Gene annotation
Transcriptome id Sobic.003G319000.1
Synonym Sb03g036580
Functional annotation universal stress protein domain containing protein, putative, expressed
UniProt C5XLR6
Pfam PF00582
Panther DB PTHR31966 PTHR31966:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR AT1G11360 : Adenine nucleotide alpha hydrolases-like superfamily protein
RAP-DB (Rice) LOC_Os01g57450.1 : universal stress protein domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039880 , Zm00025a048340 , Zm00025a027264 , Zm00025a044141 , Zm00025a014872
Brachypodium KQK15836 , KQK05543
Barley HORVU3Hr1G077000.6 , HORVU3Hr1G077000.5 , HORVU3Hr1G077000.4 , HORVU3Hr1G077000.3 , HORVU3Hr1G077000.2 , HORVU3Hr1G077000.1 , HORVU1Hr1G066100.2 , HORVU1Hr1G066100.3 , HORVU1Hr1G066100.1 , HORVU1Hr1G066100.6 , HORVU1Hr1G066100.7 , HORVU1Hr1G066100.4 , HORVU1Hr1G066100.5
Wheat TraesCS3B02G351300 , TraesCS1A02G321000 , TraesCS1B02G333600 , TraesCS3D02G315900 , TraesCS1D02G321100 , TraesCS3A02G315600
Populus -


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cDNA sequences
Sobic.003G319000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G196100 src homology-3 domain protein 3, putative, expressed -
2 Sobic.003G092700 xylosyltransferase, putative, expressed -
3 Sobic.009G182200 domain of unknown function, DUF250 domain containing protein, expressed -
4 Sobic.001G026600 - -
5 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
6 Sobic.003G312400 dymeclin, putative, expressed -
7 Sobic.001G418000 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
8 Sobic.003G410400 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.003G023500 syntaxin, putative, expressed K08489: syntaxin 16
10 Sobic.001G436100 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
11 Sobic.001G530800 T-complex protein, putative, expressed K09496: T-complex protein 1 subunit delta
12 Sobic.003G348200 Lung seven transmembrane receptor domain containing protein, putative, expressed -
13 Sobic.010G186500 targeting protein for Xklp2, putative, expressed -
14 Sobic.007G044400 MSP domain containing protein, expressed -
15 Sobic.004G031800 expressed protein -
16 Sobic.003G224300 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
17 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
18 Sobic.003G125100 uncharacterized Cys-rich domain containing protein, putative, expressed -
19 Sobic.009G164700 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
20 Sobic.003G353400 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase


Gene co-expression network
sample Sobic003G319000 Sobic003G319000 Sobic001G196100 Sobic001G196100 Sobic003G319000--Sobic001G196100 Sobic003G092700 Sobic003G092700 Sobic003G319000--Sobic003G092700 Sobic009G182200 Sobic009G182200 Sobic003G319000--Sobic009G182200 Sobic001G026600 Sobic001G026600 Sobic003G319000--Sobic001G026600 Sobic003G252900 Sobic003G252900 Sobic003G319000--Sobic003G252900 Sobic003G312400 Sobic003G312400 Sobic003G319000--Sobic003G312400 Sobic001G418000 Sobic001G418000 Sobic003G319000--Sobic001G418000 Sobic003G410400 Sobic003G410400 Sobic003G319000--Sobic003G410400 Sobic003G023500 Sobic003G023500 Sobic003G319000--Sobic003G023500 Sobic001G116000 Sobic001G116000 Sobic001G196100--Sobic001G116000 Sobic007G044400 Sobic007G044400 Sobic001G196100--Sobic007G044400 Sobic001G281900 Sobic001G281900 Sobic001G196100--Sobic001G281900 Sobic001G035400 Sobic001G035400 Sobic001G196100--Sobic001G035400 Sobic001G196100--Sobic001G418000 Sobic002G087000 Sobic002G087000 Sobic001G196100--Sobic002G087000 Sobic001G196100--Sobic003G319000 Sobic003G322300 Sobic003G322300 Sobic001G196100--Sobic003G322300 Sobic001G530800 Sobic001G530800 Sobic001G196100--Sobic001G530800 Sobic003G092700--Sobic003G319000 Sobic003G092700--Sobic003G312400 Sobic002G141700 Sobic002G141700 Sobic003G092700--Sobic002G141700 Sobic001G145500 Sobic001G145500 Sobic003G092700--Sobic001G145500 Sobic001G542900 Sobic001G542900 Sobic003G092700--Sobic001G542900 Sobic004G083000 Sobic004G083000 Sobic003G092700--Sobic004G083000 Sobic006G252200 Sobic006G252200 Sobic003G092700--Sobic006G252200 Sobic010G088300 Sobic010G088300 Sobic003G092700--Sobic010G088300 Sobic002G194800 Sobic002G194800 Sobic003G092700--Sobic002G194800 Sobic009G182200--Sobic003G319000 Sobic009G171100 Sobic009G171100 Sobic009G182200--Sobic009G171100 Sobic003G217100 Sobic003G217100 Sobic009G182200--Sobic003G217100 Sobic003G348200 Sobic003G348200 Sobic009G182200--Sobic003G348200 Sobic010G201388 Sobic010G201388 Sobic009G182200--Sobic010G201388 Sobic001G441000 Sobic001G441000 Sobic009G182200--Sobic001G441000 Sobic004G123000 Sobic004G123000 Sobic009G182200--Sobic004G123000 Sobic003G224300 Sobic003G224300 Sobic009G182200--Sobic003G224300 Sobic006G013000 Sobic006G013000 Sobic009G182200--Sobic006G013000 Sobic001G026600--Sobic001G530800 Sobic001G026600--Sobic007G044400 Sobic010G277000 Sobic010G277000 Sobic001G026600--Sobic010G277000 Sobic001G026600--Sobic001G196100 Sobic001G026600--Sobic001G116000 Sobic008G084100 Sobic008G084100 Sobic001G026600--Sobic008G084100 Sobic001G026600--Sobic003G319000 Sobic002G313600 Sobic002G313600 Sobic001G026600--Sobic002G313600 Sobic001G436100 Sobic001G436100 Sobic001G026600--Sobic001G436100 Sobic008G058700 Sobic008G058700 Sobic003G252900--Sobic008G058700 Sobic003G252900--Sobic003G312400 Sobic003G126800 Sobic003G126800 Sobic003G252900--Sobic003G126800 Sobic003G252900--Sobic003G319000 Sobic003G252900--Sobic003G410400 Sobic001G294600 Sobic001G294600 Sobic003G252900--Sobic001G294600 Sobic006G129000 Sobic006G129000 Sobic003G252900--Sobic006G129000 Sobic003G252900--Sobic009G182200 Sobic003G252900--Sobic010G088300 Sobic003G312400--Sobic003G252900 Sobic003G312400--Sobic003G410400 Sobic003G312400--Sobic003G319000 Sobic004G168300 Sobic004G168300 Sobic003G312400--Sobic004G168300 Sobic003G312400--Sobic003G092700 Sobic010G168900 Sobic010G168900 Sobic003G312400--Sobic010G168900 Sobic003G312400--Sobic006G129000 Sobic010G059700 Sobic010G059700 Sobic003G312400--Sobic010G059700 Sobic002G297600 Sobic002G297600 Sobic003G312400--Sobic002G297600 Sobic001G418000--Sobic001G196100 Sobic003G096000 Sobic003G096000 Sobic001G418000--Sobic003G096000 Sobic010G089500 Sobic010G089500 Sobic001G418000--Sobic010G089500 Sobic002G159900 Sobic002G159900 Sobic001G418000--Sobic002G159900 Sobic001G418000--Sobic007G044400 Sobic006G156000 Sobic006G156000 Sobic001G418000--Sobic006G156000 Sobic001G418000--Sobic003G319000 Sobic003G084300 Sobic003G084300 Sobic001G418000--Sobic003G084300 Sobic002G128800 Sobic002G128800 Sobic001G418000--Sobic002G128800 Sobic003G410400--Sobic008G058700 Sobic003G043400 Sobic003G043400 Sobic003G410400--Sobic003G043400 Sobic003G410400--Sobic003G312400 Sobic009G201800 Sobic009G201800 Sobic003G410400--Sobic009G201800 Sobic003G410400--Sobic003G252900 Sobic003G410400--Sobic003G319000 Sobic003G039200 Sobic003G039200 Sobic003G410400--Sobic003G039200 Sobic003G031200 Sobic003G031200 Sobic003G410400--Sobic003G031200 Sobic004G010700 Sobic004G010700 Sobic003G410400--Sobic004G010700 Sobic004G222600 Sobic004G222600 Sobic003G023500--Sobic004G222600 Sobic003G023500--Sobic003G217100 Sobic002G214900 Sobic002G214900 Sobic003G023500--Sobic002G214900 Sobic001G214200 Sobic001G214200 Sobic003G023500--Sobic001G214200 Sobic001G409900 Sobic001G409900 Sobic003G023500--Sobic001G409900 Sobic009G191600 Sobic009G191600 Sobic003G023500--Sobic009G191600 Sobic006G222400 Sobic006G222400 Sobic003G023500--Sobic006G222400 Sobic004G054300 Sobic004G054300 Sobic003G023500--Sobic004G054300 Sobic002G376500 Sobic002G376500 Sobic003G023500--Sobic002G376500
Octagon: transcription factors


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