Gene annotation
Transcriptome id Sobic.001G201100.1
Synonym Sb01g017730, ACYB-2
Functional annotation cytochrome b561, putative, expressed
UniProt C5WWD4
Pfam PF03188
Panther DB PTHR10106 PTHR10106:SF18
NCBI CDD KOG1619; Cytochrome b
KEGG Orthology K08360; cytochrome b-561
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G25570 : Cytochrome b561/ferric reductase transmembrane protein family
RAP-DB (Rice) LOC_Os10g36030.1 : cytochrome b561, putative, expressed
MaizeGDB (Corn) Zm00025a006399
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G233500 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
2 Sobic.004G166500 N-carbamoylputrescine amidohydrolase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@N-carbamoylputrescine amidase, putative, expressed K12251: N-carbamoylputrescine amidase
3 Sobic.001G505500 ankyrin repeat domain containing protein, expressed -
4 Sobic.010G106200 signal recognition particle 9 kDa protein, putative, expressed K03109: signal recognition particle subunit SRP9
5 Sobic.001G340500 LSM domain containing protein, expressed K11099: SNRPG, small nuclear ribonucleoprotein G
6 Sobic.006G137100 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae
7 Sobic.010G266300 translocon-associated protein subunit alpha precursor, putative, expressed K13249: translocon-associated protein subunit alpha
8 Sobic.007G078100 UPF0041 domain containing protein, putative, expressed -
9 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
10 Sobic.004G069200 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
11 Sobic.001G403500 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
12 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
13 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
14 Sobic.002G049300 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
15 Sobic.010G154700 - -
16 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
17 Sobic.007G009100 dehydrogenase, putative, expressed -
18 Sobic.002G056200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
19 Sobic.010G257100 CGMC_MAPKCMGC_2.11 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
20 Sobic.003G072300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)


Gene co-expression network
sample Sobic001G201100 Sobic001G201100 Sobic003G233500 Sobic003G233500 Sobic001G201100--Sobic003G233500 Sobic004G166500 Sobic004G166500 Sobic001G201100--Sobic004G166500 Sobic001G505500 Sobic001G505500 Sobic001G201100--Sobic001G505500 Sobic010G106200 Sobic010G106200 Sobic001G201100--Sobic010G106200 Sobic001G340500 Sobic001G340500 Sobic001G201100--Sobic001G340500 Sobic006G137100 Sobic006G137100 Sobic001G201100--Sobic006G137100 Sobic010G266300 Sobic010G266300 Sobic001G201100--Sobic010G266300 Sobic007G078100 Sobic007G078100 Sobic001G201100--Sobic007G078100 Sobic010G153100 Sobic010G153100 Sobic001G201100--Sobic010G153100 Sobic003G072300 Sobic003G072300 Sobic003G233500--Sobic003G072300 Sobic001G403500 Sobic001G403500 Sobic003G233500--Sobic001G403500 Sobic002G135200 Sobic002G135200 Sobic003G233500--Sobic002G135200 Sobic004G198400 Sobic004G198400 Sobic003G233500--Sobic004G198400 Sobic002G081600 Sobic002G081600 Sobic003G233500--Sobic002G081600 Sobic006G213000 Sobic006G213000 Sobic003G233500--Sobic006G213000 Sobic010G204500 Sobic010G204500 Sobic003G233500--Sobic010G204500 Sobic002G056200 Sobic002G056200 Sobic003G233500--Sobic002G056200 Sobic002G379500 Sobic002G379500 Sobic003G233500--Sobic002G379500 Sobic003G358300 Sobic003G358300 Sobic004G166500--Sobic003G358300 Sobic004G166500--Sobic001G201100 Sobic001G066700 Sobic001G066700 Sobic004G166500--Sobic001G066700 Sobic003G368700 Sobic003G368700 Sobic004G166500--Sobic003G368700 Sobic008G130400 Sobic008G130400 Sobic004G166500--Sobic008G130400 Sobic002G218000 Sobic002G218000 Sobic004G166500--Sobic002G218000 Sobic006G239300 Sobic006G239300 Sobic004G166500--Sobic006G239300 Sobic004G166500--Sobic001G505500 Sobic009G070200 Sobic009G070200 Sobic004G166500--Sobic009G070200 Sobic004G138800 Sobic004G138800 Sobic001G505500--Sobic004G138800 Sobic001G418900 Sobic001G418900 Sobic001G505500--Sobic001G418900 Sobic007G115100 Sobic007G115100 Sobic001G505500--Sobic007G115100 Sobic007G076300 Sobic007G076300 Sobic001G505500--Sobic007G076300 Sobic007G092100 Sobic007G092100 Sobic001G505500--Sobic007G092100 Sobic001G334300 Sobic001G334300 Sobic001G505500--Sobic001G334300 Sobic001G018800 Sobic001G018800 Sobic001G505500--Sobic001G018800 Sobic009G227400 Sobic009G227400 Sobic001G505500--Sobic009G227400 Sobic001G513500 Sobic001G513500 Sobic001G505500--Sobic001G513500 Sobic001G084900 Sobic001G084900 Sobic010G106200--Sobic001G084900 Sobic001G175300 Sobic001G175300 Sobic010G106200--Sobic001G175300 Sobic010G106200--Sobic001G403500 Sobic002G049300 Sobic002G049300 Sobic010G106200--Sobic002G049300 Sobic007G190800 Sobic007G190800 Sobic010G106200--Sobic007G190800 Sobic010G106200--Sobic010G204500 Sobic009G022400 Sobic009G022400 Sobic010G106200--Sobic009G022400 Sobic001G377800 Sobic001G377800 Sobic010G106200--Sobic001G377800 Sobic002G286900 Sobic002G286900 Sobic010G106200--Sobic002G286900 Sobic009G166500 Sobic009G166500 Sobic001G340500--Sobic009G166500 Sobic001G340500--Sobic001G018800 Sobic001G340500--Sobic002G081600 Sobic005G110800 Sobic005G110800 Sobic001G340500--Sobic005G110800 Sobic001G340500--Sobic006G137100 Sobic009G163800 Sobic009G163800 Sobic001G340500--Sobic009G163800 Sobic003G346600 Sobic003G346600 Sobic001G340500--Sobic003G346600 Sobic006G147000 Sobic006G147000 Sobic001G340500--Sobic006G147000 Sobic003G018600 Sobic003G018600 Sobic001G340500--Sobic003G018600 Sobic006G137100--Sobic006G213000 Sobic003G387900 Sobic003G387900 Sobic006G137100--Sobic003G387900 Sobic006G137100--Sobic002G056200 Sobic009G050300 Sobic009G050300 Sobic006G137100--Sobic009G050300 Sobic006G137100--Sobic003G346600 Sobic006G137100--Sobic001G403500 Sobic010G060500 Sobic010G060500 Sobic006G137100--Sobic010G060500 Sobic004G008400 Sobic004G008400 Sobic006G137100--Sobic004G008400 Sobic002G047600 Sobic002G047600 Sobic006G137100--Sobic002G047600 Sobic008G134900 Sobic008G134900 Sobic010G266300--Sobic008G134900 Sobic010G266300--Sobic009G070200 Sobic010G266300--Sobic001G066700 Sobic010G266300--Sobic003G233500 Sobic010G008800 Sobic010G008800 Sobic010G266300--Sobic010G008800 Sobic007G152400 Sobic007G152400 Sobic010G266300--Sobic007G152400 Sobic005G111100 Sobic005G111100 Sobic010G266300--Sobic005G111100 Sobic001G224400 Sobic001G224400 Sobic010G266300--Sobic001G224400 Sobic004G204800 Sobic004G204800 Sobic010G266300--Sobic004G204800 Sobic004G276100 Sobic004G276100 Sobic007G078100--Sobic004G276100 Sobic002G257300 Sobic002G257300 Sobic007G078100--Sobic002G257300 Sobic007G161400 Sobic007G161400 Sobic007G078100--Sobic007G161400 Sobic010G154700 Sobic010G154700 Sobic007G078100--Sobic010G154700 Sobic004G272800 Sobic004G272800 Sobic007G078100--Sobic004G272800 Sobic004G051700 Sobic004G051700 Sobic007G078100--Sobic004G051700 Sobic005G188100 Sobic005G188100 Sobic007G078100--Sobic005G188100 Sobic001G132100 Sobic001G132100 Sobic007G078100--Sobic001G132100 Sobic001G048832 Sobic001G048832 Sobic007G078100--Sobic001G048832 Sobic010G153100--Sobic001G084900 Sobic010G153100--Sobic001G224400 Sobic003G155400 Sobic003G155400 Sobic010G153100--Sobic003G155400 Sobic001G445800 Sobic001G445800 Sobic010G153100--Sobic001G445800 Sobic010G153100--Sobic010G154700 Sobic010G213400 Sobic010G213400 Sobic010G153100--Sobic010G213400 Sobic010G153100--Sobic007G115100 Sobic001G067601 Sobic001G067601 Sobic010G153100--Sobic001G067601 Sobic006G141500 Sobic006G141500 Sobic010G153100--Sobic006G141500
Octagon: transcription factors


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