Gene annotation
Transcriptome id Sobic.003G233500.1
Synonym ADK1, Sb03g029120
Functional annotation adenylate kinase, putative, expressed
UniProt C5XEJ6
Pfam PF05191 PF00406
Panther DB PTHR23359 PTHR23359:SF99
NCBI CDD KOG3078; Adenylate kinase
KEGG Orthology K00939; adk, adenylate kinase
Gene Ontology GO:0004017; adenylate kinase activity GO:0006139nucleobase-containing compound metabolic process GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT5G63400 : adenylate kinase 1
RAP-DB (Rice) LOC_Os11g20790.1 : adenylate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a015261 , Zm00025a024975 , Zm00025a028294 , Zm00025a054556 , Zm00025a025447 , Zm00025a022802
Brachypodium KQJ91767
Barley HORVU7Hr1G090950.2 , HORVU7Hr1G090950.3 , HORVU7Hr1G090950.1
Wheat TraesCS7A02G382500 , TraesCS5B02G111400 , TraesCS7D02G378900 , TraesCS7B02G285200 , TraesCS5D02G118800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G233500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G072300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
2 Sobic.001G403500 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
3 Sobic.002G135200 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
4 Sobic.004G198400 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
5 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
6 Sobic.006G213000 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
7 Sobic.010G204500 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
8 Sobic.002G056200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
9 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
10 Sobic.006G137100 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae
11 Sobic.001G016400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
12 Sobic.003G280700 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
13 Sobic.001G436200 S10/S20 domain containing ribosomal protein, putative, expressed K02969: RP-S20e, small subunit ribosomal protein S20e
14 Sobic.009G101700 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
15 Sobic.002G047600 60S ribosomal protein L15, putative, expressed K02877: RP-L15e, large subunit ribosomal protein L15e
16 Sobic.002G374900 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
17 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
18 Sobic.010G154700 - -
19 Sobic.009G242400 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
20 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e


Gene co-expression network
sample Sobic003G233500 Sobic003G233500 Sobic003G072300 Sobic003G072300 Sobic003G233500--Sobic003G072300 Sobic001G403500 Sobic001G403500 Sobic003G233500--Sobic001G403500 Sobic002G135200 Sobic002G135200 Sobic003G233500--Sobic002G135200 Sobic004G198400 Sobic004G198400 Sobic003G233500--Sobic004G198400 Sobic002G081600 Sobic002G081600 Sobic003G233500--Sobic002G081600 Sobic006G213000 Sobic006G213000 Sobic003G233500--Sobic006G213000 Sobic010G204500 Sobic010G204500 Sobic003G233500--Sobic010G204500 Sobic002G056200 Sobic002G056200 Sobic003G233500--Sobic002G056200 Sobic002G379500 Sobic002G379500 Sobic003G233500--Sobic002G379500 Sobic003G072300--Sobic002G081600 Sobic004G205100 Sobic004G205100 Sobic003G072300--Sobic004G205100 Sobic002G187500 Sobic002G187500 Sobic003G072300--Sobic002G187500 Sobic003G209000 Sobic003G209000 Sobic003G072300--Sobic003G209000 Sobic002G190900 Sobic002G190900 Sobic003G072300--Sobic002G190900 Sobic003G072300--Sobic006G213000 Sobic003G072300--Sobic010G204500 Sobic003G155400 Sobic003G155400 Sobic003G072300--Sobic003G155400 Sobic003G072300--Sobic002G379500 Sobic009G050300 Sobic009G050300 Sobic001G403500--Sobic009G050300 Sobic001G403500--Sobic004G198400 Sobic009G215200 Sobic009G215200 Sobic001G403500--Sobic009G215200 Sobic001G403500--Sobic002G379500 Sobic007G197800 Sobic007G197800 Sobic001G403500--Sobic007G197800 Sobic001G403500--Sobic002G081600 Sobic006G137100 Sobic006G137100 Sobic001G403500--Sobic006G137100 Sobic006G116700 Sobic006G116700 Sobic001G403500--Sobic006G116700 Sobic010G206200 Sobic010G206200 Sobic001G403500--Sobic010G206200 Sobic002G135200--Sobic004G198400 Sobic002G374900 Sobic002G374900 Sobic002G135200--Sobic002G374900 Sobic002G135200--Sobic002G379500 Sobic001G011200 Sobic001G011200 Sobic002G135200--Sobic001G011200 Sobic001G175300 Sobic001G175300 Sobic002G135200--Sobic001G175300 Sobic007G018300 Sobic007G018300 Sobic002G135200--Sobic007G018300 Sobic009G223300 Sobic009G223300 Sobic002G135200--Sobic009G223300 Sobic001G091801 Sobic001G091801 Sobic002G135200--Sobic001G091801 Sobic001G533500 Sobic001G533500 Sobic002G135200--Sobic001G533500 Sobic004G198400--Sobic001G403500 Sobic004G198400--Sobic002G379500 Sobic004G198400--Sobic009G050300 Sobic004G198400--Sobic010G206200 Sobic004G280700 Sobic004G280700 Sobic004G198400--Sobic004G280700 Sobic004G198400--Sobic006G213000 Sobic009G054800 Sobic009G054800 Sobic004G198400--Sobic009G054800 Sobic006G221200 Sobic006G221200 Sobic004G198400--Sobic006G221200 Sobic004G198400--Sobic006G137100 Sobic002G081600--Sobic009G050300 Sobic002G081600--Sobic006G116700 Sobic003G346600 Sobic003G346600 Sobic002G081600--Sobic003G346600 Sobic002G081600--Sobic009G215200 Sobic001G374700 Sobic001G374700 Sobic002G081600--Sobic001G374700 Sobic002G200600 Sobic002G200600 Sobic002G081600--Sobic002G200600 Sobic006G067800 Sobic006G067800 Sobic002G081600--Sobic006G067800 Sobic009G166500 Sobic009G166500 Sobic002G081600--Sobic009G166500 Sobic002G081600--Sobic001G403500 Sobic006G213000--Sobic006G137100 Sobic007G053300 Sobic007G053300 Sobic006G213000--Sobic007G053300 Sobic009G076400 Sobic009G076400 Sobic006G213000--Sobic009G076400 Sobic003G387900 Sobic003G387900 Sobic006G213000--Sobic003G387900 Sobic006G213000--Sobic002G379500 Sobic006G213000--Sobic002G056200 Sobic007G019400 Sobic007G019400 Sobic006G213000--Sobic007G019400 Sobic006G213000--Sobic002G081600 Sobic006G213000--Sobic001G403500 Sobic010G204500--Sobic001G403500 Sobic001G483100 Sobic001G483100 Sobic010G204500--Sobic001G483100 Sobic001G016400 Sobic001G016400 Sobic010G204500--Sobic001G016400 Sobic010G204500--Sobic009G050300 Sobic009G180000 Sobic009G180000 Sobic010G204500--Sobic009G180000 Sobic010G204500--Sobic002G056200 Sobic010G204500--Sobic002G081600 Sobic010G204500--Sobic009G215200 Sobic001G018900 Sobic001G018900 Sobic010G204500--Sobic001G018900 Sobic002G056200--Sobic002G379500 Sobic002G056200--Sobic006G137100 Sobic002G056200--Sobic001G403500 Sobic002G056200--Sobic006G213000 Sobic002G056200--Sobic007G019400 Sobic002G056200--Sobic003G387900 Sobic003G109600 Sobic003G109600 Sobic002G056200--Sobic003G109600 Sobic001G436200 Sobic001G436200 Sobic002G056200--Sobic001G436200 Sobic002G047600 Sobic002G047600 Sobic002G056200--Sobic002G047600 Sobic002G379500--Sobic009G050300 Sobic002G379500--Sobic006G213000 Sobic002G379500--Sobic002G056200 Sobic002G379500--Sobic001G403500 Sobic002G379500--Sobic006G116700 Sobic002G379500--Sobic003G109600 Sobic002G379500--Sobic007G197800 Sobic002G379500--Sobic004G198400 Sobic004G008400 Sobic004G008400 Sobic002G379500--Sobic004G008400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.