Gene annotation
Transcriptome id Sobic.001G316900.2
Synonym Sb01g030770
Functional annotation bZIP family transcription factor, putative, expressed
UniProt A0A1Z5S946
Pfam PF00170
Panther DB PTHR13690 PTHR13690:SF78
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G38900 : Basic-leucine zipper (bZIP) transcription factor family protein
RAP-DB (Rice) LOC_Os10g38820.1 : bZIP family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a053476 , Zm00025a003114 , Zm00025a000364
Brachypodium KQK23875 , KQJ97563
Barley HORVU1Hr1G049310.8 , HORVU1Hr1G049310.9 , HORVU1Hr1G049310.4 , HORVU1Hr1G049310.5 , HORVU1Hr1G049310.6 , HORVU1Hr1G049310.7 , HORVU1Hr1G049310.1 , HORVU1Hr1G049310.2 , HORVU1Hr1G049310.3 , HORVU1Hr1G049310.10 , HORVU1Hr1G049310.11 , HORVU4Hr1G083000.3 , HORVU4Hr1G083000.2 , HORVU4Hr1G083000.1 , HORVU4Hr1G083000.6 , HORVU4Hr1G083000.5 , HORVU4Hr1G083000.4 , HORVU3Hr1G109890.1 , HORVU4Hr1G053410.5 , HORVU4Hr1G053410.4 , HORVU4Hr1G053410.1 , HORVU4Hr1G053410.3 , HORVU4Hr1G053410.2
Wheat TraesCS1D02G191000 , TraesCS1A02G186000 , TraesCS4B02G320400 , TraesCS1B02G193800 , TraesCS4D02G316900 , TraesCS5A02G491600 , TraesCS4D02G316900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G144200 Homeobox domain containing protein, expressed -
2 Sobic.001G061900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
3 Sobic.003G017200 osFTL1 FT-Like1 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
4 Sobic.009G170100 DUF640 domain containing protein, putative, expressed -
5 Sobic.006G110000 - -
6 Sobic.002G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed -
7 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
8 Sobic.009G159900 homeodomain protein, putative, expressed -
9 Sobic.009G037800 phosphoglycerate mutase, putative, expressed -
10 Sobic.001G217300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
11 Sobic.001G050800 galactosyltransferase family protein, putative, expressed -
12 Sobic.001G321800 OsRhmbd7 - Putative Rhomboid homologue, expressed -
13 Sobic.006G032200 heavy metal-associated domain containing protein, expressed -
14 Sobic.001G163300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@zinc finger protein-related, putative, expressed K11968: ariadne-1
15 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.010G233400 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dihydroflavonol-4-reductase, putative, expressed -
17 Sobic.001G075800 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
18 Sobic.004G273200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
19 Sobic.007G223200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
20 Sobic.002G023900 Homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic001G316900 Sobic001G316900 Sobic003G144200 Sobic003G144200 Sobic001G316900--Sobic003G144200 Sobic001G061900 Sobic001G061900 Sobic001G316900--Sobic001G061900 Sobic003G017200 Sobic003G017200 Sobic001G316900--Sobic003G017200 Sobic009G170100 Sobic009G170100 Sobic001G316900--Sobic009G170100 Sobic006G110000 Sobic006G110000 Sobic001G316900--Sobic006G110000 Sobic002G068800 Sobic002G068800 Sobic001G316900--Sobic002G068800 Sobic001G157400 Sobic001G157400 Sobic001G316900--Sobic001G157400 Sobic009G159900 Sobic009G159900 Sobic001G316900--Sobic009G159900 Sobic009G037800 Sobic009G037800 Sobic001G316900--Sobic009G037800 Sobic003G144200--Sobic003G017200 Sobic002G023900 Sobic002G023900 Sobic003G144200--Sobic002G023900 Sobic003G144200--Sobic001G157400 Sobic003G144200--Sobic009G159900 Sobic001G050800 Sobic001G050800 Sobic003G144200--Sobic001G050800 Sobic003G144200--Sobic001G316900 Sobic001G106000 Sobic001G106000 Sobic003G144200--Sobic001G106000 Sobic003G144200--Sobic009G170100 Sobic007G153001 Sobic007G153001 Sobic003G144200--Sobic007G153001 Sobic001G061900--Sobic001G316900 Sobic010G008600 Sobic010G008600 Sobic001G061900--Sobic010G008600 Sobic009G194200 Sobic009G194200 Sobic001G061900--Sobic009G194200 Sobic001G321800 Sobic001G321800 Sobic001G061900--Sobic001G321800 Sobic001G061900--Sobic002G068800 Sobic001G515800 Sobic001G515800 Sobic001G061900--Sobic001G515800 Sobic007G223200 Sobic007G223200 Sobic001G061900--Sobic007G223200 Sobic003G424300 Sobic003G424300 Sobic001G061900--Sobic003G424300 Sobic001G217300 Sobic001G217300 Sobic001G061900--Sobic001G217300 Sobic003G017200--Sobic001G106000 Sobic003G040800 Sobic003G040800 Sobic003G017200--Sobic003G040800 Sobic002G342100 Sobic002G342100 Sobic003G017200--Sobic002G342100 Sobic003G017200--Sobic007G153001 Sobic006G200200 Sobic006G200200 Sobic003G017200--Sobic006G200200 Sobic009G128300 Sobic009G128300 Sobic003G017200--Sobic009G128300 Sobic003G017200--Sobic003G144200 Sobic003G083000 Sobic003G083000 Sobic003G017200--Sobic003G083000 Sobic002G182800 Sobic002G182800 Sobic003G017200--Sobic002G182800 Sobic006G032200 Sobic006G032200 Sobic009G170100--Sobic006G032200 Sobic004G283300 Sobic004G283300 Sobic009G170100--Sobic004G283300 Sobic009G170100--Sobic001G050800 Sobic004G281200 Sobic004G281200 Sobic009G170100--Sobic004G281200 Sobic001G081600 Sobic001G081600 Sobic009G170100--Sobic001G081600 Sobic001G063600 Sobic001G063600 Sobic009G170100--Sobic001G063600 Sobic003G342600 Sobic003G342600 Sobic009G170100--Sobic003G342600 Sobic002G344700 Sobic002G344700 Sobic009G170100--Sobic002G344700 Sobic010G016500 Sobic010G016500 Sobic009G170100--Sobic010G016500 Sobic006G110000--Sobic001G321800 Sobic006G110000--Sobic009G170100 Sobic006G110000--Sobic001G316900 Sobic006G110000--Sobic002G068800 Sobic006G110000--Sobic001G063600 Sobic001G476400 Sobic001G476400 Sobic006G110000--Sobic001G476400 Sobic006G110000--Sobic003G342600 Sobic002G043400 Sobic002G043400 Sobic006G110000--Sobic002G043400 Sobic004G273200 Sobic004G273200 Sobic006G110000--Sobic004G273200 Sobic002G068800--Sobic001G063600 Sobic002G068800--Sobic001G157400 Sobic002G068800--Sobic001G050800 Sobic002G068800--Sobic009G170100 Sobic002G068800--Sobic001G081600 Sobic002G197600 Sobic002G197600 Sobic002G068800--Sobic002G197600 Sobic010G272101 Sobic010G272101 Sobic002G068800--Sobic010G272101 Sobic002G068800--Sobic001G476400 Sobic002G068800--Sobic004G281200 Sobic001G157400--Sobic001G050800 Sobic001G157400--Sobic002G023900 Sobic006G026400 Sobic006G026400 Sobic001G157400--Sobic006G026400 Sobic001G157400--Sobic002G068800 Sobic003G278700 Sobic003G278700 Sobic001G157400--Sobic003G278700 Sobic003G227600 Sobic003G227600 Sobic001G157400--Sobic003G227600 Sobic001G157400--Sobic006G032200 Sobic006G078300 Sobic006G078300 Sobic001G157400--Sobic006G078300 Sobic001G157400--Sobic009G170100 Sobic009G159900--Sobic006G032200 Sobic009G159900--Sobic003G144200 Sobic009G159900--Sobic009G170100 Sobic001G075800 Sobic001G075800 Sobic009G159900--Sobic001G075800 Sobic009G159900--Sobic001G157400 Sobic009G159900--Sobic003G342600 Sobic003G361300 Sobic003G361300 Sobic009G159900--Sobic003G361300 Sobic009G159900--Sobic004G273200 Sobic009G159900--Sobic002G023900 Sobic010G233400 Sobic010G233400 Sobic009G037800--Sobic010G233400 Sobic007G011200 Sobic007G011200 Sobic009G037800--Sobic007G011200 Sobic007G140900 Sobic007G140900 Sobic009G037800--Sobic007G140900 Sobic009G037800--Sobic002G068800 Sobic009G037800--Sobic001G316900 Sobic001G370600 Sobic001G370600 Sobic009G037800--Sobic001G370600 Sobic006G210300 Sobic006G210300 Sobic009G037800--Sobic006G210300 Sobic009G037800--Sobic002G197600 Sobic009G037800--Sobic001G157400
Octagon: transcription factors


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