Gene annotation
Transcriptome id Sobic.006G129000.1
Synonym Sb06g020900
Functional annotation ATP/GTP binding protein, putative, expressed
UniProt C5YBB6
Pfam -
Panther DB PTHR33704 PTHR33704:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G10010 : -
RAP-DB (Rice) LOC_Os04g56590.1 : ATP/GTP binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a023701 , Zm00025a034234 , Zm00025a004357 , Zm00025a010919 , Zm00025a056358
Brachypodium PNT62061 , PNT62062 , PNT62063 , PNT62064 , PNT62065 , PNT62066 , KQJ85107
Barley -
Wheat TraesCS1A02G369300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G312400 dymeclin, putative, expressed -
2 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
3 Sobic.004G056400 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
4 Sobic.003G152700 craniofacial development protein 1, putative, expressed -
5 Sobic.001G418000 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
6 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
7 Sobic.003G326800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
8 Sobic.001G505500 ankyrin repeat domain containing protein, expressed -
9 Sobic.004G075100 - -
10 Sobic.003G410400 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.001G038200 leaf senescence related protein, putative, expressed -
12 Sobic.003G096000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
13 Sobic.002G159900 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
14 Sobic.004G166500 N-carbamoylputrescine amidohydrolase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@N-carbamoylputrescine amidase, putative, expressed K12251: N-carbamoylputrescine amidase
15 Sobic.002G043300 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
16 Sobic.003G319000 universal stress protein domain containing protein, putative, expressed -
17 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase
18 Sobic.002G329700 ribosomal protein L28 protein, putative, expressed K02902: RP-L28, MRPL28, large subunit ribosomal protein L28
19 Sobic.003G128200 expressed protein -
20 Sobic.005G080900 expressed protein -


Gene co-expression network
sample Sobic006G129000 Sobic006G129000 Sobic003G312400 Sobic003G312400 Sobic006G129000--Sobic003G312400 Sobic003G252900 Sobic003G252900 Sobic006G129000--Sobic003G252900 Sobic004G056400 Sobic004G056400 Sobic006G129000--Sobic004G056400 Sobic003G152700 Sobic003G152700 Sobic006G129000--Sobic003G152700 Sobic001G418000 Sobic001G418000 Sobic006G129000--Sobic001G418000 Sobic010G265900 Sobic010G265900 Sobic006G129000--Sobic010G265900 Sobic003G326800 Sobic003G326800 Sobic006G129000--Sobic003G326800 Sobic001G505500 Sobic001G505500 Sobic006G129000--Sobic001G505500 Sobic004G075100 Sobic004G075100 Sobic006G129000--Sobic004G075100 Sobic003G312400--Sobic003G252900 Sobic003G410400 Sobic003G410400 Sobic003G312400--Sobic003G410400 Sobic003G319000 Sobic003G319000 Sobic003G312400--Sobic003G319000 Sobic004G168300 Sobic004G168300 Sobic003G312400--Sobic004G168300 Sobic003G092700 Sobic003G092700 Sobic003G312400--Sobic003G092700 Sobic010G168900 Sobic010G168900 Sobic003G312400--Sobic010G168900 Sobic003G312400--Sobic006G129000 Sobic010G059700 Sobic010G059700 Sobic003G312400--Sobic010G059700 Sobic002G297600 Sobic002G297600 Sobic003G312400--Sobic002G297600 Sobic008G058700 Sobic008G058700 Sobic003G252900--Sobic008G058700 Sobic003G252900--Sobic003G312400 Sobic003G126800 Sobic003G126800 Sobic003G252900--Sobic003G126800 Sobic003G252900--Sobic003G319000 Sobic003G252900--Sobic003G410400 Sobic001G294600 Sobic001G294600 Sobic003G252900--Sobic001G294600 Sobic003G252900--Sobic006G129000 Sobic009G182200 Sobic009G182200 Sobic003G252900--Sobic009G182200 Sobic010G088300 Sobic010G088300 Sobic003G252900--Sobic010G088300 Sobic003G096000 Sobic003G096000 Sobic004G056400--Sobic003G096000 Sobic010G101600 Sobic010G101600 Sobic004G056400--Sobic010G101600 Sobic009G117200 Sobic009G117200 Sobic004G056400--Sobic009G117200 Sobic010G089500 Sobic010G089500 Sobic004G056400--Sobic010G089500 Sobic001G370700 Sobic001G370700 Sobic004G056400--Sobic001G370700 Sobic001G350600 Sobic001G350600 Sobic004G056400--Sobic001G350600 Sobic006G013000 Sobic006G013000 Sobic004G056400--Sobic006G013000 Sobic002G309700 Sobic002G309700 Sobic004G056400--Sobic002G309700 Sobic001G030300 Sobic001G030300 Sobic004G056400--Sobic001G030300 Sobic003G128200 Sobic003G128200 Sobic003G152700--Sobic003G128200 Sobic002G184900 Sobic002G184900 Sobic003G152700--Sobic002G184900 Sobic003G358300 Sobic003G358300 Sobic003G152700--Sobic003G358300 Sobic004G166500 Sobic004G166500 Sobic003G152700--Sobic004G166500 Sobic001G402600 Sobic001G402600 Sobic003G152700--Sobic001G402600 Sobic003G424800 Sobic003G424800 Sobic003G152700--Sobic003G424800 Sobic003G152700--Sobic006G129000 Sobic007G140200 Sobic007G140200 Sobic003G152700--Sobic007G140200 Sobic006G239300 Sobic006G239300 Sobic003G152700--Sobic006G239300 Sobic001G196100 Sobic001G196100 Sobic001G418000--Sobic001G196100 Sobic001G418000--Sobic003G096000 Sobic001G418000--Sobic010G089500 Sobic002G159900 Sobic002G159900 Sobic001G418000--Sobic002G159900 Sobic007G044400 Sobic007G044400 Sobic001G418000--Sobic007G044400 Sobic006G156000 Sobic006G156000 Sobic001G418000--Sobic006G156000 Sobic001G418000--Sobic003G319000 Sobic003G084300 Sobic003G084300 Sobic001G418000--Sobic003G084300 Sobic002G128800 Sobic002G128800 Sobic001G418000--Sobic002G128800 Sobic006G200000 Sobic006G200000 Sobic010G265900--Sobic006G200000 Sobic005G120500 Sobic005G120500 Sobic010G265900--Sobic005G120500 Sobic006G102900 Sobic006G102900 Sobic010G265900--Sobic006G102900 Sobic005G080900 Sobic005G080900 Sobic010G265900--Sobic005G080900 Sobic010G265900--Sobic003G084300 Sobic009G189200 Sobic009G189200 Sobic010G265900--Sobic009G189200 Sobic006G120700 Sobic006G120700 Sobic010G265900--Sobic006G120700 Sobic001G157800 Sobic001G157800 Sobic010G265900--Sobic001G157800 Sobic004G344500 Sobic004G344500 Sobic010G265900--Sobic004G344500 Sobic003G326800--Sobic003G096000 Sobic004G226500 Sobic004G226500 Sobic003G326800--Sobic004G226500 Sobic003G326800--Sobic004G056400 Sobic002G186900 Sobic002G186900 Sobic003G326800--Sobic002G186900 Sobic003G340700 Sobic003G340700 Sobic003G326800--Sobic003G340700 Sobic006G126000 Sobic006G126000 Sobic003G326800--Sobic006G126000 Sobic007G150000 Sobic007G150000 Sobic003G326800--Sobic007G150000 Sobic003G326800--Sobic010G101600 Sobic009G164700 Sobic009G164700 Sobic003G326800--Sobic009G164700 Sobic004G138800 Sobic004G138800 Sobic001G505500--Sobic004G138800 Sobic001G418900 Sobic001G418900 Sobic001G505500--Sobic001G418900 Sobic007G115100 Sobic007G115100 Sobic001G505500--Sobic007G115100 Sobic007G076300 Sobic007G076300 Sobic001G505500--Sobic007G076300 Sobic007G092100 Sobic007G092100 Sobic001G505500--Sobic007G092100 Sobic001G334300 Sobic001G334300 Sobic001G505500--Sobic001G334300 Sobic001G018800 Sobic001G018800 Sobic001G505500--Sobic001G018800 Sobic009G227400 Sobic009G227400 Sobic001G505500--Sobic009G227400 Sobic001G513500 Sobic001G513500 Sobic001G505500--Sobic001G513500 Sobic003G191500 Sobic003G191500 Sobic004G075100--Sobic003G191500 Sobic002G338250 Sobic002G338250 Sobic004G075100--Sobic002G338250 Sobic009G216800 Sobic009G216800 Sobic004G075100--Sobic009G216800 Sobic002G362000 Sobic002G362000 Sobic004G075100--Sobic002G362000 Sobic009G063900 Sobic009G063900 Sobic004G075100--Sobic009G063900 Sobic001G389900 Sobic001G389900 Sobic004G075100--Sobic001G389900 Sobic003G357100 Sobic003G357100 Sobic004G075100--Sobic003G357100 Sobic004G259600 Sobic004G259600 Sobic004G075100--Sobic004G259600 Sobic004G075100--Sobic006G239300
Octagon: transcription factors


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