 Sobic007G211200 Sobic007G211200 Sobic004G317200--Sobic007G211200 Sobic004G317200--Sobic007G160300 Sobic004G317200--Sobic006G058000 Sobic009G257900--Sobic004G317200 Sobic009G257900--Sobic004G108400 Sobic009G025400 Sobic009G025400 Sobic009G257900--Sobic009G025400 Sobic005G129600 Sobic005G129600 Sobic009G257900--Sobic005G129600 Sobic009G257900--Sobic004G313900 Sobic004G329000 Sobic004G329000 Sobic009G257900--Sobic004G329000 Sobic009G257900--Sobic001G390400 Sobic009G257900--Sobic004G357000 Sobic004G113900 Sobic004G113900 Sobic009G257900--Sobic004G113900 Sobic001G390400--Sobic003G366000 Sobic005G163400 Sobic005G163400 Sobic001G390400--Sobic005G163400 Sobic006G050900 Sobic006G050900 Sobic001G390400--Sobic006G050900 Sobic002G050700 Sobic002G050700 Sobic001G390400--Sobic002G050700 Sobic001G390400--Sobic010G192500 Sobic001G390400--Sobic004G317200 Sobic002G319300 Sobic002G319300 Sobic001G390400--Sobic002G319300 Sobic010G024500 Sobic010G024500 Sobic001G390400--Sobic010G024500 Sobic006G142500 Sobic006G142500 Sobic001G390400--Sobic006G142500 Sobic006G110850 Sobic006G110850 Sobic003G366000--Sobic006G110850 Sobic006G187000 Sobic006G187000 Sobic003G366000--Sobic006G187000 Sobic009G060800 Sobic009G060800 Sobic003G366000--Sobic009G060800 Sobic004G302700 Sobic004G302700 Sobic003G366000--Sobic004G302700 Sobic003G366000--Sobic010G192500 Sobic003G366000--Sobic001G390400 Sobic001G160000 Sobic001G160000 Sobic003G366000--Sobic001G160000 Sobic001G046400 Sobic001G046400 Sobic003G366000--Sobic001G046400 Sobic008G190000 Sobic008G190000 Sobic003G366000--Sobic008G190000 Sobic005G092700--Sobic008G190000 Sobic008G042200 Sobic008G042200 Sobic005G092700--Sobic008G042200 Sobic009G200000 Sobic009G200000 Sobic005G092700--Sobic009G200000 Sobic004G115700 Sobic004G115700 Sobic005G092700--Sobic004G115700 Sobic005G092700--Sobic003G366000 Sobic001G381100 Sobic001G381100 Sobic005G092700--Sobic001G381100 Sobic005G092700--Sobic001G160000 Sobic005G092700--Sobic001G390400 Sobic001G075700 Sobic001G075700 Sobic005G092700--Sobic001G075700 Sobic010G023400 Sobic010G023400 Sobic004G234500--Sobic010G023400 Sobic004G234500--Sobic006G142500 Sobic010G086000 Sobic010G086000 Sobic004G234500--Sobic010G086000 Sobic004G246500 Sobic004G246500 Sobic004G234500--Sobic004G246500 Sobic004G267600 Sobic004G267600 Sobic004G234500--Sobic004G267600 Sobic009G127800 Sobic009G127800 Sobic004G234500--Sobic009G127800 Sobic006G274200 Sobic006G274200 Sobic004G234500--Sobic006G274200 Sobic002G027600 Sobic002G027600 Sobic004G234500--Sobic002G027600 Sobic002G317700 Sobic002G317700 Sobic004G234500--Sobic002G317700 Sobic001G054700 Sobic001G054700 Sobic004G108400--Sobic001G054700 Sobic006G221300 Sobic006G221300 Sobic004G108400--Sobic006G221300 Sobic009G143200 Sobic009G143200 Sobic004G108400--Sobic009G143200 Sobic001G452900 Sobic001G452900 Sobic004G108400--Sobic001G452900 Sobic007G008300 Sobic007G008300 Sobic004G108400--Sobic007G008300 Sobic004G108400--Sobic009G127800 Sobic007G162400 Sobic007G162400 Sobic004G108400--Sobic007G162400 Sobic004G108400--Sobic002G050700 Sobic009G101100 Sobic009G101100 Sobic004G108400--Sobic009G101100 Sobic008G052300 Sobic008G052300 Sobic004G269100--Sobic008G052300 Sobic002G259200 Sobic002G259200 Sobic004G269100--Sobic002G259200 Sobic003G251700 Sobic003G251700 Sobic004G269100--Sobic003G251700 Sobic004G269100--Sobic005G092700 Sobic005G153000 Sobic005G153000 Sobic004G269100--Sobic005G153000 Sobic001G461800 Sobic001G461800 Sobic004G269100--Sobic001G461800 Sobic003G250000 Sobic003G250000 Sobic004G269100--Sobic003G250000 Sobic003G222800 Sobic003G222800 Sobic004G269100--Sobic003G222800 Sobic003G055800 Sobic003G055800 Sobic004G269100--Sobic003G055800
Octagon: transcription factors


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