Gene annotation
Transcriptome id Sobic.009G167900.1
Synonym Sb09g022960, CPK13
Functional annotation CAMK_CAMK_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5YZD5
Pfam PF07714 PF13499
Panther DB PTHR24349 PTHR24349:SF145
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G51850 : calcium-dependent protein kinase 13
RAP-DB (Rice) LOC_Os05g39090.1 : CAMK_CAMK_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a028374 , Zm00025a043932 , Zm00025a032358 , Zm00025a039723 , Zm00025a013707 , Zm00025a037757 , Zm00025a033401 , Zm00025a017091 , Zm00025a047650 , Zm00025a033617 , Zm00025a014340 , Zm00025a016615 , Zm00025a032700 , Zm00025a016501 , Zm00025a008488 , Zm00025a056829 , Zm00025a010059 , Zm00025a048434 , Zm00025a008681
Brachypodium KQK12547 , KQK10428 , KQK12836 , KQK15660 , KQK13735 , KQK05824 , KQJ92400 , PNT73937 , KQJ84031 , KQJ89539 , PNT73998 , PNT73999 , KQJ91002 , KQJ84030 , PNT64929 , PNT64928 , KQK15659
Barley HORVU1Hr1G070840.3 , HORVU1Hr1G070840.4 , HORVU7Hr1G056060.1 , HORVU7Hr1G056060.2 , HORVU7Hr1G056060.3 , HORVU2Hr1G124370.11 , HORVU2Hr1G124370.10 , HORVU2Hr1G124370.16 , HORVU2Hr1G124370.15 , HORVU2Hr1G124370.14 , HORVU2Hr1G124370.19 , HORVU2Hr1G124370.18 , HORVU1Hr1G071060.4 , HORVU1Hr1G071060.1 , HORVU1Hr1G071060.3 , HORVU7Hr1G056060.5 , HORVU5Hr1G078430.6 , HORVU1Hr1G071060.2 , HORVU7Hr1G056060.12 , HORVU7Hr1G056060.10 , HORVU7Hr1G056060.11 , HORVU1Hr1G070840.2 , HORVU4Hr1G004540.9 , HORVU4Hr1G004540.8 , HORVU4Hr1G004540.3 , HORVU4Hr1G004540.1 , HORVU1Hr1G070840.1 , HORVU4Hr1G004540.19 , HORVU4Hr1G004540.18 , HORVU4Hr1G004540.13 , HORVU4Hr1G004540.10 , HORVU4Hr1G004540.17 , HORVU4Hr1G004540.15 , HORVU4Hr1G004540.14 , HORVU2Hr1G124370.20 , HORVU2Hr1G096270.8 , HORVU2Hr1G096270.1 , HORVU2Hr1G096270.2 , HORVU2Hr1G096270.3 , HORVU2Hr1G096270.4 , HORVU2Hr1G096270.5 , HORVU2Hr1G096270.6 , HORVU2Hr1G096270.7 , HORVU7Hr1G056060.8 , HORVU7Hr1G056060.9 , HORVU7Hr1G056060.4 , HORVU7Hr1G056060.6 , HORVU7Hr1G056060.7 , HORVU4Hr1G004540.20 , HORVU3Hr1G087600.6 , HORVU3Hr1G087600.7 , HORVU3Hr1G087600.4 , HORVU3Hr1G087600.5 , HORVU3Hr1G087600.2 , HORVU3Hr1G087600.3 , HORVU3Hr1G087600.1 , HORVU3Hr1G087600.8 , HORVU5Hr1G078430.3 , HORVU5Hr1G078430.2 , HORVU5Hr1G078430.5 , HORVU5Hr1G078430.4 , HORVU5Hr1G030810.3 , HORVU5Hr1G030810.2 , HORVU5Hr1G030810.1 , HORVU5Hr1G030810.6 , HORVU5Hr1G030810.5 , HORVU5Hr1G030810.4 , HORVU2Hr1G124370.7 , HORVU2Hr1G124370.9 , HORVU2Hr1G124370.8
Wheat TraesCS3A02G351300 , TraesCS1D02G290700 , TraesCS4A02G283400 , TraesCS2A02G407200 , TraesCS5D02G434500 , TraesCS1A02G292200 , TraesCS1A02G292200 , TraesCS4D02G027600 , TraesCS7B02G165200 , TraesCS2B02G227000 , TraesCS1B02G301600 , TraesCS5D02G305200 , TraesCS5A02G298500 , TraesCS2D02G456400 , TraesCS5D02G475900 , TraesCS5D02G475900 , TraesCS4B02G030100 , TraesCS5D02G434500 , TraesCS4B02G030100 , TraesCS5B02G428400 , TraesCS5B02G428400 , TraesCS3D02G345500 , TraesCS5B02G297700 , TraesCS7A02G267000 , TraesCS2D02G207400 , TraesCS5A02G463100 , TraesCS2B02G478100 , TraesCS5A02G426500 , TraesCS5B02G474500 , TraesCS2D02G404200 , TraesCS2B02G424900 , TraesCS3B02G383800 , TraesCS2A02G199700 , TraesCS7D02G267700
Populus PNS99147 , PNT30816 , PNT30817 , PNT30818 , PNT29869


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
2 Sobic.010G151700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@extra-large G-protein-related, putative, expressed -
3 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
4 Sobic.002G215200 lung seven transmembrane domain containing protein, putative, expressed -
5 Sobic.004G270800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD repeat-containing protein, putative, expressed K03363: cell division cycle 20, cofactor of APC complex
6 Sobic.008G083500 expressed protein -
7 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
8 Sobic.003G201000 WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
10 Sobic.009G101100 patellin protein, putative, expressed -
11 Sobic.006G051000 POLA3 - Putative DNA polymerase alpha complex subunit, expressed K02685: DNA primase large subunit
12 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
13 Sobic.008G129200 MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed K02210: MCM7, DNA replication licensing factor MCM7
14 Sobic.003G369200 POLA1 - Putative DNA polymerase alpha catalytic subunit, expressed K02320: DNA polymerase alpha subunit A
15 Sobic.002G206700 -(PubMedID : 24813726)@CPuORF8 - conserved peptide uORF-containing transcript, expressed K01611: speD, S-adenosylmethionine decarboxylase
16 Sobic.002G383100 expressed protein -
17 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
18 Sobic.009G087000 MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed K02542: DNA replication licensing factor MCM6
19 Sobic.010G079100 lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed -
20 Sobic.010G252700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cullin family domain containing protein, putative, expressed K03349: anaphase-promoting complex subunit 2


Gene co-expression network
sample Sobic009G167900 Sobic009G167900 Sobic003G289800 Sobic003G289800 Sobic009G167900--Sobic003G289800 Sobic010G151700 Sobic010G151700 Sobic009G167900--Sobic010G151700 Sobic003G412800 Sobic003G412800 Sobic009G167900--Sobic003G412800 Sobic002G215200 Sobic002G215200 Sobic009G167900--Sobic002G215200 Sobic004G270800 Sobic004G270800 Sobic009G167900--Sobic004G270800 Sobic008G083500 Sobic008G083500 Sobic009G167900--Sobic008G083500 Sobic003G183700 Sobic003G183700 Sobic009G167900--Sobic003G183700 Sobic003G201000 Sobic003G201000 Sobic009G167900--Sobic003G201000 Sobic003G179500 Sobic003G179500 Sobic009G167900--Sobic003G179500 Sobic002G383100 Sobic002G383100 Sobic003G289800--Sobic002G383100 Sobic009G087000 Sobic009G087000 Sobic003G289800--Sobic009G087000 Sobic001G051300 Sobic001G051300 Sobic003G289800--Sobic001G051300 Sobic003G289800--Sobic003G183700 Sobic003G420300 Sobic003G420300 Sobic003G289800--Sobic003G420300 Sobic003G289800--Sobic003G179500 Sobic005G110535 Sobic005G110535 Sobic003G289800--Sobic005G110535 Sobic003G389100 Sobic003G389100 Sobic003G289800--Sobic003G389100 Sobic010G147700 Sobic010G147700 Sobic003G289800--Sobic010G147700 Sobic010G151700--Sobic008G083500 Sobic006G124400 Sobic006G124400 Sobic010G151700--Sobic006G124400 Sobic010G151700--Sobic003G412800 Sobic006G281400 Sobic006G281400 Sobic010G151700--Sobic006G281400 Sobic010G151700--Sobic003G179500 Sobic010G105400 Sobic010G105400 Sobic010G151700--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic010G151700--Sobic005G144600 Sobic003G423600 Sobic003G423600 Sobic010G151700--Sobic003G423600 Sobic002G296000 Sobic002G296000 Sobic010G151700--Sobic002G296000 Sobic003G412800--Sobic003G179500 Sobic010G079100 Sobic010G079100 Sobic003G412800--Sobic010G079100 Sobic003G412800--Sobic003G289800 Sobic010G103700 Sobic010G103700 Sobic003G412800--Sobic010G103700 Sobic003G412800--Sobic001G051300 Sobic009G119700 Sobic009G119700 Sobic003G412800--Sobic009G119700 Sobic003G412800--Sobic010G151700 Sobic002G351700 Sobic002G351700 Sobic003G412800--Sobic002G351700 Sobic009G189200 Sobic009G189200 Sobic003G412800--Sobic009G189200 Sobic002G215200--Sobic003G289800 Sobic002G215200--Sobic003G183700 Sobic006G051000 Sobic006G051000 Sobic002G215200--Sobic006G051000 Sobic003G369200 Sobic003G369200 Sobic002G215200--Sobic003G369200 Sobic002G215200--Sobic009G087000 Sobic004G243900 Sobic004G243900 Sobic002G215200--Sobic004G243900 Sobic002G215200--Sobic003G201000 Sobic006G195500 Sobic006G195500 Sobic002G215200--Sobic006G195500 Sobic003G318900 Sobic003G318900 Sobic002G215200--Sobic003G318900 Sobic004G119700 Sobic004G119700 Sobic004G270800--Sobic004G119700 Sobic004G270800--Sobic009G087000 Sobic004G270800--Sobic003G183700 Sobic004G270800--Sobic005G110535 Sobic004G270800--Sobic010G147700 Sobic004G270800--Sobic003G369200 Sobic004G270800--Sobic006G051000 Sobic004G270800--Sobic006G195500 Sobic008G129200 Sobic008G129200 Sobic004G270800--Sobic008G129200 Sobic008G083500--Sobic002G296000 Sobic008G083500--Sobic003G420300 Sobic010G024500 Sobic010G024500 Sobic008G083500--Sobic010G024500 Sobic006G105600 Sobic006G105600 Sobic008G083500--Sobic006G105600 Sobic001G304800 Sobic001G304800 Sobic008G083500--Sobic001G304800 Sobic009G101100 Sobic009G101100 Sobic008G083500--Sobic009G101100 Sobic002G286700 Sobic002G286700 Sobic008G083500--Sobic002G286700 Sobic003G292700 Sobic003G292700 Sobic008G083500--Sobic003G292700 Sobic001G054700 Sobic001G054700 Sobic008G083500--Sobic001G054700 Sobic003G183700--Sobic006G051000 Sobic003G183700--Sobic009G087000 Sobic003G183700--Sobic006G195500 Sobic003G183700--Sobic010G103700 Sobic003G183700--Sobic003G179500 Sobic003G183700--Sobic005G110535 Sobic003G183700--Sobic008G129200 Sobic004G321400 Sobic004G321400 Sobic003G183700--Sobic004G321400 Sobic003G183700--Sobic010G147700 Sobic003G201000--Sobic010G147700 Sobic003G201000--Sobic003G369200 Sobic003G201000--Sobic009G087000 Sobic003G444300 Sobic003G444300 Sobic003G201000--Sobic003G444300 Sobic003G201000--Sobic005G144600 Sobic010G054600 Sobic010G054600 Sobic003G201000--Sobic010G054600 Sobic006G029300 Sobic006G029300 Sobic003G201000--Sobic006G029300 Sobic002G290000 Sobic002G290000 Sobic003G201000--Sobic002G290000 Sobic003G201000--Sobic005G110535 Sobic003G179500--Sobic003G183700 Sobic003G179500--Sobic010G103700 Sobic003G179500--Sobic010G105400 Sobic003G179500--Sobic005G144600 Sobic003G179500--Sobic010G147700 Sobic003G179500--Sobic009G087000 Sobic003G179500--Sobic005G110535 Sobic006G116500 Sobic006G116500 Sobic003G179500--Sobic006G116500 Sobic004G047100 Sobic004G047100 Sobic003G179500--Sobic004G047100
Octagon: transcription factors


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