Gene annotation
Transcriptome id Sobic.004G166500.1
Synonym NLP1, CPA, ATNLP1, Sb04g021790, CPA;N-carbamoylputrescine amidohydrolase, CPA
Functional annotation N-carbamoylputrescine amidohydrolase (PubMedID : 27325899)
Up-regulated by silicon application under drought stress (PubMedID : 24813726)
N-carbamoylputrescine amidase, putative, expressed
UniProt C5XTG0
Pfam PF00795
Panther DB PTHR23088 PTHR23088:SF26
NCBI CDD KOG0806; Carbon-nitrogen hydrolase
KEGG Orthology K12251; N-carbamoylputrescine amidase
Gene Ontology GO:0016810; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds GO:0006807nitrogen compound metabolic process


Orthologs (automatic annotation)
TAIR AT2G27450 : nitrilase-like protein 1
RAP-DB (Rice) LOC_Os02g33080.1 : N-carbamoylputrescine amidase, putative, expressed
MaizeGDB (Corn) Zm00025a020545
Brachypodium KQJ99737
Barley HORVU5Hr1G006730.3 , HORVU5Hr1G006730.15 , HORVU5Hr1G006730.14 , HORVU5Hr1G006730.13 , HORVU5Hr1G006730.12 , HORVU5Hr1G006730.11 , HORVU5Hr1G006730.10 , HORVU5Hr1G006730.9 , HORVU5Hr1G006730.8 , HORVU5Hr1G006730.7 , HORVU5Hr1G006730.5 , HORVU5Hr1G006730.4 , HORVU5Hr1G006730.2 , HORVU5Hr1G006730.1
Wheat TraesCS5B02G022300 , TraesCS5A02G024500 , TraesCS5A02G024500
Populus -


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cDNA sequences
Sobic.004G166500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G358300 josephin, putative, expressed K11863: ATXN3, Ataxin-3
2 Sobic.001G201100 cytochrome b561, putative, expressed K08360: cytochrome b-561
3 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
4 Sobic.003G368700 COV1, putative, expressed -
5 Sobic.008G130400 prefoldin, putative, expressed -
6 Sobic.002G218000 expressed protein K13528: mediator of RNA polymerase II transcription subunit 20
7 Sobic.006G239300 thiamine-repressible mitochondrial transport protein THI74, putative, expressed K15289: solute carrier family 35, member F5
8 Sobic.001G505500 ankyrin repeat domain containing protein, expressed -
9 Sobic.009G070200 Der1-like family domain containing protein, expressed K13989: Derlin-2/3
10 Sobic.010G257100 CGMC_MAPKCMGC_2.11 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
11 Sobic.010G238700 dynamin family protein, putative, expressed K12483: EH domain-containing protein 1
12 Sobic.006G143500 expressed protein -
13 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
14 Sobic.002G263800 peptidase, T1 family, putative, expressed K02736: 20S proteasome subunit beta 7
15 Sobic.009G008600 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
16 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
17 Sobic.004G297300 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05609: UCHL3, ubiquitin carboxyl-terminal hydrolase L3
18 Sobic.008G132700 ATP-grasp domain containing protein, expressed K01648: ATP citrate (pro-S)-lyase
19 Sobic.009G232000 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
20 Sobic.001G517600 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e


Gene co-expression network
sample Sobic004G166500 Sobic004G166500 Sobic003G358300 Sobic003G358300 Sobic004G166500--Sobic003G358300 Sobic001G201100 Sobic001G201100 Sobic004G166500--Sobic001G201100 Sobic001G066700 Sobic001G066700 Sobic004G166500--Sobic001G066700 Sobic003G368700 Sobic003G368700 Sobic004G166500--Sobic003G368700 Sobic008G130400 Sobic008G130400 Sobic004G166500--Sobic008G130400 Sobic002G218000 Sobic002G218000 Sobic004G166500--Sobic002G218000 Sobic006G239300 Sobic006G239300 Sobic004G166500--Sobic006G239300 Sobic001G505500 Sobic001G505500 Sobic004G166500--Sobic001G505500 Sobic009G070200 Sobic009G070200 Sobic004G166500--Sobic009G070200 Sobic003G358300--Sobic001G066700 Sobic006G231700 Sobic006G231700 Sobic003G358300--Sobic006G231700 Sobic005G111100 Sobic005G111100 Sobic003G358300--Sobic005G111100 Sobic002G044000 Sobic002G044000 Sobic003G358300--Sobic002G044000 Sobic004G032000 Sobic004G032000 Sobic003G358300--Sobic004G032000 Sobic003G358300--Sobic004G166500 Sobic002G386300 Sobic002G386300 Sobic003G358300--Sobic002G386300 Sobic007G163700 Sobic007G163700 Sobic003G358300--Sobic007G163700 Sobic009G191200 Sobic009G191200 Sobic003G358300--Sobic009G191200 Sobic003G233500 Sobic003G233500 Sobic001G201100--Sobic003G233500 Sobic001G201100--Sobic004G166500 Sobic001G201100--Sobic001G505500 Sobic010G106200 Sobic010G106200 Sobic001G201100--Sobic010G106200 Sobic001G340500 Sobic001G340500 Sobic001G201100--Sobic001G340500 Sobic006G137100 Sobic006G137100 Sobic001G201100--Sobic006G137100 Sobic010G266300 Sobic010G266300 Sobic001G201100--Sobic010G266300 Sobic007G078100 Sobic007G078100 Sobic001G201100--Sobic007G078100 Sobic010G153100 Sobic010G153100 Sobic001G201100--Sobic010G153100 Sobic001G066700--Sobic003G358300 Sobic003G403400 Sobic003G403400 Sobic001G066700--Sobic003G403400 Sobic001G066700--Sobic002G218000 Sobic001G066700--Sobic005G111100 Sobic009G191600 Sobic009G191600 Sobic001G066700--Sobic009G191600 Sobic001G066700--Sobic010G266300 Sobic001G066700--Sobic003G233500 Sobic010G225300 Sobic010G225300 Sobic001G066700--Sobic010G225300 Sobic001G066700--Sobic009G070200 Sobic003G368700--Sobic004G166500 Sobic009G220100 Sobic009G220100 Sobic003G368700--Sobic009G220100 Sobic003G368700--Sobic001G505500 Sobic008G132700 Sobic008G132700 Sobic003G368700--Sobic008G132700 Sobic003G368700--Sobic003G358300 Sobic006G236500 Sobic006G236500 Sobic003G368700--Sobic006G236500 Sobic002G309400 Sobic002G309400 Sobic003G368700--Sobic002G309400 Sobic003G368700--Sobic010G106200 Sobic010G238700 Sobic010G238700 Sobic003G368700--Sobic010G238700 Sobic002G263800 Sobic002G263800 Sobic008G130400--Sobic002G263800 Sobic009G232000 Sobic009G232000 Sobic008G130400--Sobic009G232000 Sobic008G130400--Sobic008G132700 Sobic001G513500 Sobic001G513500 Sobic008G130400--Sobic001G513500 Sobic001G418900 Sobic001G418900 Sobic008G130400--Sobic001G418900 Sobic001G483100 Sobic001G483100 Sobic008G130400--Sobic001G483100 Sobic004G310300 Sobic004G310300 Sobic008G130400--Sobic004G310300 Sobic006G138100 Sobic006G138100 Sobic008G130400--Sobic006G138100 Sobic004G224900 Sobic004G224900 Sobic008G130400--Sobic004G224900 Sobic009G180000 Sobic009G180000 Sobic002G218000--Sobic009G180000 Sobic006G141500 Sobic006G141500 Sobic002G218000--Sobic006G141500 Sobic003G249800 Sobic003G249800 Sobic002G218000--Sobic003G249800 Sobic010G204500 Sobic010G204500 Sobic002G218000--Sobic010G204500 Sobic002G218000--Sobic005G111100 Sobic002G218000--Sobic001G066700 Sobic002G218000--Sobic010G106200 Sobic010G243200 Sobic010G243200 Sobic002G218000--Sobic010G243200 Sobic002G330000 Sobic002G330000 Sobic002G218000--Sobic002G330000 Sobic010G262300 Sobic010G262300 Sobic006G239300--Sobic010G262300 Sobic004G123000 Sobic004G123000 Sobic006G239300--Sobic004G123000 Sobic006G239300--Sobic010G153100 Sobic006G239300--Sobic003G358300 Sobic006G239300--Sobic001G066700 Sobic001G389900 Sobic001G389900 Sobic006G239300--Sobic001G389900 Sobic006G062800 Sobic006G062800 Sobic006G239300--Sobic006G062800 Sobic003G072300 Sobic003G072300 Sobic006G239300--Sobic003G072300 Sobic002G362000 Sobic002G362000 Sobic006G239300--Sobic002G362000 Sobic004G138800 Sobic004G138800 Sobic001G505500--Sobic004G138800 Sobic001G505500--Sobic001G418900 Sobic007G115100 Sobic007G115100 Sobic001G505500--Sobic007G115100 Sobic007G076300 Sobic007G076300 Sobic001G505500--Sobic007G076300 Sobic007G092100 Sobic007G092100 Sobic001G505500--Sobic007G092100 Sobic001G334300 Sobic001G334300 Sobic001G505500--Sobic001G334300 Sobic001G018800 Sobic001G018800 Sobic001G505500--Sobic001G018800 Sobic009G227400 Sobic009G227400 Sobic001G505500--Sobic009G227400 Sobic001G505500--Sobic001G513500 Sobic009G070200--Sobic010G266300 Sobic009G070200--Sobic001G066700 Sobic009G070200--Sobic002G044000 Sobic008G134900 Sobic008G134900 Sobic009G070200--Sobic008G134900 Sobic002G261900 Sobic002G261900 Sobic009G070200--Sobic002G261900 Sobic009G070200--Sobic003G358300 Sobic009G120100 Sobic009G120100 Sobic009G070200--Sobic009G120100 Sobic003G043400 Sobic003G043400 Sobic009G070200--Sobic003G043400 Sobic007G152400 Sobic007G152400 Sobic009G070200--Sobic007G152400
Octagon: transcription factors


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