Gene annotation
Transcriptome id Sobic.009G194200.1
Synonym CSLC12, ATCSLC12
Functional annotation CSLC7 - cellulose synthase-like family C, expressed
UniProt A0A1B6P9G2
Pfam PF13632
Panther DB PTHR32044 PTHR32044:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G07960 : Cellulose-synthase-like C12
RAP-DB (Rice) LOC_Os05g43530.1 : CSLC7 - cellulose synthase-like family C, expressed
MaizeGDB (Corn) Zm00025a044201 , Zm00025a039942
Brachypodium KQK20919 , PNT72924 , KQK05454
Barley -
Wheat TraesCS3A02G299500 , TraesCS1B02G345400 , TraesCS5A02G405700 , TraesCS5A02G405700 , TraesCS1D02G334400 , TraesCS5D02G415700 , TraesCS5D02G415700 , TraesCS1A02G331800 , TraesCS5B02G410400 , TraesCS5B02G410400
Populus PNT49181 , PNT36774


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G008600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLD2 - cellulose synthase-like family D, expressed -
2 Sobic.001G436100 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
3 Sobic.004G261200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G410700 exostosin family domain containing protein, expressed -
5 Sobic.001G061900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
6 Sobic.006G242100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
7 Sobic.004G262600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
8 Sobic.010G101400 glycosyl transferase 8 domain containing protein, putative, expressed -
9 Sobic.001G038200 leaf senescence related protein, putative, expressed -
10 Sobic.002G360301 - -
11 Sobic.003G353400 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
12 Sobic.006G110000 - -
13 Sobic.001G108400 LRR receptor-like protein kinase, putative, expressed -
14 Sobic.001G321800 OsRhmbd7 - Putative Rhomboid homologue, expressed -
15 Sobic.008G119400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
16 Sobic.004G331900 transmembrane 9 superfamily member, putative, expressed -
17 Sobic.002G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed -
18 Sobic.003G094600 glycosyltransferase protein, putative, expressed -
19 Sobic.003G237800 hydrolase, alpha/beta fold family domain containing protein, expressed -
20 Sobic.003G127100 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic009G194200 Sobic009G194200 Sobic010G008600 Sobic010G008600 Sobic009G194200--Sobic010G008600 Sobic001G436100 Sobic001G436100 Sobic009G194200--Sobic001G436100 Sobic004G261200 Sobic004G261200 Sobic009G194200--Sobic004G261200 Sobic003G410700 Sobic003G410700 Sobic009G194200--Sobic003G410700 Sobic001G061900 Sobic001G061900 Sobic009G194200--Sobic001G061900 Sobic006G242100 Sobic006G242100 Sobic009G194200--Sobic006G242100 Sobic004G262600 Sobic004G262600 Sobic009G194200--Sobic004G262600 Sobic010G101400 Sobic010G101400 Sobic009G194200--Sobic010G101400 Sobic001G038200 Sobic001G038200 Sobic009G194200--Sobic001G038200 Sobic003G127100 Sobic003G127100 Sobic010G008600--Sobic003G127100 Sobic010G008600--Sobic010G101400 Sobic004G264600 Sobic004G264600 Sobic010G008600--Sobic004G264600 Sobic010G030900 Sobic010G030900 Sobic010G008600--Sobic010G030900 Sobic010G008600--Sobic009G194200 Sobic001G063600 Sobic001G063600 Sobic010G008600--Sobic001G063600 Sobic010G008600--Sobic001G061900 Sobic001G476400 Sobic001G476400 Sobic010G008600--Sobic001G476400 Sobic002G372800 Sobic002G372800 Sobic010G008600--Sobic002G372800 Sobic001G116000 Sobic001G116000 Sobic001G436100--Sobic001G116000 Sobic001G196100 Sobic001G196100 Sobic001G436100--Sobic001G196100 Sobic001G436100--Sobic009G194200 Sobic001G026600 Sobic001G026600 Sobic001G436100--Sobic001G026600 Sobic004G331900 Sobic004G331900 Sobic001G436100--Sobic004G331900 Sobic002G075500 Sobic002G075500 Sobic001G436100--Sobic002G075500 Sobic001G313301 Sobic001G313301 Sobic001G436100--Sobic001G313301 Sobic004G333100 Sobic004G333100 Sobic001G436100--Sobic004G333100 Sobic003G319000 Sobic003G319000 Sobic001G436100--Sobic003G319000 Sobic003G144600 Sobic003G144600 Sobic004G261200--Sobic003G144600 Sobic004G278200 Sobic004G278200 Sobic004G261200--Sobic004G278200 Sobic004G261200--Sobic009G194200 Sobic004G261200--Sobic003G410700 Sobic007G180900 Sobic007G180900 Sobic004G261200--Sobic007G180900 Sobic003G293600 Sobic003G293600 Sobic004G261200--Sobic003G293600 Sobic004G261200--Sobic001G063600 Sobic003G032900 Sobic003G032900 Sobic004G261200--Sobic003G032900 Sobic007G166900 Sobic007G166900 Sobic004G261200--Sobic007G166900 Sobic003G410700--Sobic004G262600 Sobic003G410700--Sobic004G261200 Sobic003G410700--Sobic009G194200 Sobic003G389100 Sobic003G389100 Sobic003G410700--Sobic003G389100 Sobic004G296200 Sobic004G296200 Sobic003G410700--Sobic004G296200 Sobic003G094600 Sobic003G094600 Sobic003G410700--Sobic003G094600 Sobic001G440500 Sobic001G440500 Sobic003G410700--Sobic001G440500 Sobic003G223900 Sobic003G223900 Sobic003G410700--Sobic003G223900 Sobic003G410700--Sobic001G436100 Sobic001G316900 Sobic001G316900 Sobic001G061900--Sobic001G316900 Sobic001G061900--Sobic010G008600 Sobic001G061900--Sobic009G194200 Sobic001G321800 Sobic001G321800 Sobic001G061900--Sobic001G321800 Sobic002G068800 Sobic002G068800 Sobic001G061900--Sobic002G068800 Sobic001G515800 Sobic001G515800 Sobic001G061900--Sobic001G515800 Sobic007G223200 Sobic007G223200 Sobic001G061900--Sobic007G223200 Sobic003G424300 Sobic003G424300 Sobic001G061900--Sobic003G424300 Sobic001G217300 Sobic001G217300 Sobic001G061900--Sobic001G217300 Sobic004G172100 Sobic004G172100 Sobic006G242100--Sobic004G172100 Sobic001G294400 Sobic001G294400 Sobic006G242100--Sobic001G294400 Sobic003G095400 Sobic003G095400 Sobic006G242100--Sobic003G095400 Sobic006G242100--Sobic002G372800 Sobic003G353400 Sobic003G353400 Sobic006G242100--Sobic003G353400 Sobic004G111100 Sobic004G111100 Sobic006G242100--Sobic004G111100 Sobic006G242100--Sobic001G038200 Sobic006G242100--Sobic009G194200 Sobic009G220200 Sobic009G220200 Sobic006G242100--Sobic009G220200 Sobic004G262600--Sobic003G410700 Sobic004G262600--Sobic003G223900 Sobic004G262600--Sobic004G261200 Sobic009G188800 Sobic009G188800 Sobic004G262600--Sobic009G188800 Sobic003G399000 Sobic003G399000 Sobic004G262600--Sobic003G399000 Sobic004G262600--Sobic009G194200 Sobic004G262600--Sobic001G217300 Sobic001G139300 Sobic001G139300 Sobic004G262600--Sobic001G139300 Sobic003G017200 Sobic003G017200 Sobic004G262600--Sobic003G017200 Sobic010G101400--Sobic010G008600 Sobic008G119400 Sobic008G119400 Sobic010G101400--Sobic008G119400 Sobic007G216500 Sobic007G216500 Sobic010G101400--Sobic007G216500 Sobic010G101400--Sobic010G030900 Sobic010G101400--Sobic003G127100 Sobic002G113500 Sobic002G113500 Sobic010G101400--Sobic002G113500 Sobic010G101400--Sobic009G194200 Sobic004G257300 Sobic004G257300 Sobic010G101400--Sobic004G257300 Sobic010G101400--Sobic001G321800 Sobic001G038200--Sobic006G242100 Sobic002G279600 Sobic002G279600 Sobic001G038200--Sobic002G279600 Sobic001G038200--Sobic010G008600 Sobic001G038200--Sobic009G194200 Sobic001G038200--Sobic003G095400 Sobic002G159900 Sobic002G159900 Sobic001G038200--Sobic002G159900 Sobic006G129000 Sobic006G129000 Sobic001G038200--Sobic006G129000 Sobic001G038200--Sobic003G319000 Sobic003G312400 Sobic003G312400 Sobic001G038200--Sobic003G312400
Octagon: transcription factors


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