Gene annotation
Transcriptome id Sobic.007G009100.1
Synonym Sb07g000970
Functional annotation dehydrogenase, putative, expressed
UniProt A0A1B6PEV7
Pfam PF13602 PF08240
Panther DB PTHR11695 PTHR11695:SF555
NCBI CDD KOG0022; Alcohol dehydrogenase, class III
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT5G63620 : GroES-like zinc-binding alcohol dehydrogenase family protein
RAP-DB (Rice) LOC_Os08g01760.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a043019 , Zm00025a043018 , Zm00025a040182 , Zm00025a030302
Brachypodium KQJ94807
Barley HORVU7Hr1G077200.1
Wheat TraesCS7A02G322200 , TraesCS7D02G319100 , TraesCS7B02G223100
Populus -


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cDNA sequences
Sobic.007G009100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G078100 UPF0041 domain containing protein, putative, expressed -
2 Sobic.001G201100 cytochrome b561, putative, expressed K08360: cytochrome b-561
3 Sobic.010G080500 SAM dependent carboxyl methyltransferase, putative, expressed -
4 Sobic.004G276100 expressed protein -
5 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -
6 Sobic.004G166500 N-carbamoylputrescine amidohydrolase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@N-carbamoylputrescine amidase, putative, expressed K12251: N-carbamoylputrescine amidase
7 Sobic.002G231600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.010G072300 sucrose synthase(PubMedID : 26616172)@"Sh1(Ortholog in maize:Jiang et al., 2013)"(PubMedID : 31659931)@sucrose synthase, putative, expressed K00695: sucrose synthase
9 Sobic.004G069200 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
10 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
11 Sobic.008G034500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phytosulfokines precursor, putative, expressed -
12 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
13 Sobic.002G263800 peptidase, T1 family, putative, expressed K02736: 20S proteasome subunit beta 7
14 Sobic.008G130400 prefoldin, putative, expressed -
15 Sobic.002G312900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
16 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
17 Sobic.009G082700 serine/threonine-protein kinase receptor precursor, putative, expressed -
18 Sobic.010G106200 signal recognition particle 9 kDa protein, putative, expressed K03109: signal recognition particle subunit SRP9
19 Sobic.009G180000 OsCam1-3 - Calmodulin, expressed K02183: calmodulin
20 Sobic.004G284500 ORM1, putative, expressed -


Gene co-expression network
sample Sobic007G009100 Sobic007G009100 Sobic007G078100 Sobic007G078100 Sobic007G009100--Sobic007G078100 Sobic001G201100 Sobic001G201100 Sobic007G009100--Sobic001G201100 Sobic010G080500 Sobic010G080500 Sobic007G009100--Sobic010G080500 Sobic004G276100 Sobic004G276100 Sobic007G009100--Sobic004G276100 Sobic001G010400 Sobic001G010400 Sobic007G009100--Sobic001G010400 Sobic004G166500 Sobic004G166500 Sobic007G009100--Sobic004G166500 Sobic002G231600 Sobic002G231600 Sobic007G009100--Sobic002G231600 Sobic010G072300 Sobic010G072300 Sobic007G009100--Sobic010G072300 Sobic004G069200 Sobic004G069200 Sobic007G009100--Sobic004G069200 Sobic007G078100--Sobic004G276100 Sobic002G257300 Sobic002G257300 Sobic007G078100--Sobic002G257300 Sobic007G161400 Sobic007G161400 Sobic007G078100--Sobic007G161400 Sobic010G154700 Sobic010G154700 Sobic007G078100--Sobic010G154700 Sobic004G272800 Sobic004G272800 Sobic007G078100--Sobic004G272800 Sobic004G051700 Sobic004G051700 Sobic007G078100--Sobic004G051700 Sobic005G188100 Sobic005G188100 Sobic007G078100--Sobic005G188100 Sobic001G132100 Sobic001G132100 Sobic007G078100--Sobic001G132100 Sobic001G048832 Sobic001G048832 Sobic007G078100--Sobic001G048832 Sobic003G233500 Sobic003G233500 Sobic001G201100--Sobic003G233500 Sobic001G201100--Sobic004G166500 Sobic001G505500 Sobic001G505500 Sobic001G201100--Sobic001G505500 Sobic010G106200 Sobic010G106200 Sobic001G201100--Sobic010G106200 Sobic001G340500 Sobic001G340500 Sobic001G201100--Sobic001G340500 Sobic006G137100 Sobic006G137100 Sobic001G201100--Sobic006G137100 Sobic010G266300 Sobic010G266300 Sobic001G201100--Sobic010G266300 Sobic001G201100--Sobic007G078100 Sobic010G153100 Sobic010G153100 Sobic001G201100--Sobic010G153100 Sobic003G018600 Sobic003G018600 Sobic010G080500--Sobic003G018600 Sobic001G377800 Sobic001G377800 Sobic010G080500--Sobic001G377800 Sobic009G088100 Sobic009G088100 Sobic010G080500--Sobic009G088100 Sobic010G080500--Sobic001G505500 Sobic002G406500 Sobic002G406500 Sobic010G080500--Sobic002G406500 Sobic008G132700 Sobic008G132700 Sobic010G080500--Sobic008G132700 Sobic001G418900 Sobic001G418900 Sobic010G080500--Sobic001G418900 Sobic010G080500--Sobic007G009100 Sobic002G392800 Sobic002G392800 Sobic010G080500--Sobic002G392800 Sobic008G179500 Sobic008G179500 Sobic004G276100--Sobic008G179500 Sobic004G276100--Sobic004G272800 Sobic004G276100--Sobic007G078100 Sobic009G111600 Sobic009G111600 Sobic004G276100--Sobic009G111600 Sobic002G329100 Sobic002G329100 Sobic004G276100--Sobic002G329100 Sobic004G050000 Sobic004G050000 Sobic004G276100--Sobic004G050000 Sobic006G108400 Sobic006G108400 Sobic004G276100--Sobic006G108400 Sobic009G043600 Sobic009G043600 Sobic004G276100--Sobic009G043600 Sobic004G284500 Sobic004G284500 Sobic004G276100--Sobic004G284500 Sobic002G249000 Sobic002G249000 Sobic001G010400--Sobic002G249000 Sobic007G148800 Sobic007G148800 Sobic001G010400--Sobic007G148800 Sobic004G185900 Sobic004G185900 Sobic001G010400--Sobic004G185900 Sobic002G113800 Sobic002G113800 Sobic001G010400--Sobic002G113800 Sobic001G393800 Sobic001G393800 Sobic001G010400--Sobic001G393800 Sobic002G258100 Sobic002G258100 Sobic001G010400--Sobic002G258100 Sobic002G180600 Sobic002G180600 Sobic001G010400--Sobic002G180600 Sobic008G107500 Sobic008G107500 Sobic001G010400--Sobic008G107500 Sobic010G016400 Sobic010G016400 Sobic001G010400--Sobic010G016400 Sobic003G358300 Sobic003G358300 Sobic004G166500--Sobic003G358300 Sobic004G166500--Sobic001G201100 Sobic001G066700 Sobic001G066700 Sobic004G166500--Sobic001G066700 Sobic003G368700 Sobic003G368700 Sobic004G166500--Sobic003G368700 Sobic008G130400 Sobic008G130400 Sobic004G166500--Sobic008G130400 Sobic002G218000 Sobic002G218000 Sobic004G166500--Sobic002G218000 Sobic006G239300 Sobic006G239300 Sobic004G166500--Sobic006G239300 Sobic004G166500--Sobic001G505500 Sobic009G070200 Sobic009G070200 Sobic004G166500--Sobic009G070200 Sobic004G318700 Sobic004G318700 Sobic002G231600--Sobic004G318700 Sobic004G042000 Sobic004G042000 Sobic002G231600--Sobic004G042000 Sobic006G157900 Sobic006G157900 Sobic002G231600--Sobic006G157900 Sobic004G202400 Sobic004G202400 Sobic002G231600--Sobic004G202400 Sobic004G349125 Sobic004G349125 Sobic002G231600--Sobic004G349125 Sobic010G001000 Sobic010G001000 Sobic002G231600--Sobic010G001000 Sobic001G416200 Sobic001G416200 Sobic002G231600--Sobic001G416200 Sobic003G016100 Sobic003G016100 Sobic002G231600--Sobic003G016100 Sobic009G109000 Sobic009G109000 Sobic002G231600--Sobic009G109000 Sobic010G072300--Sobic004G069200 Sobic010G072300--Sobic008G132700 Sobic010G072300--Sobic001G201100 Sobic002G312900 Sobic002G312900 Sobic010G072300--Sobic002G312900 Sobic010G072300--Sobic007G009100 Sobic009G179900 Sobic009G179900 Sobic010G072300--Sobic009G179900 Sobic010G257100 Sobic010G257100 Sobic010G072300--Sobic010G257100 Sobic010G260100 Sobic010G260100 Sobic010G072300--Sobic010G260100 Sobic010G259900 Sobic010G259900 Sobic010G072300--Sobic010G259900 Sobic001G247600 Sobic001G247600 Sobic004G069200--Sobic001G247600 Sobic003G379800 Sobic003G379800 Sobic004G069200--Sobic003G379800 Sobic006G059700 Sobic006G059700 Sobic004G069200--Sobic006G059700 Sobic004G225900 Sobic004G225900 Sobic004G069200--Sobic004G225900 Sobic001G070800 Sobic001G070800 Sobic004G069200--Sobic001G070800 Sobic006G136800 Sobic006G136800 Sobic004G069200--Sobic006G136800 Sobic004G069200--Sobic002G312900 Sobic001G009500 Sobic001G009500 Sobic004G069200--Sobic001G009500 Sobic010G185000 Sobic010G185000 Sobic004G069200--Sobic010G185000
Octagon: transcription factors


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