Gene annotation
Transcriptome id Sobic.006G110000.1
Synonym
Functional annotation -
UniProt A0A1B6PLD7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.006G110000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G321800 OsRhmbd7 - Putative Rhomboid homologue, expressed -
2 Sobic.009G170100 DUF640 domain containing protein, putative, expressed -
3 Sobic.001G316900 bZIP family transcription factor, putative, expressed -
4 Sobic.002G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed -
5 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.001G476400 - -
7 Sobic.003G342600 DUF640 domain containing protein, putative, expressed -
8 Sobic.002G043400 erythrocyte binding protein 3, putative, expressed -
9 Sobic.004G273200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
10 Sobic.009G194200 CSLC7 - cellulose synthase-like family C, expressed -
11 Sobic.010G030900 glycosyltransferase, putative, expressed -
12 Sobic.001G050800 galactosyltransferase family protein, putative, expressed -
13 Sobic.006G032200 heavy metal-associated domain containing protein, expressed -
14 Sobic.004G261200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.004G257300 GPI-anchored protein, putative, expressed -
16 Sobic.009G159900 homeodomain protein, putative, expressed -
17 Sobic.003G144200 Homeobox domain containing protein, expressed -
18 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
19 Sobic.001G473900 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
20 Sobic.001G061900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -


Gene co-expression network
sample Sobic006G110000 Sobic006G110000 Sobic001G321800 Sobic001G321800 Sobic006G110000--Sobic001G321800 Sobic009G170100 Sobic009G170100 Sobic006G110000--Sobic009G170100 Sobic001G316900 Sobic001G316900 Sobic006G110000--Sobic001G316900 Sobic002G068800 Sobic002G068800 Sobic006G110000--Sobic002G068800 Sobic001G063600 Sobic001G063600 Sobic006G110000--Sobic001G063600 Sobic001G476400 Sobic001G476400 Sobic006G110000--Sobic001G476400 Sobic003G342600 Sobic003G342600 Sobic006G110000--Sobic003G342600 Sobic002G043400 Sobic002G043400 Sobic006G110000--Sobic002G043400 Sobic004G273200 Sobic004G273200 Sobic006G110000--Sobic004G273200 Sobic006G205600 Sobic006G205600 Sobic001G321800--Sobic006G205600 Sobic004G257300 Sobic004G257300 Sobic001G321800--Sobic004G257300 Sobic001G209800 Sobic001G209800 Sobic001G321800--Sobic001G209800 Sobic010G030900 Sobic010G030900 Sobic001G321800--Sobic010G030900 Sobic001G321800--Sobic001G476400 Sobic001G464900 Sobic001G464900 Sobic001G321800--Sobic001G464900 Sobic007G223200 Sobic007G223200 Sobic001G321800--Sobic007G223200 Sobic001G321800--Sobic006G110000 Sobic001G473900 Sobic001G473900 Sobic001G321800--Sobic001G473900 Sobic006G032200 Sobic006G032200 Sobic009G170100--Sobic006G032200 Sobic004G283300 Sobic004G283300 Sobic009G170100--Sobic004G283300 Sobic001G050800 Sobic001G050800 Sobic009G170100--Sobic001G050800 Sobic004G281200 Sobic004G281200 Sobic009G170100--Sobic004G281200 Sobic001G081600 Sobic001G081600 Sobic009G170100--Sobic001G081600 Sobic009G170100--Sobic001G063600 Sobic009G170100--Sobic003G342600 Sobic002G344700 Sobic002G344700 Sobic009G170100--Sobic002G344700 Sobic010G016500 Sobic010G016500 Sobic009G170100--Sobic010G016500 Sobic003G144200 Sobic003G144200 Sobic001G316900--Sobic003G144200 Sobic001G061900 Sobic001G061900 Sobic001G316900--Sobic001G061900 Sobic003G017200 Sobic003G017200 Sobic001G316900--Sobic003G017200 Sobic001G316900--Sobic009G170100 Sobic001G316900--Sobic006G110000 Sobic001G316900--Sobic002G068800 Sobic001G157400 Sobic001G157400 Sobic001G316900--Sobic001G157400 Sobic009G159900 Sobic009G159900 Sobic001G316900--Sobic009G159900 Sobic009G037800 Sobic009G037800 Sobic001G316900--Sobic009G037800 Sobic002G068800--Sobic001G063600 Sobic002G068800--Sobic001G157400 Sobic002G068800--Sobic001G050800 Sobic002G068800--Sobic009G170100 Sobic002G068800--Sobic001G081600 Sobic002G197600 Sobic002G197600 Sobic002G068800--Sobic002G197600 Sobic010G272101 Sobic010G272101 Sobic002G068800--Sobic010G272101 Sobic002G068800--Sobic001G476400 Sobic002G068800--Sobic004G281200 Sobic001G063600--Sobic001G476400 Sobic005G231700 Sobic005G231700 Sobic001G063600--Sobic005G231700 Sobic010G080400 Sobic010G080400 Sobic001G063600--Sobic010G080400 Sobic008G159100 Sobic008G159100 Sobic001G063600--Sobic008G159100 Sobic001G063600--Sobic009G170100 Sobic003G032900 Sobic003G032900 Sobic001G063600--Sobic003G032900 Sobic001G063600--Sobic002G068800 Sobic001G063600--Sobic001G081600 Sobic001G063600--Sobic004G283300 Sobic001G476400--Sobic001G063600 Sobic001G051600 Sobic001G051600 Sobic001G476400--Sobic001G051600 Sobic001G476400--Sobic001G473900 Sobic010G076600 Sobic010G076600 Sobic001G476400--Sobic010G076600 Sobic001G476400--Sobic001G081600 Sobic001G476400--Sobic010G080400 Sobic006G095600 Sobic006G095600 Sobic001G476400--Sobic006G095600 Sobic001G476400--Sobic004G283300 Sobic001G489600 Sobic001G489600 Sobic001G476400--Sobic001G489600 Sobic003G342600--Sobic009G170100 Sobic010G071700 Sobic010G071700 Sobic003G342600--Sobic010G071700 Sobic003G342600--Sobic006G032200 Sobic003G342600--Sobic001G063600 Sobic003G129400 Sobic003G129400 Sobic003G342600--Sobic003G129400 Sobic003G342600--Sobic009G159900 Sobic009G030200 Sobic009G030200 Sobic003G342600--Sobic009G030200 Sobic003G342600--Sobic003G144200 Sobic003G342600--Sobic001G050800 Sobic004G286600 Sobic004G286600 Sobic002G043400--Sobic004G286600 Sobic002G043400--Sobic001G473900 Sobic002G043400--Sobic001G051600 Sobic002G248100 Sobic002G248100 Sobic002G043400--Sobic002G248100 Sobic002G043400--Sobic001G476400 Sobic002G043400--Sobic001G209800 Sobic002G043400--Sobic006G205600 Sobic002G043400--Sobic006G095600 Sobic007G057100 Sobic007G057100 Sobic002G043400--Sobic007G057100 Sobic004G273200--Sobic002G197600 Sobic002G270700 Sobic002G270700 Sobic004G273200--Sobic002G270700 Sobic004G273200--Sobic009G159900 Sobic004G273200--Sobic001G081600 Sobic004G273200--Sobic004G281200 Sobic004G025000 Sobic004G025000 Sobic004G273200--Sobic004G025000 Sobic004G273200--Sobic002G344700 Sobic004G273200--Sobic001G476400 Sobic003G338900 Sobic003G338900 Sobic004G273200--Sobic003G338900
Octagon: transcription factors


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